Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01578

Experiment: monoculture; Experiment B, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 4
1,736,048	+		MIT1002_01577	0.45	+0.3
1,736,056	-		MIT1002_01577	0.45	+0.5
1,736,125	-		MIT1002_01577	0.53	+1.2
1,736,270	-		MIT1002_01577	0.68	-0.7
1,736,294	+		MIT1002_01577	0.71	-1.1
1,736,294	+		MIT1002_01577	0.71	-0.9
1,736,294	+		MIT1002_01577	0.71	-0.3
1,736,294	+		MIT1002_01577	0.71	-0.8
1,736,300	+		MIT1002_01577	0.72	+1.8
1,736,300	+		MIT1002_01577	0.72	+2.5
1,736,302	-		MIT1002_01577	0.72	-2.5
1,736,302	-		MIT1002_01577	0.72	-0.6
1,736,302	-		MIT1002_01577	0.72	+0.3
1,736,308	-		MIT1002_01577	0.72	-0.2
1,736,460	+		MIT1002_01577	0.89	-2.4
1,736,525	-				-0.2
1,736,557	+				+1.1
1,736,595	+				+0.0
1,736,702	+				+0.4
1,736,702	+				-0.8
1,736,702	+				-0.7
1,736,710	-				-0.3
1,736,840	+				+0.3
1,736,840	+				+2.1
1,736,840	+				-1.2
1,736,842	+				+0.8
1,736,862	+				+0.1
1,736,864	+				-0.6
1,736,872	-				-0.2
1,736,872	-				+0.6
1,736,886	+				-0.2
1,736,886	+				+0.4
1,736,892	-				-0.9
1,736,894	-				+0.6
1,736,894	-				-1.8
1,736,894	-				+0.0
1,736,929	-				-0.5
1,736,956	+				+0.3
1,736,986	+				+0.9
1,737,053	-		MIT1002_01578	0.30	-2.1
1,737,077	+		MIT1002_01578	0.44	+0.0
1,737,087	-		MIT1002_01578	0.50	+0.6
1,737,197	-				-1.1
1,737,322	+				+0.3
1,737,345	-				+0.7
1,737,367	+				-0.9
1,737,405	-				-0.3
1,737,405	-				-0.8
1,737,409	+				+0.1
1,737,450	-		MIT1002_01579	0.13	+0.6
1,737,453	+		MIT1002_01579	0.13	+0.6
1,737,474	-		MIT1002_01579	0.15	-0.0
1,737,550	-		MIT1002_01579	0.20	-0.4
1,737,676	-		MIT1002_01579	0.30	-0.7
1,737,699	-		MIT1002_01579	0.32	+1.7
1,737,757	+		MIT1002_01579	0.36	-1.2
1,737,889	-		MIT1002_01579	0.46	-2.8
1,737,895	+		MIT1002_01579	0.46	-0.7
1,737,993	-		MIT1002_01579	0.54	-1.1
1,738,000	+		MIT1002_01579	0.54	-0.2
1,738,010	+		MIT1002_01579	0.55	+0.9
1,738,010	+		MIT1002_01579	0.55	-0.1
1,738,010	+		MIT1002_01579	0.55	-0.7
1,738,010	+		MIT1002_01579	0.55	-0.1
1,738,010	+		MIT1002_01579	0.55	+0.7
1,738,018	-		MIT1002_01579	0.56	+0.2
1,738,018	-		MIT1002_01579	0.56	-1.1
1,738,079	+		MIT1002_01579	0.60	+1.2
1,738,087	-		MIT1002_01579	0.61	-0.2
1,738,087	-		MIT1002_01579	0.61	+0.9
1,738,111	+		MIT1002_01579	0.63	+0.3
1,738,111	+		MIT1002_01579	0.63	+0.1
1,738,111	+		MIT1002_01579	0.63	-0.6
1,738,119	-		MIT1002_01579	0.63	+0.2