Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00459
Experiment: monoculture; Experiment B, time point 4
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 4 |
---|---|---|---|---|---|
remove | |||||
503,175 | + | +0.2 | |||
503,180 | + | -0.3 | |||
504,662 | + | -0.6 | |||
504,662 | + | -0.4 | |||
504,667 | - | -1.7 | |||
504,670 | - | +0.6 | |||
504,670 | - | -0.0 | |||
504,670 | - | +1.5 | |||
504,821 | - | MIT1002_00460 | 0.21 | +0.6 | |
504,887 | - | MIT1002_00460 | 0.35 | +0.3 | |
504,955 | - | MIT1002_00460 | 0.50 | +0.9 | |
504,995 | + | MIT1002_00460 | 0.59 | -0.2 | |
505,157 | - | -2.0 | |||
505,197 | - | -0.5 | |||
505,198 | + | +0.4 | |||
505,307 | - | +0.3 | |||
505,307 | - | -0.5 | |||
505,317 | - | +1.5 | |||
505,343 | + | +0.4 | |||
505,351 | - | -0.4 | |||
505,351 | - | -0.6 | |||
505,431 | - | -1.5 | |||
505,431 | - | +0.6 |
Or see this region's nucleotide sequence