Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS39550 and QEN71_RS39555 overlap by 4 nucleotides QEN71_RS39555 and QEN71_RS39560 overlap by 8 nucleotides QEN71_RS39560 and QEN71_RS39565 overlap by 4 nucleotides QEN71_RS39565 and QEN71_RS39570 are separated by 90 nucleotides
QEN71_RS39550: QEN71_RS39550 - AraC family transcriptional regulator, at 2,261,125 to 2,261,958
_RS39550
QEN71_RS39555: QEN71_RS39555 - NAD(P)H-dependent oxidoreductase, at 2,261,955 to 2,262,677
_RS39555
QEN71_RS39560: QEN71_RS39560 - enoyl-CoA hydratase-related protein, at 2,262,670 to 2,263,404
_RS39560
QEN71_RS39565: QEN71_RS39565 - DUF2000 domain-containing protein, at 2,263,401 to 2,263,937
_RS39565
QEN71_RS39570: QEN71_RS39570 - catalase family peroxidase, at 2,264,028 to 2,265,041
_RS39570
Position (kb)
2262
2263
2264 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2261.998 kb on + strand at 2261.998 kb on + strand at 2262.148 kb on + strand, within QEN71_RS39555 at 2262.289 kb on + strand, within QEN71_RS39555 at 2262.289 kb on + strand, within QEN71_RS39555 at 2262.307 kb on + strand, within QEN71_RS39555 at 2262.308 kb on - strand, within QEN71_RS39555 at 2262.484 kb on + strand, within QEN71_RS39555 at 2262.485 kb on - strand, within QEN71_RS39555 at 2262.494 kb on - strand, within QEN71_RS39555 at 2262.494 kb on - strand, within QEN71_RS39555 at 2262.556 kb on + strand, within QEN71_RS39555 at 2262.557 kb on - strand, within QEN71_RS39555 at 2262.557 kb on - strand, within QEN71_RS39555 at 2262.557 kb on - strand, within QEN71_RS39555 at 2263.055 kb on + strand, within QEN71_RS39560 at 2263.056 kb on - strand, within QEN71_RS39560 at 2263.264 kb on + strand, within QEN71_RS39560 at 2263.264 kb on + strand, within QEN71_RS39560 at 2263.433 kb on + strand at 2263.434 kb on - strand at 2263.474 kb on + strand, within QEN71_RS39565 at 2263.526 kb on - strand, within QEN71_RS39565 at 2263.664 kb on + strand, within QEN71_RS39565 at 2263.664 kb on + strand, within QEN71_RS39565 at 2263.848 kb on + strand, within QEN71_RS39565 at 2263.889 kb on + strand at 2263.889 kb on + strand at 2263.890 kb on - strand at 2263.979 kb on - strand at 2263.979 kb on - strand at 2263.979 kb on - strand at 2264.080 kb on - strand at 2264.136 kb on + strand, within QEN71_RS39570 at 2264.137 kb on - strand, within QEN71_RS39570 at 2264.137 kb on - strand, within QEN71_RS39570 at 2264.173 kb on - strand, within QEN71_RS39570 at 2264.182 kb on - strand, within QEN71_RS39570
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,261,998 + -0.1 2,261,998 + +0.8 2,262,148 + QEN71_RS39555 0.27 +0.7 2,262,289 + QEN71_RS39555 0.46 +0.4 2,262,289 + QEN71_RS39555 0.46 +0.8 2,262,307 + QEN71_RS39555 0.49 +0.2 2,262,308 - QEN71_RS39555 0.49 +0.3 2,262,484 + QEN71_RS39555 0.73 +1.2 2,262,485 - QEN71_RS39555 0.73 +0.7 2,262,494 - QEN71_RS39555 0.75 -0.9 2,262,494 - QEN71_RS39555 0.75 +0.4 2,262,556 + QEN71_RS39555 0.83 -2.3 2,262,557 - QEN71_RS39555 0.83 +0.4 2,262,557 - QEN71_RS39555 0.83 -0.0 2,262,557 - QEN71_RS39555 0.83 +0.5 2,263,055 + QEN71_RS39560 0.52 -0.3 2,263,056 - QEN71_RS39560 0.53 +0.3 2,263,264 + QEN71_RS39560 0.81 +0.2 2,263,264 + QEN71_RS39560 0.81 +0.1 2,263,433 + -0.4 2,263,434 - +0.1 2,263,474 + QEN71_RS39565 0.14 +0.9 2,263,526 - QEN71_RS39565 0.23 -0.0 2,263,664 + QEN71_RS39565 0.49 +0.1 2,263,664 + QEN71_RS39565 0.49 +2.3 2,263,848 + QEN71_RS39565 0.83 +0.9 2,263,889 + -1.1 2,263,889 + +0.1 2,263,890 - -1.2 2,263,979 - +0.5 2,263,979 - -1.1 2,263,979 - -0.4 2,264,080 - -0.6 2,264,136 + QEN71_RS39570 0.11 +0.4 2,264,137 - QEN71_RS39570 0.11 +2.1 2,264,137 - QEN71_RS39570 0.11 -0.1 2,264,173 - QEN71_RS39570 0.14 -0.0 2,264,182 - QEN71_RS39570 0.15 +1.7
Or see this region's nucleotide sequence