Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12755 and QEN71_RS12760 are separated by 422 nucleotides QEN71_RS12760 and QEN71_RS12765 are separated by 73 nucleotides
QEN71_RS12755: QEN71_RS12755 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 2,852,665 to 2,853,567
_RS12755
QEN71_RS12760: QEN71_RS12760 - ectoine hydrolase DoeA, at 2,853,990 to 2,855,210
_RS12760
QEN71_RS12765: QEN71_RS12765 - alcohol dehydrogenase family protein, at 2,855,284 to 2,856,378
_RS12765
Position (kb)
2853
2854
2855
2856 Strain fitness (log2 ratio)
-2
-1
0
1 at 2853.634 kb on - strand at 2853.783 kb on + strand at 2853.784 kb on - strand at 2853.787 kb on + strand at 2853.787 kb on + strand at 2853.834 kb on - strand at 2853.859 kb on - strand at 2853.890 kb on - strand at 2853.930 kb on + strand at 2853.959 kb on - strand at 2854.161 kb on + strand, within QEN71_RS12760 at 2854.180 kb on - strand, within QEN71_RS12760 at 2854.287 kb on - strand, within QEN71_RS12760 at 2854.308 kb on + strand, within QEN71_RS12760 at 2854.308 kb on + strand, within QEN71_RS12760 at 2854.410 kb on + strand, within QEN71_RS12760 at 2854.410 kb on + strand, within QEN71_RS12760 at 2854.530 kb on + strand, within QEN71_RS12760 at 2854.629 kb on + strand, within QEN71_RS12760 at 2854.630 kb on - strand, within QEN71_RS12760 at 2854.797 kb on + strand, within QEN71_RS12760 at 2854.798 kb on - strand, within QEN71_RS12760 at 2854.798 kb on - strand, within QEN71_RS12760 at 2854.824 kb on + strand, within QEN71_RS12760 at 2854.916 kb on + strand, within QEN71_RS12760 at 2854.916 kb on + strand, within QEN71_RS12760 at 2854.916 kb on + strand, within QEN71_RS12760 at 2854.916 kb on + strand, within QEN71_RS12760 at 2855.141 kb on + strand at 2855.142 kb on - strand at 2855.271 kb on + strand at 2855.272 kb on - strand at 2855.272 kb on - strand at 2855.348 kb on - strand at 2855.620 kb on + strand, within QEN71_RS12765 at 2855.656 kb on + strand, within QEN71_RS12765 at 2855.657 kb on - strand, within QEN71_RS12765 at 2855.737 kb on + strand, within QEN71_RS12765 at 2855.738 kb on - strand, within QEN71_RS12765 at 2855.738 kb on - strand, within QEN71_RS12765 at 2855.774 kb on - strand, within QEN71_RS12765 at 2856.098 kb on - strand, within QEN71_RS12765 at 2856.100 kb on - strand, within QEN71_RS12765
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,853,634 - -0.3 2,853,783 + -0.2 2,853,784 - -0.7 2,853,787 + -0.4 2,853,787 + -1.1 2,853,834 - +1.4 2,853,859 - -1.0 2,853,890 - -0.1 2,853,930 + +0.4 2,853,959 - +0.8 2,854,161 + QEN71_RS12760 0.14 +0.2 2,854,180 - QEN71_RS12760 0.16 -2.2 2,854,287 - QEN71_RS12760 0.24 -0.5 2,854,308 + QEN71_RS12760 0.26 -0.6 2,854,308 + QEN71_RS12760 0.26 +1.4 2,854,410 + QEN71_RS12760 0.34 -0.4 2,854,410 + QEN71_RS12760 0.34 +1.0 2,854,530 + QEN71_RS12760 0.44 -0.4 2,854,629 + QEN71_RS12760 0.52 -0.4 2,854,630 - QEN71_RS12760 0.52 +0.7 2,854,797 + QEN71_RS12760 0.66 +0.5 2,854,798 - QEN71_RS12760 0.66 +1.0 2,854,798 - QEN71_RS12760 0.66 -0.4 2,854,824 + QEN71_RS12760 0.68 -0.2 2,854,916 + QEN71_RS12760 0.76 -0.7 2,854,916 + QEN71_RS12760 0.76 -0.9 2,854,916 + QEN71_RS12760 0.76 +0.2 2,854,916 + QEN71_RS12760 0.76 -0.6 2,855,141 + +0.1 2,855,142 - +0.3 2,855,271 + +0.7 2,855,272 - +0.8 2,855,272 - +0.8 2,855,348 - -0.2 2,855,620 + QEN71_RS12765 0.31 +0.4 2,855,656 + QEN71_RS12765 0.34 -1.3 2,855,657 - QEN71_RS12765 0.34 +0.1 2,855,737 + QEN71_RS12765 0.41 -0.9 2,855,738 - QEN71_RS12765 0.41 +0.2 2,855,738 - QEN71_RS12765 0.41 -0.6 2,855,774 - QEN71_RS12765 0.45 -1.1 2,856,098 - QEN71_RS12765 0.74 -0.2 2,856,100 - QEN71_RS12765 0.75 -0.3
Or see this region's nucleotide sequence