Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS01685

Experiment: L-Leucine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntQEN71_RS01680 and QEN71_RS01685 are separated by 33 nucleotidesQEN71_RS01685 and QEN71_RS01690 are separated by 120 nucleotidesQEN71_RS01690 and QEN71_RS01695 are separated by 155 nucleotides QEN71_RS01680: QEN71_RS01680 - histidinol-phosphate transaminase, at 370,012 to 371,091 _RS01680 QEN71_RS01685: QEN71_RS01685 - aminoacyl-tRNA hydrolase, at 371,125 to 371,727 _RS01685 QEN71_RS01690: QEN71_RS01690 - 50S ribosomal protein L25/general stress protein Ctc, at 371,848 to 372,459 _RS01690 QEN71_RS01695: QEN71_RS01695 - ribose-phosphate pyrophosphokinase, at 372,615 to 373,571 _RS01695 Position (kb) 371 372Strain fitness (log2 ratio) -2 -1 0 1 2at 370.178 kb on + strand, within QEN71_RS01680at 370.178 kb on + strand, within QEN71_RS01680at 370.178 kb on + strand, within QEN71_RS01680at 370.178 kb on + strand, within QEN71_RS01680at 370.178 kb on + strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.179 kb on - strand, within QEN71_RS01680at 370.198 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.316 kb on + strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.317 kb on - strand, within QEN71_RS01680at 370.359 kb on - strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.464 kb on + strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.465 kb on - strand, within QEN71_RS01680at 370.488 kb on - strand, within QEN71_RS01680at 370.488 kb on - strand, within QEN71_RS01680at 370.506 kb on + strand, within QEN71_RS01680at 370.506 kb on + strand, within QEN71_RS01680at 370.507 kb on - strand, within QEN71_RS01680at 370.507 kb on - strand, within QEN71_RS01680at 370.507 kb on - strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.532 kb on + strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.533 kb on - strand, within QEN71_RS01680at 370.545 kb on + strand, within QEN71_RS01680at 370.546 kb on - strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.661 kb on + strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.662 kb on - strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.686 kb on + strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.687 kb on - strand, within QEN71_RS01680at 370.709 kb on + strand, within QEN71_RS01680at 370.709 kb on + strand, within QEN71_RS01680at 370.710 kb on - strand, within QEN71_RS01680at 370.721 kb on + strand, within QEN71_RS01680at 370.721 kb on + strand, within QEN71_RS01680at 370.721 kb on + strand, within QEN71_RS01680at 370.721 kb on + strand, within QEN71_RS01680at 370.733 kb on + strand, within QEN71_RS01680at 370.733 kb on + strand, within QEN71_RS01680at 370.734 kb on - strand, within QEN71_RS01680at 370.734 kb on - strand, within QEN71_RS01680at 370.734 kb on - strand, within QEN71_RS01680at 370.734 kb on - strand, within QEN71_RS01680at 370.734 kb on - strand, within QEN71_RS01680at 370.742 kb on + strand, within QEN71_RS01680at 370.742 kb on + strand, within QEN71_RS01680at 370.743 kb on - strand, within QEN71_RS01680at 370.743 kb on - strand, within QEN71_RS01680at 370.743 kb on - strand, within QEN71_RS01680at 370.743 kb on - strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.751 kb on + strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 370.752 kb on - strand, within QEN71_RS01680at 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.048 kb on + strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.049 kb on - strandat 371.766 kb on + strandat 371.767 kb on - strandat 371.767 kb on - strandat 371.806 kb on - strandat 371.806 kb on - strandat 371.850 kb on - strandat 371.850 kb on - strandat 371.850 kb on - strandat 371.850 kb on - strandat 371.850 kb on - strandat 372.115 kb on - strand, within QEN71_RS01690at 372.612 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strandat 372.617 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
remove
370,178 + QEN71_RS01680 0.15 -0.1
370,178 + QEN71_RS01680 0.15 +0.4
370,178 + QEN71_RS01680 0.15 -0.2
370,178 + QEN71_RS01680 0.15 -0.7
370,178 + QEN71_RS01680 0.15 +0.7
370,179 - QEN71_RS01680 0.15 -2.1
370,179 - QEN71_RS01680 0.15 +0.5
370,179 - QEN71_RS01680 0.15 -0.6
370,179 - QEN71_RS01680 0.15 -1.2
370,179 - QEN71_RS01680 0.15 +0.1
370,179 - QEN71_RS01680 0.15 -0.3
370,179 - QEN71_RS01680 0.15 -0.1
370,179 - QEN71_RS01680 0.15 -0.4
370,179 - QEN71_RS01680 0.15 -0.4
370,198 + QEN71_RS01680 0.17 -0.3
370,316 + QEN71_RS01680 0.28 +0.2
370,316 + QEN71_RS01680 0.28 +0.4
370,316 + QEN71_RS01680 0.28 -2.5
370,316 + QEN71_RS01680 0.28 -0.6
370,316 + QEN71_RS01680 0.28 +1.5
370,316 + QEN71_RS01680 0.28 -0.1
370,316 + QEN71_RS01680 0.28 +0.1
370,316 + QEN71_RS01680 0.28 +0.0
370,316 + QEN71_RS01680 0.28 +0.6
370,316 + QEN71_RS01680 0.28 -0.5
370,316 + QEN71_RS01680 0.28 -0.4
370,316 + QEN71_RS01680 0.28 -0.4
370,317 - QEN71_RS01680 0.28 -0.4
370,317 - QEN71_RS01680 0.28 -0.6
370,317 - QEN71_RS01680 0.28 -0.6
370,317 - QEN71_RS01680 0.28 +0.6
370,317 - QEN71_RS01680 0.28 +0.3
370,317 - QEN71_RS01680 0.28 -1.3
370,317 - QEN71_RS01680 0.28 +0.2
370,359 - QEN71_RS01680 0.32 +0.4
370,464 + QEN71_RS01680 0.42 -0.5
370,464 + QEN71_RS01680 0.42 +0.2
370,464 + QEN71_RS01680 0.42 +0.3
370,464 + QEN71_RS01680 0.42 -0.4
370,464 + QEN71_RS01680 0.42 +0.2
370,464 + QEN71_RS01680 0.42 +0.1
370,464 + QEN71_RS01680 0.42 -1.1
370,464 + QEN71_RS01680 0.42 +0.6
370,464 + QEN71_RS01680 0.42 +0.3
370,464 + QEN71_RS01680 0.42 -0.4
370,465 - QEN71_RS01680 0.42 -0.5
370,465 - QEN71_RS01680 0.42 +0.9
370,465 - QEN71_RS01680 0.42 -0.2
370,465 - QEN71_RS01680 0.42 +0.2
370,465 - QEN71_RS01680 0.42 -0.1
370,465 - QEN71_RS01680 0.42 -1.2
370,465 - QEN71_RS01680 0.42 +0.4
370,465 - QEN71_RS01680 0.42 +0.0
370,465 - QEN71_RS01680 0.42 +0.1
370,465 - QEN71_RS01680 0.42 +0.8
370,465 - QEN71_RS01680 0.42 +0.0
370,465 - QEN71_RS01680 0.42 +0.0
370,488 - QEN71_RS01680 0.44 +1.0
370,488 - QEN71_RS01680 0.44 +0.2
370,506 + QEN71_RS01680 0.46 -2.6
370,506 + QEN71_RS01680 0.46 -0.4
370,507 - QEN71_RS01680 0.46 -0.9
370,507 - QEN71_RS01680 0.46 +0.1
370,507 - QEN71_RS01680 0.46 +0.3
370,532 + QEN71_RS01680 0.48 -0.2
370,532 + QEN71_RS01680 0.48 +0.5
370,532 + QEN71_RS01680 0.48 +0.0
370,532 + QEN71_RS01680 0.48 +1.0
370,532 + QEN71_RS01680 0.48 +0.2
370,532 + QEN71_RS01680 0.48 +0.4
370,532 + QEN71_RS01680 0.48 +0.9
370,532 + QEN71_RS01680 0.48 -0.1
370,532 + QEN71_RS01680 0.48 -0.6
370,532 + QEN71_RS01680 0.48 -2.4
370,532 + QEN71_RS01680 0.48 +1.3
370,532 + QEN71_RS01680 0.48 -0.6
370,532 + QEN71_RS01680 0.48 +1.1
370,533 - QEN71_RS01680 0.48 +0.0
370,533 - QEN71_RS01680 0.48 -0.1
370,533 - QEN71_RS01680 0.48 -0.1
370,533 - QEN71_RS01680 0.48 -0.4
370,533 - QEN71_RS01680 0.48 -0.1
370,533 - QEN71_RS01680 0.48 +1.5
370,533 - QEN71_RS01680 0.48 -0.8
370,533 - QEN71_RS01680 0.48 +0.5
370,533 - QEN71_RS01680 0.48 -0.4
370,533 - QEN71_RS01680 0.48 +0.9
370,533 - QEN71_RS01680 0.48 -0.8
370,533 - QEN71_RS01680 0.48 -0.1
370,545 + QEN71_RS01680 0.49 -0.1
370,546 - QEN71_RS01680 0.49 -0.7
370,661 + QEN71_RS01680 0.60 -0.5
370,661 + QEN71_RS01680 0.60 +2.3
370,661 + QEN71_RS01680 0.60 +0.6
370,661 + QEN71_RS01680 0.60 -0.3
370,661 + QEN71_RS01680 0.60 -0.0
370,661 + QEN71_RS01680 0.60 -0.7
370,661 + QEN71_RS01680 0.60 +0.1
370,662 - QEN71_RS01680 0.60 -0.4
370,662 - QEN71_RS01680 0.60 -0.1
370,662 - QEN71_RS01680 0.60 +0.7
370,662 - QEN71_RS01680 0.60 +0.4
370,662 - QEN71_RS01680 0.60 -0.6
370,662 - QEN71_RS01680 0.60 +0.8
370,662 - QEN71_RS01680 0.60 -0.3
370,662 - QEN71_RS01680 0.60 -0.4
370,686 + QEN71_RS01680 0.62 -0.6
370,686 + QEN71_RS01680 0.62 +0.6
370,686 + QEN71_RS01680 0.62 -0.2
370,686 + QEN71_RS01680 0.62 -1.1
370,686 + QEN71_RS01680 0.62 -1.4
370,686 + QEN71_RS01680 0.62 -0.4
370,686 + QEN71_RS01680 0.62 +1.1
370,686 + QEN71_RS01680 0.62 -0.5
370,686 + QEN71_RS01680 0.62 -1.4
370,687 - QEN71_RS01680 0.62 -0.4
370,687 - QEN71_RS01680 0.62 -0.4
370,687 - QEN71_RS01680 0.62 -1.0
370,687 - QEN71_RS01680 0.62 +0.0
370,687 - QEN71_RS01680 0.62 -0.9
370,687 - QEN71_RS01680 0.62 +0.3
370,709 + QEN71_RS01680 0.65 -0.2
370,709 + QEN71_RS01680 0.65 +0.4
370,710 - QEN71_RS01680 0.65 -0.1
370,721 + QEN71_RS01680 0.66 -0.3
370,721 + QEN71_RS01680 0.66 +0.6
370,721 + QEN71_RS01680 0.66 -0.9
370,721 + QEN71_RS01680 0.66 -0.9
370,733 + QEN71_RS01680 0.67 +0.4
370,733 + QEN71_RS01680 0.67 +0.5
370,734 - QEN71_RS01680 0.67 +0.6
370,734 - QEN71_RS01680 0.67 +0.3
370,734 - QEN71_RS01680 0.67 -1.2
370,734 - QEN71_RS01680 0.67 -0.8
370,734 - QEN71_RS01680 0.67 -0.6
370,742 + QEN71_RS01680 0.68 -0.4
370,742 + QEN71_RS01680 0.68 -0.4
370,743 - QEN71_RS01680 0.68 +2.5
370,743 - QEN71_RS01680 0.68 +0.2
370,743 - QEN71_RS01680 0.68 -0.1
370,743 - QEN71_RS01680 0.68 +0.1
370,751 + QEN71_RS01680 0.68 -0.1
370,751 + QEN71_RS01680 0.68 -0.6
370,751 + QEN71_RS01680 0.68 +0.2
370,751 + QEN71_RS01680 0.68 -0.1
370,751 + QEN71_RS01680 0.68 +0.9
370,751 + QEN71_RS01680 0.68 -0.2
370,751 + QEN71_RS01680 0.68 +1.2
370,751 + QEN71_RS01680 0.68 +0.0
370,751 + QEN71_RS01680 0.68 -0.1
370,751 + QEN71_RS01680 0.68 +0.8
370,751 + QEN71_RS01680 0.68 +0.3
370,751 + QEN71_RS01680 0.68 -0.0
370,751 + QEN71_RS01680 0.68 -1.4
370,751 + QEN71_RS01680 0.68 +0.0
370,751 + QEN71_RS01680 0.68 +0.2
370,751 + QEN71_RS01680 0.68 -0.2
370,751 + QEN71_RS01680 0.68 -0.3
370,751 + QEN71_RS01680 0.68 -0.2
370,751 + QEN71_RS01680 0.68 -0.2
370,751 + QEN71_RS01680 0.68 +1.4
370,751 + QEN71_RS01680 0.68 -0.4
370,751 + QEN71_RS01680 0.68 -0.8
370,751 + QEN71_RS01680 0.68 +0.4
370,752 - QEN71_RS01680 0.69 -0.1
370,752 - QEN71_RS01680 0.69 -1.0
370,752 - QEN71_RS01680 0.69 +0.7
370,752 - QEN71_RS01680 0.69 -0.1
370,752 - QEN71_RS01680 0.69 -0.6
370,752 - QEN71_RS01680 0.69 +0.5
370,752 - QEN71_RS01680 0.69 +0.4
370,752 - QEN71_RS01680 0.69 -0.8
370,752 - QEN71_RS01680 0.69 +0.4
370,752 - QEN71_RS01680 0.69 +0.4
370,752 - QEN71_RS01680 0.69 +0.4
370,752 - QEN71_RS01680 0.69 +2.5
370,752 - QEN71_RS01680 0.69 -0.5
370,752 - QEN71_RS01680 0.69 +0.2
370,752 - QEN71_RS01680 0.69 +0.5
370,752 - QEN71_RS01680 0.69 +0.1
370,752 - QEN71_RS01680 0.69 +0.2
370,752 - QEN71_RS01680 0.69 -1.6
371,048 + +0.4
371,048 + +1.9
371,048 + +0.0
371,048 + +0.1
371,048 + +0.1
371,048 + -0.6
371,048 + +0.7
371,048 + -0.1
371,049 - +0.4
371,049 - -1.2
371,049 - -0.7
371,049 - -1.0
371,049 - +1.1
371,049 - -0.0
371,049 - -0.5
371,766 + -1.4
371,767 - -0.2
371,767 - +0.1
371,806 - +0.6
371,806 - +0.7
371,850 - -0.5
371,850 - -0.5
371,850 - -0.2
371,850 - -0.4
371,850 - +1.2
372,115 - QEN71_RS01690 0.44 +1.0
372,612 - -0.6
372,617 - -0.3
372,617 - -1.1
372,617 - -0.0
372,617 - -0.9
372,617 - -0.2
372,617 - -0.4
372,617 - +0.1
372,617 - -0.1

Or see this region's nucleotide sequence