Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03466

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,874,904	+				-0.4
3,874,912	-				-1.0
3,874,940	-				+0.2
3,874,947	+				-1.1
3,875,000	+				-2.2
3,875,001	+				-0.9
3,875,122	-		MIT1002_03465	0.16	-2.8
3,875,147	-		MIT1002_03465	0.19	-1.4
3,875,159	+		MIT1002_03465	0.20	+0.0
3,875,184	-		MIT1002_03465	0.23	+1.3
3,875,224	-		MIT1002_03465	0.28	-0.8
3,875,224	-		MIT1002_03465	0.28	-0.2
3,875,316	-		MIT1002_03465	0.39	+0.4
3,875,381	-		MIT1002_03465	0.46	+0.5
3,875,390	+		MIT1002_03465	0.47	-1.2
3,875,398	-		MIT1002_03465	0.48	-0.8
3,875,414	+		MIT1002_03465	0.50	+0.4
3,875,414	+		MIT1002_03465	0.50	+0.3
3,875,422	-		MIT1002_03465	0.51	-1.1
3,875,422	-		MIT1002_03465	0.51	+0.1
3,875,441	+		MIT1002_03465	0.53	+0.0
3,875,441	+		MIT1002_03465	0.53	+0.5
3,875,449	-		MIT1002_03465	0.54	-1.0
3,875,512	-		MIT1002_03465	0.62	+0.8
3,875,638	-		MIT1002_03465	0.76	-0.6
3,875,645	-		MIT1002_03465	0.77	-1.3
3,875,650	-		MIT1002_03465	0.78	+2.2
3,875,655	-		MIT1002_03465	0.78	-0.8
3,875,700	+		MIT1002_03465	0.84	-0.3
3,875,700	+		MIT1002_03465	0.84	+1.1
3,875,700	+		MIT1002_03465	0.84	+0.7
3,875,700	+		MIT1002_03465	0.84	+0.2
3,875,705	+		MIT1002_03465	0.84	-0.2
3,875,705	+		MIT1002_03465	0.84	+1.7
3,875,705	+		MIT1002_03465	0.84	-0.4
3,875,708	-		MIT1002_03465	0.85	-1.3
3,875,713	-		MIT1002_03465	0.85	-1.2
3,875,713	-		MIT1002_03465	0.85	-0.4
3,875,713	-		MIT1002_03465	0.85	+1.2
3,875,713	-		MIT1002_03465	0.85	+2.1
3,875,713	-		MIT1002_03465	0.85	+0.7
3,875,713	-		MIT1002_03465	0.85	-0.6
3,875,718	-		MIT1002_03465	0.86	-0.5
3,875,741	+		MIT1002_03465	0.89	-0.6
3,875,802	+				-0.2
3,875,812	+				-1.0
3,875,895	-				-1.7
3,875,948	+		MIT1002_03466	0.12	+0.1
3,876,007	-		MIT1002_03466	0.27	+1.1
3,876,029	+		MIT1002_03466	0.32	-0.5
3,876,069	+		MIT1002_03466	0.41	+0.2
3,876,131	+		MIT1002_03466	0.56	+1.4
3,876,182	-		MIT1002_03466	0.69	+0.8
3,876,207	+		MIT1002_03466	0.75	+0.6
3,876,209	+		MIT1002_03466	0.75	-1.5
3,876,280	+				-0.1
3,876,317	+				-0.9
3,876,434	+				+1.1
3,876,439	-				-0.2
3,876,442	-				+2.1
3,876,449	+				-0.1
3,876,449	+				-2.1
3,876,451	+				+0.2
3,876,451	+				+0.7
3,876,457	-				+0.4
3,876,457	-				+0.4
3,876,459	-				+0.0
3,876,459	-				-2.7
3,876,544	-		MIT1002_03467	0.18	+2.0
3,876,570	-		MIT1002_03467	0.21	-0.5
3,876,579	+		MIT1002_03467	0.23	+2.7
3,876,603	-		MIT1002_03467	0.26	-0.5
3,876,633	-		MIT1002_03467	0.30	+1.3
3,876,655	+		MIT1002_03467	0.33	-2.4
3,876,755	+		MIT1002_03467	0.47	-1.7
3,876,809	+		MIT1002_03467	0.54	+0.6
3,876,810	+		MIT1002_03467	0.54	+0.2
3,876,816	+		MIT1002_03467	0.55	-1.1
3,876,818	-		MIT1002_03467	0.55	+0.2
3,876,824	-		MIT1002_03467	0.56	-1.1
3,876,834	+		MIT1002_03467	0.57	-0.7
3,876,886	+		MIT1002_03467	0.64	+0.9
3,876,888	+		MIT1002_03467	0.65	-1.7
3,876,888	+		MIT1002_03467	0.65	+0.7
3,876,894	-		MIT1002_03467	0.66	+1.2
3,876,896	-		MIT1002_03467	0.66	-0.9
3,876,922	-		MIT1002_03467	0.69	+0.6
3,876,932	-		MIT1002_03467	0.71	+1.2
3,877,046	+		MIT1002_03467	0.86	+0.4
3,877,104	+				-1.2
3,877,104	+				-0.8
3,877,104	+				-1.6
3,877,122	-				+0.1
3,877,122	-				-0.7
3,877,258	-		MIT1002_03468	0.10	+1.8
3,877,274	-		MIT1002_03468	0.12	+1.8
3,877,300	-		MIT1002_03468	0.14	+1.4