Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03390

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,791,333	+		MIT1002_03389	0.16	-1.0
3,791,382	+		MIT1002_03389	0.20	+0.3
3,791,385	+		MIT1002_03389	0.20	-1.2
3,791,473	+		MIT1002_03389	0.28	-1.2
3,791,473	+		MIT1002_03389	0.28	+1.2
3,791,497	+		MIT1002_03389	0.30	-2.1
3,791,503	+		MIT1002_03389	0.31	+1.7
3,791,578	+		MIT1002_03389	0.37	-0.7
3,791,603	+		MIT1002_03389	0.39	-1.5
3,791,621	-		MIT1002_03389	0.41	+0.3
3,791,628	-		MIT1002_03389	0.41	+0.3
3,791,639	+		MIT1002_03389	0.42	-0.1
3,791,695	-		MIT1002_03389	0.47	-3.3
3,791,719	-		MIT1002_03389	0.49	+0.6
3,791,743	+		MIT1002_03389	0.51	-0.2
3,791,749	-		MIT1002_03389	0.52	-0.1
3,791,749	-		MIT1002_03389	0.52	+1.9
3,791,749	-		MIT1002_03389	0.52	-0.3
3,791,769	+		MIT1002_03389	0.53	-1.0
3,791,777	+		MIT1002_03389	0.54	-3.1
3,791,777	+		MIT1002_03389	0.54	+0.5
3,791,777	+		MIT1002_03389	0.54	-0.3
3,791,785	-		MIT1002_03389	0.55	+1.3
3,791,785	-		MIT1002_03389	0.55	+0.3
3,791,815	+		MIT1002_03389	0.57	+0.1
3,791,815	+		MIT1002_03389	0.57	-1.1
3,791,823	-		MIT1002_03389	0.58	+0.4
3,791,823	-		MIT1002_03389	0.58	-1.2
3,791,851	+		MIT1002_03389	0.60	+0.1
3,791,851	+		MIT1002_03389	0.60	-0.3
3,791,851	+		MIT1002_03389	0.60	-2.2
3,791,851	+		MIT1002_03389	0.60	+0.1
3,791,859	-		MIT1002_03389	0.61	-0.4
3,791,859	-		MIT1002_03389	0.61	+0.7
3,791,859	-		MIT1002_03389	0.61	+1.0
3,791,861	+		MIT1002_03389	0.61	+1.7
3,791,869	-		MIT1002_03389	0.62	-0.2
3,791,869	-		MIT1002_03389	0.62	+0.3
3,791,886	+		MIT1002_03389	0.63	-1.0
3,791,886	+		MIT1002_03389	0.63	+0.2
3,791,890	-		MIT1002_03389	0.64	-0.6
3,791,930	-		MIT1002_03389	0.67	-0.1
3,792,001	+		MIT1002_03389	0.73	+1.4
3,792,048	+		MIT1002_03389	0.77	+0.2
3,792,064	+		MIT1002_03389	0.79	-1.0
3,792,073	+		MIT1002_03389	0.79	-0.9
3,792,073	+		MIT1002_03389	0.79	+0.2
3,792,073	+		MIT1002_03389	0.79	-0.3
3,792,081	-		MIT1002_03389	0.80	-0.8
3,792,081	-		MIT1002_03389	0.80	+0.3
3,792,081	-		MIT1002_03389	0.80	-0.4
3,792,081	-		MIT1002_03389	0.80	-0.3
3,792,081	-		MIT1002_03389	0.80	-1.4
3,792,103	+		MIT1002_03389	0.82	+0.9
3,792,117	-		MIT1002_03389	0.83	+0.6
3,792,126	+		MIT1002_03389	0.84	-0.1
3,792,158	+		MIT1002_03389	0.87	-1.4
3,792,166	-		MIT1002_03389	0.87	-1.0
3,792,176	+		MIT1002_03389	0.88	-2.8
3,792,188	+		MIT1002_03389	0.89	+0.2
3,792,188	+		MIT1002_03389	0.89	+0.0
3,792,188	+		MIT1002_03389	0.89	-0.6
3,792,196	-				+0.2
3,792,200	+				-0.5
3,792,201	+				-0.5
3,792,201	+				-0.8
3,792,201	+				+0.1
3,792,210	+				-0.8
3,792,264	+				-1.3
3,792,301	+				+2.4
3,792,301	+				-0.5
3,792,301	+				+0.5
3,792,301	+				+0.7
3,792,301	+				+1.0
3,792,301	+				+1.8
3,792,301	+				-0.2
3,792,301	+				+0.2
3,792,301	+				+0.9
3,792,305	-				-0.2
3,792,309	-				-1.1
3,792,309	-				-0.2
3,792,309	-				-0.1
3,792,309	-				+1.4
3,792,309	-				-0.9
3,792,309	-				-1.7
3,792,309	-				-0.4
3,792,309	-				-0.3
3,792,309	-				+1.5
3,792,309	-				+0.6
3,792,309	-				+0.6
3,792,309	-				+1.1
3,792,309	-				+0.1
3,792,309	-				-0.2
3,792,309	-				+0.4
3,792,309	-				+0.0
3,792,345	-				+0.6
3,792,380	+				-0.3
3,792,388	-				-0.6
3,792,408	-		MIT1002_03390	0.12	+0.2
3,792,451	+		MIT1002_03390	0.18	+1.8
3,792,451	+		MIT1002_03390	0.18	+0.1
3,792,451	+		MIT1002_03390	0.18	-1.4
3,792,459	-		MIT1002_03390	0.19	-2.7
3,792,459	-		MIT1002_03390	0.19	-0.1
3,792,459	-		MIT1002_03390	0.19	-0.1
3,792,510	+		MIT1002_03390	0.27	+0.3
3,792,548	-		MIT1002_03390	0.32	+0.6
3,792,553	+		MIT1002_03390	0.33	+0.4
3,792,595	+		MIT1002_03390	0.39	-0.1
3,792,691	+		MIT1002_03390	0.54	+1.0
3,792,699	-		MIT1002_03390	0.55	-0.0
3,792,699	-		MIT1002_03390	0.55	-0.8
3,792,699	-		MIT1002_03390	0.55	+0.9
3,792,737	-		MIT1002_03390	0.61	+2.4
3,792,745	+		MIT1002_03390	0.62	-0.6
3,792,753	+		MIT1002_03390	0.63	-1.7
3,792,753	-		MIT1002_03390	0.63	-0.4
3,792,755	+		MIT1002_03390	0.63	-0.9
3,792,759	+		MIT1002_03390	0.64	+0.6
3,792,759	+		MIT1002_03390	0.64	+0.8
3,792,767	-		MIT1002_03390	0.65	-0.6
3,792,767	-		MIT1002_03390	0.65	-0.9
3,792,777	-		MIT1002_03390	0.67	-0.3
3,792,846	-		MIT1002_03390	0.77	+1.6
3,792,849	+		MIT1002_03390	0.77	+0.0
3,792,905	-		MIT1002_03390	0.86	-1.6
3,792,906	+		MIT1002_03390	0.86	+0.6
3,793,201	+				-0.4
3,793,210	-				-0.1
3,793,212	+				+0.3
3,793,220	-				+0.8
3,793,223	-				+0.0
3,793,223	-				-1.2
3,793,269	-		MIT1002_03391	0.15	+1.8
3,793,285	+		MIT1002_03391	0.17	-1.7
3,793,292	+		MIT1002_03391	0.17	+1.2
3,793,292	+		MIT1002_03391	0.17	-1.3
3,793,292	+		MIT1002_03391	0.17	+0.6
3,793,292	+		MIT1002_03391	0.17	+0.7
3,793,292	+		MIT1002_03391	0.17	-0.8
3,793,292	+		MIT1002_03391	0.17	-0.7
3,793,292	+		MIT1002_03391	0.17	-1.2
3,793,294	+		MIT1002_03391	0.18	-1.0
3,793,294	+		MIT1002_03391	0.18	-0.4
3,793,300	-		MIT1002_03391	0.18	+0.4
3,793,300	-		MIT1002_03391	0.18	-0.7
3,793,300	-		MIT1002_03391	0.18	-1.1
3,793,300	-		MIT1002_03391	0.18	-0.0
3,793,300	-		MIT1002_03391	0.18	+0.3
3,793,300	-		MIT1002_03391	0.18	+1.6
3,793,302	-		MIT1002_03391	0.18	+0.2
3,793,518	-		MIT1002_03391	0.43	-0.1
3,793,520	+		MIT1002_03391	0.43	-1.2
3,793,530	-		MIT1002_03391	0.45	+0.1
3,793,533	+		MIT1002_03391	0.45	+0.2
3,793,572	-		MIT1002_03391	0.49	-1.0
3,793,573	-		MIT1002_03391	0.49	-0.7
3,793,753	+		MIT1002_03391	0.70	+1.4
3,793,761	-		MIT1002_03391	0.71	+0.4
3,793,761	-		MIT1002_03391	0.71	+0.4
3,793,786	-		MIT1002_03391	0.74	-1.0