Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03378

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,779,035	-				+0.1
3,779,045	-				-0.6
3,779,104	+				+2.8
3,779,146	+				-0.3
3,779,156	+				+1.1
3,779,163	+				-0.2
3,779,164	-				-0.4
3,779,171	-				-0.3
3,779,171	-				+0.9
3,779,259	+		MIT1002_03377	0.18	+0.4
3,779,259	+		MIT1002_03377	0.18	-0.5
3,779,261	+		MIT1002_03377	0.19	+1.7
3,779,270	+		MIT1002_03377	0.20	+0.2
3,779,278	-		MIT1002_03377	0.20	+0.0
3,779,355	+		MIT1002_03377	0.29	-1.2
3,779,365	+		MIT1002_03377	0.30	-0.2
3,779,373	-		MIT1002_03377	0.31	-2.3
3,779,423	-		MIT1002_03377	0.36	+0.2
3,779,581	-		MIT1002_03377	0.54	+0.4
3,779,699	-		MIT1002_03377	0.67	-0.5
3,779,730	+		MIT1002_03377	0.70	+0.0
3,779,733	-		MIT1002_03377	0.71	-1.0
3,779,733	-		MIT1002_03377	0.71	-1.1
3,779,738	-		MIT1002_03377	0.71	-0.1
3,779,738	-		MIT1002_03377	0.71	-0.4
3,779,740	+		MIT1002_03377	0.71	+0.5
3,779,740	+		MIT1002_03377	0.71	-0.2
3,779,740	+		MIT1002_03377	0.71	+0.2
3,779,740	+		MIT1002_03377	0.71	-0.5
3,779,748	-		MIT1002_03377	0.72	-0.8
3,779,800	-		MIT1002_03377	0.78	-1.3
3,779,800	-		MIT1002_03377	0.78	+1.3
3,779,802	-		MIT1002_03377	0.78	+0.4
3,779,810	-		MIT1002_03377	0.79	-0.8
3,779,827	-		MIT1002_03377	0.81	-1.2
3,779,873	+		MIT1002_03377	0.86	-0.1
3,779,914	-				-0.1
3,779,916	+				+0.3
3,779,924	-				+0.5
3,779,924	-				+0.9
3,779,950	+				-0.4
3,779,960	+				+0.8
3,780,002	-				-0.2
3,780,768	-				-3.2