Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03267

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,636,994	+		MIT1002_03265	0.49	+0.8
3,637,002	+		MIT1002_03265	0.50	+0.3
3,637,002	+		MIT1002_03265	0.50	+2.6
3,637,002	+		MIT1002_03265	0.50	+0.5
3,637,002	+		MIT1002_03265	0.50	-0.4
3,637,003	-		MIT1002_03265	0.50	-0.8
3,637,003	-		MIT1002_03265	0.50	+0.5
3,637,010	-		MIT1002_03265	0.51	+0.7
3,637,081	-		MIT1002_03265	0.59	+1.4
3,637,081	-		MIT1002_03265	0.59	+0.3
3,637,085	-		MIT1002_03265	0.60	-0.2
3,637,096	+		MIT1002_03265	0.61	-0.1
3,637,116	+		MIT1002_03265	0.63	+0.2
3,637,124	+		MIT1002_03265	0.64	-0.4
3,637,147	-		MIT1002_03265	0.67	+0.2
3,637,170	+		MIT1002_03265	0.70	-0.4
3,637,198	+		MIT1002_03265	0.73	+0.0
3,637,305	+		MIT1002_03265	0.85	-1.0
3,637,313	-		MIT1002_03265	0.86	+0.2
3,637,337	+		MIT1002_03265	0.89	+1.4
3,637,388	+				+0.9
3,637,396	-				+0.0
3,637,400	+				-0.5
3,637,408	-				-1.7
3,637,426	+				-1.2
3,637,426	+				+1.5
3,637,426	+				+0.3
3,637,426	+				-0.1
3,637,426	+				+0.1
3,637,426	+				-0.2
3,637,426	+				-0.5
3,637,434	+				+0.8
3,637,434	+				-1.0
3,637,434	-				+0.4
3,637,434	-				+0.1
3,637,442	-				+0.3
3,637,458	+				+0.2
3,637,458	+				+0.7
3,637,458	+				-1.2
3,637,458	+				+1.3
3,637,458	+				+0.4
3,637,458	+				+0.2
3,637,458	+				+0.4
3,637,458	+				-0.7
3,637,466	-				-0.4
3,637,466	-				-1.0
3,637,466	-				+0.0
3,637,466	-				+0.3
3,637,466	-				+0.9
3,637,466	-				-0.2
3,637,466	-				+0.7
3,637,466	-				-0.5
3,637,466	-				-0.9
3,637,466	-				+1.5
3,637,466	-				+2.0
3,637,466	-				-1.1
3,637,466	-				+0.1
3,637,478	+				+0.8
3,637,504	-		MIT1002_03266	0.12	-0.5
3,637,513	-		MIT1002_03266	0.14	-0.3
3,637,522	+		MIT1002_03266	0.16	-1.2
3,637,525	-		MIT1002_03266	0.17	+0.6
3,637,541	-		MIT1002_03266	0.20	-0.7
3,637,572	+		MIT1002_03266	0.27	-2.7
3,637,580	-		MIT1002_03266	0.29	-1.7
3,637,718	-		MIT1002_03266	0.60	-0.3
3,637,852	-				+0.4
3,637,879	+				-0.9
3,637,879	-				+0.8
3,637,879	-				-0.3
3,637,964	-				-0.4
3,637,982	-				+1.9
3,638,004	+				-0.3
3,638,009	+				+0.1
3,638,035	+				+1.3
3,638,040	-				+0.2
3,638,158	+		MIT1002_03267	0.13	-0.7
3,638,160	+		MIT1002_03267	0.14	-0.7
3,638,160	+		MIT1002_03267	0.14	-0.3
3,638,160	+		MIT1002_03267	0.14	+0.5
3,638,166	-		MIT1002_03267	0.14	+0.5
3,638,168	-		MIT1002_03267	0.14	-1.8
3,638,216	+		MIT1002_03267	0.16	-0.3
3,638,238	-		MIT1002_03267	0.18	+1.3
3,638,256	+		MIT1002_03267	0.19	+1.1
3,638,308	-		MIT1002_03267	0.21	+0.5
3,638,330	+		MIT1002_03267	0.23	-1.9
3,638,330	+		MIT1002_03267	0.23	-2.6
3,638,338	-		MIT1002_03267	0.23	+0.1
3,638,338	-		MIT1002_03267	0.23	-0.4
3,638,338	-		MIT1002_03267	0.23	+0.3
3,638,350	-		MIT1002_03267	0.24	-0.6
3,638,397	+		MIT1002_03267	0.26	-0.5
3,638,491	+		MIT1002_03267	0.31	+1.3
3,638,491	+		MIT1002_03267	0.31	-0.5
3,638,491	+		MIT1002_03267	0.31	+0.5
3,638,499	-		MIT1002_03267	0.31	-0.6
3,638,499	-		MIT1002_03267	0.31	-1.1
3,638,520	+		MIT1002_03267	0.33	+0.1
3,638,520	+		MIT1002_03267	0.33	-0.7
3,638,530	-		MIT1002_03267	0.33	+0.0
3,638,698	+		MIT1002_03267	0.42	-0.5
3,638,763	-		MIT1002_03267	0.45	+1.0
3,638,787	+		MIT1002_03267	0.47	-0.7
3,638,797	-		MIT1002_03267	0.47	+1.7
3,638,797	-		MIT1002_03267	0.47	+0.2
3,638,802	-		MIT1002_03267	0.48	-0.4
3,638,807	-		MIT1002_03267	0.48	+0.7
3,638,813	+		MIT1002_03267	0.48	-1.5
3,638,813	+		MIT1002_03267	0.48	-0.1
3,638,865	+		MIT1002_03267	0.51	+0.6
3,638,951	-		MIT1002_03267	0.55	-1.1
3,638,994	-		MIT1002_03267	0.58	-0.4
3,639,010	-		MIT1002_03267	0.59	+0.3
3,639,065	+		MIT1002_03267	0.61	+0.0
3,639,065	+		MIT1002_03267	0.61	+0.0
3,639,073	-		MIT1002_03267	0.62	+0.8
3,639,073	-		MIT1002_03267	0.62	+0.9
3,639,097	+		MIT1002_03267	0.63	-0.5
3,639,105	-		MIT1002_03267	0.64	-0.8
3,639,143	+		MIT1002_03267	0.66	+0.5
3,639,260	+		MIT1002_03267	0.72	-0.0
3,639,260	+		MIT1002_03267	0.72	-0.8
3,639,260	+		MIT1002_03267	0.72	+0.3
3,639,260	+		MIT1002_03267	0.72	-2.4
3,639,268	-		MIT1002_03267	0.72	+0.3
3,639,268	-		MIT1002_03267	0.72	+0.3
3,639,393	+		MIT1002_03267	0.79	+3.2
3,639,447	-		MIT1002_03267	0.82	+0.3
3,639,490	-		MIT1002_03267	0.84	+1.3
3,639,490	-		MIT1002_03267	0.84	-0.4
3,639,693	+				+0.9
3,639,711	-				+2.3
3,639,757	+				+0.7
3,639,779	-				+0.0
3,639,851	+				-0.2
3,639,859	-				+0.5
3,639,861	+				-2.0
3,639,888	+				+1.1
3,639,893	+				+0.2
3,639,893	+				-3.1
3,639,896	-				-0.5
3,639,901	-				-0.9
3,639,901	-				-0.7
3,639,924	+				+0.5
3,639,924	+				+0.5
3,639,932	-				+6.2
3,639,966	+				+0.3
3,640,059	+				-0.0
3,640,059	+				-0.4
3,640,127	+				+0.6
3,640,127	+				-0.2
3,640,155	-				+0.6
3,640,224	+				-1.4
3,640,253	+				-0.7
3,640,261	-				+0.4
3,640,261	-				+0.7
3,640,311	+				+1.9
3,640,320	+				-1.6
3,640,328	-				-0.3
3,640,352	-				+0.2
3,640,408	+		MIT1002_03268	0.15	-0.9
3,640,412	+		MIT1002_03268	0.16	-1.6
3,640,412	+		MIT1002_03268	0.16	-1.0
3,640,412	+		MIT1002_03268	0.16	-0.2
3,640,412	+		MIT1002_03268	0.16	+0.0
3,640,420	-		MIT1002_03268	0.17	-1.1
3,640,427	+		MIT1002_03268	0.19	+0.7
3,640,430	-		MIT1002_03268	0.19	-0.0
3,640,430	-		MIT1002_03268	0.19	+0.2
3,640,435	-		MIT1002_03268	0.20	+0.3
3,640,462	+		MIT1002_03268	0.25	+0.8
3,640,523	+		MIT1002_03268	0.36	-1.5
3,640,548	-		MIT1002_03268	0.40	+1.8
3,640,561	-		MIT1002_03268	0.43	+0.3
3,640,563	-		MIT1002_03268	0.43	+0.0
3,640,563	-		MIT1002_03268	0.43	+1.3
3,640,609	+		MIT1002_03268	0.51	+0.6
3,640,618	-		MIT1002_03268	0.53	-0.2
3,640,620	+		MIT1002_03268	0.53	-0.0
3,640,620	+		MIT1002_03268	0.53	+0.6
3,640,628	-		MIT1002_03268	0.55	+0.5
3,640,628	-		MIT1002_03268	0.55	-0.4
3,640,646	-		MIT1002_03268	0.58	-0.3
3,640,779	+		MIT1002_03268	0.82	-0.9