Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03131

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,483,585	-		MIT1002_03130	0.14	+0.7
3,483,593	+		MIT1002_03130	0.15	-1.5
3,483,615	-		MIT1002_03130	0.17	+0.1
3,483,616	-		MIT1002_03130	0.17	-0.7
3,483,738	-		MIT1002_03130	0.28	+0.3
3,483,738	-		MIT1002_03130	0.28	-0.2
3,483,738	-		MIT1002_03130	0.28	-1.9
3,483,738	-		MIT1002_03130	0.28	-0.5
3,483,944	+		MIT1002_03130	0.46	-0.9
3,484,001	-		MIT1002_03130	0.51	+0.3
3,484,011	-		MIT1002_03130	0.52	-0.7
3,484,122	+		MIT1002_03130	0.62	-2.5
3,484,122	+		MIT1002_03130	0.62	-2.2
3,484,129	+		MIT1002_03130	0.62	-1.6
3,484,130	-		MIT1002_03130	0.63	+0.1
3,484,160	+		MIT1002_03130	0.65	-2.1
3,484,224	-		MIT1002_03130	0.71	-2.2
3,484,286	+		MIT1002_03130	0.76	-0.4
3,484,286	+		MIT1002_03130	0.76	+0.6
3,484,286	+		MIT1002_03130	0.76	-1.7
3,484,294	-		MIT1002_03130	0.77	+0.6
3,484,398	-		MIT1002_03130	0.86	+0.6
3,484,425	-		MIT1002_03130	0.89	-0.7
3,484,432	-		MIT1002_03130	0.89	-2.3
3,484,443	+				-0.4
3,484,461	-				+0.0
3,484,461	-				+0.3
3,484,475	-				-0.5
3,484,532	-				-0.4
3,487,111	+				+0.8
3,487,123	-				-0.5
3,487,146	-				+1.4
3,487,959	-		MIT1002_03132	0.67	+1.6