Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03107

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,460,131	-		MIT1002_03106	0.40	+0.2
3,460,135	+		MIT1002_03106	0.40	-1.7
3,460,160	+		MIT1002_03106	0.42	+0.6
3,460,168	-		MIT1002_03106	0.43	+1.1
3,460,202	-		MIT1002_03106	0.46	-0.2
3,460,248	+		MIT1002_03106	0.51	-0.0
3,460,264	-		MIT1002_03106	0.52	-0.2
3,460,275	-		MIT1002_03106	0.53	-0.9
3,460,281	-		MIT1002_03106	0.54	+0.5
3,460,420	+		MIT1002_03106	0.67	+1.2
3,460,428	-		MIT1002_03106	0.68	-0.2
3,460,457	-		MIT1002_03106	0.71	+1.0
3,460,493	-		MIT1002_03106	0.74	-0.5
3,460,502	-		MIT1002_03106	0.75	+1.3
3,460,630	+		MIT1002_03106	0.88	+0.6
3,460,713	+				-1.2
3,460,751	+				+0.2
3,460,845	-				-0.4
3,460,845	-				+1.0
3,462,446	+				-0.7
3,462,455	+				-0.7
3,462,579	-				+1.6
3,462,594	+				+1.0
3,462,594	+				+0.0
3,462,661	-		MIT1002_03108	0.16	-0.7
3,462,663	+		MIT1002_03108	0.17	-0.0
3,462,689	+		MIT1002_03108	0.23	+1.3
3,462,689	+		MIT1002_03108	0.23	-0.7
3,462,689	+		MIT1002_03108	0.23	-1.8
3,462,697	-		MIT1002_03108	0.25	+0.3
3,462,756	+		MIT1002_03108	0.39	-0.1
3,462,827	+		MIT1002_03108	0.57	+0.3
3,462,835	+		MIT1002_03108	0.59	-1.7
3,462,842	+		MIT1002_03108	0.60	+0.0
3,462,850	-		MIT1002_03108	0.62	+0.1
3,462,872	-		MIT1002_03108	0.68	-0.2
3,462,967	-				+1.5
3,463,093	-				+0.1
3,463,093	-				+2.3