Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02748

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,050,045	-		MIT1002_02747	0.28	-0.4
3,050,070	-		MIT1002_02747	0.31	-0.1
3,050,071	-		MIT1002_02747	0.31	-0.1
3,050,084	+		MIT1002_02747	0.32	+2.0
3,050,155	+		MIT1002_02747	0.38	-1.3
3,050,168	-		MIT1002_02747	0.39	+6.0
3,050,199	-		MIT1002_02747	0.42	-1.5
3,050,199	-		MIT1002_02747	0.42	-0.2
3,050,254	-		MIT1002_02747	0.47	+0.1
3,050,347	+		MIT1002_02747	0.55	-1.5
3,050,347	+		MIT1002_02747	0.55	-1.5
3,050,377	+		MIT1002_02747	0.58	-0.3
3,050,378	-		MIT1002_02747	0.58	+0.7
3,050,392	+		MIT1002_02747	0.59	+0.8
3,050,392	+		MIT1002_02747	0.59	+0.6
3,050,392	+		MIT1002_02747	0.59	+1.1
3,050,392	+		MIT1002_02747	0.59	-0.9
3,050,400	-		MIT1002_02747	0.60	-0.6
3,050,402	+		MIT1002_02747	0.60	-0.1
3,050,410	-		MIT1002_02747	0.61	+1.7
3,050,410	-		MIT1002_02747	0.61	-0.2
3,050,428	-		MIT1002_02747	0.62	-2.2
3,050,758	+				-1.9
3,050,790	+				-0.4
3,050,805	-				-1.6
3,050,942	-				-0.2
3,051,135	-		MIT1002_02748	0.13	+0.6
3,051,137	+		MIT1002_02748	0.13	+0.3
3,051,181	+		MIT1002_02748	0.19	-0.0
3,051,256	+		MIT1002_02748	0.28	-1.2
3,051,299	+		MIT1002_02748	0.33	-0.2
3,051,417	+		MIT1002_02748	0.47	+0.3
3,051,477	+		MIT1002_02748	0.54	+0.3
3,051,483	-		MIT1002_02748	0.55	+0.3
3,051,485	+		MIT1002_02748	0.55	+0.5
3,051,493	-		MIT1002_02748	0.56	+0.7
3,051,496	+		MIT1002_02748	0.56	-0.5
3,051,542	+		MIT1002_02748	0.62	+0.8
3,051,542	+		MIT1002_02748	0.62	+0.7
3,051,550	-		MIT1002_02748	0.63	-0.9
3,051,623	+		MIT1002_02748	0.72	-1.1
3,051,642	+		MIT1002_02748	0.74	+0.4
3,051,762	+		MIT1002_02748	0.88	-1.5
3,051,762	+		MIT1002_02748	0.88	-0.6
3,051,762	+		MIT1002_02748	0.88	-1.6
3,051,762	+		MIT1002_02748	0.88	+0.2
3,051,774	+		MIT1002_02748	0.90	+1.1
3,051,801	+				-0.4
3,051,801	+				+0.7
3,051,809	-				+0.9
3,051,821	-				+1.0
3,051,821	-				-1.5
3,051,821	-				+1.0
3,051,826	-				-0.3
3,051,826	-				+0.4
3,051,838	+				+0.3
3,051,853	+				-0.9
3,051,928	+				+1.8
3,051,938	+				-0.1
3,052,014	-				+0.2
3,052,054	+				+0.1
3,052,062	-				-0.1
3,052,095	+		MIT1002_02749	0.12	-1.5
3,052,098	-		MIT1002_02749	0.13	+0.6
3,052,103	-		MIT1002_02749	0.13	-0.0
3,052,188	+		MIT1002_02749	0.23	+1.0
3,052,345	-		MIT1002_02749	0.40	+0.3
3,052,345	-		MIT1002_02749	0.40	-0.2
3,052,345	-		MIT1002_02749	0.40	-0.3
3,052,356	-		MIT1002_02749	0.41	+0.2
3,052,357	+		MIT1002_02749	0.41	-0.1
3,052,440	+		MIT1002_02749	0.51	+0.6
3,052,583	-		MIT1002_02749	0.66	-0.4
3,052,583	-		MIT1002_02749	0.66	-0.8
3,052,783	-		MIT1002_02749	0.89	+0.3
3,052,795	+				+0.1
3,052,797	+				+1.4
3,052,804	+				+0.3
3,052,804	+				-0.1
3,052,805	-				+0.9
3,052,811	-				+0.6
3,052,812	-				-0.6
3,052,851	-				-0.0
3,052,851	-				+0.1