Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02737

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
3,037,549	+		MIT1002_02735	0.90	-1.1
3,037,552	-				+0.1
3,037,609	-				-0.4
3,037,672	+				+0.3
3,037,673	-				+0.4
3,037,673	-				-0.1
3,037,700	+				+0.5
3,037,723	-				-1.2
3,037,803	-				+0.9
3,037,845	-				-0.5
3,037,929	-				+0.4
3,037,929	-				+0.2
3,037,981	+				-0.8
3,038,061	-		MIT1002_02736	0.17	-0.3
3,038,122	+		MIT1002_02736	0.28	+3.1
3,038,187	-		MIT1002_02736	0.39	-1.0
3,038,189	-		MIT1002_02736	0.40	+2.0
3,038,206	+		MIT1002_02736	0.43	-1.0
3,038,244	+		MIT1002_02736	0.49	-0.3
3,038,281	-		MIT1002_02736	0.56	+0.9
3,038,290	-		MIT1002_02736	0.57	-0.9
3,038,310	+		MIT1002_02736	0.61	+1.2
3,038,323	-		MIT1002_02736	0.63	+1.1
3,038,333	-		MIT1002_02736	0.65	+0.0
3,038,517	-				-0.5
3,038,791	-		MIT1002_02737	0.31	+0.1
3,038,840	+		MIT1002_02737	0.37	-0.3
3,038,853	+		MIT1002_02737	0.38	-0.0
3,038,870	+		MIT1002_02737	0.40	+0.6
3,038,870	+		MIT1002_02737	0.40	+0.1
3,038,871	-		MIT1002_02737	0.40	+1.0
3,038,878	-		MIT1002_02737	0.41	-0.1
3,038,885	-		MIT1002_02737	0.42	+0.8
3,038,895	+		MIT1002_02737	0.43	-1.0
3,038,895	+		MIT1002_02737	0.43	-0.9
3,038,915	+		MIT1002_02737	0.45	+0.4
3,038,915	+		MIT1002_02737	0.45	+1.8
3,038,918	-		MIT1002_02737	0.46	-0.3
3,038,963	+		MIT1002_02737	0.51	+0.3
3,038,973	-		MIT1002_02737	0.52	-1.1
3,039,010	+		MIT1002_02737	0.56	-1.0
3,039,021	-		MIT1002_02737	0.58	+1.6
3,039,035	+		MIT1002_02737	0.59	+1.8
3,039,035	+		MIT1002_02737	0.59	+0.2
3,039,054	+		MIT1002_02737	0.62	-0.2
3,039,062	-		MIT1002_02737	0.62	+1.5
3,039,159	+		MIT1002_02737	0.74	-0.7
3,039,164	+		MIT1002_02737	0.74	-1.8
3,039,186	+		MIT1002_02737	0.77	-1.1
3,039,252	-		MIT1002_02737	0.85	-0.1
3,039,266	+		MIT1002_02737	0.86	+1.0
3,039,317	+				-0.8
3,039,352	-				-0.2
3,039,359	-				-0.7
3,039,421	-				-1.1
3,039,463	-		MIT1002_02738	0.13	+0.3
3,039,529	+		MIT1002_02738	0.24	-1.3
3,039,547	+		MIT1002_02738	0.27	-0.9
3,039,581	+		MIT1002_02738	0.32	-0.8
3,039,581	+		MIT1002_02738	0.32	-0.8
3,039,589	-		MIT1002_02738	0.33	+0.3
3,039,602	-		MIT1002_02738	0.35	-0.8
3,039,644	+		MIT1002_02738	0.42	+0.7
3,039,644	+		MIT1002_02738	0.42	+0.1
3,039,647	-		MIT1002_02738	0.42	+0.3
3,039,647	-		MIT1002_02738	0.42	+0.2
3,039,647	-		MIT1002_02738	0.42	+1.0
3,039,697	-		MIT1002_02738	0.50	-0.2
3,039,703	+		MIT1002_02738	0.51	+1.2
3,039,710	-		MIT1002_02738	0.52	-0.9
3,039,711	-		MIT1002_02738	0.53	-0.6
3,039,712	+		MIT1002_02738	0.53	-0.8
3,039,712	+		MIT1002_02738	0.53	-1.3
3,039,792	+		MIT1002_02738	0.65	-0.2
3,039,853	+		MIT1002_02738	0.75	+0.5
3,039,861	-		MIT1002_02738	0.76	+0.5
3,039,904	+		MIT1002_02738	0.83	-1.0
3,039,914	+		MIT1002_02738	0.85	-0.8
3,039,914	-		MIT1002_02738	0.85	-0.1
3,039,920	+		MIT1002_02738	0.86	-0.7
3,039,961	+				-0.1
3,039,966	+				-1.2
3,039,969	-				-1.6
3,039,990	-				+0.2
3,040,096	+				-0.5
3,040,098	+				+0.5
3,040,098	+				-1.1
3,040,103	+				+0.8
3,040,104	-				-0.7
3,040,106	-				-0.7
3,040,163	+				-0.6
3,040,163	+				-0.1
3,040,171	-				+0.0
3,040,171	-				+0.2
3,040,225	+				-0.1
3,040,225	+				+2.9
3,040,264	-				-3.3
3,040,265	-				-0.9
3,040,322	-				-1.1
3,040,322	-				+0.3