Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02138

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,398,072	-				-1.4
2,398,157	+		MIT1002_02137	0.20	-1.6
2,398,165	-		MIT1002_02137	0.21	-1.3
2,398,316	-		MIT1002_02137	0.41	+0.2
2,398,322	-		MIT1002_02137	0.42	+0.8
2,398,338	+		MIT1002_02137	0.44	-0.4
2,398,344	-		MIT1002_02137	0.45	+0.8
2,398,477	+		MIT1002_02137	0.63	-1.4
2,398,477	+		MIT1002_02137	0.63	+0.6
2,398,479	+		MIT1002_02137	0.63	-0.8
2,398,485	-		MIT1002_02137	0.64	-2.2
2,398,522	+		MIT1002_02137	0.69	-1.8
2,398,522	+		MIT1002_02137	0.69	+0.2
2,398,522	+		MIT1002_02137	0.69	-0.9
2,398,522	+		MIT1002_02137	0.69	-1.2
2,398,530	-		MIT1002_02137	0.70	+0.1
2,398,591	+		MIT1002_02137	0.79	-1.6
2,398,625	+		MIT1002_02137	0.83	-1.9
2,398,625	+		MIT1002_02137	0.83	-1.0
2,398,633	-		MIT1002_02137	0.84	-1.7
2,398,716	-				+0.0
2,398,734	-				+0.2
2,398,813	+				+1.9
2,398,821	-				+0.2
2,398,989	+				+0.3
2,399,018	-				+0.5
2,399,055	+				+0.3
2,399,150	+		MIT1002_02138	0.17	+1.5
2,399,158	-		MIT1002_02138	0.18	+0.8
2,399,158	-		MIT1002_02138	0.18	-0.4
2,399,330	-		MIT1002_02138	0.36	+1.2
2,399,410	+		MIT1002_02138	0.45	+0.6
2,399,430	+		MIT1002_02138	0.47	+0.8
2,399,433	-		MIT1002_02138	0.48	+1.0
2,399,433	-		MIT1002_02138	0.48	-0.2
2,399,433	-		MIT1002_02138	0.48	+1.1
2,399,443	-		MIT1002_02138	0.49	-1.9
2,399,579	+		MIT1002_02138	0.63	-3.1
2,399,580	+		MIT1002_02138	0.64	+0.7
2,399,587	-		MIT1002_02138	0.64	-0.3
2,399,891	+				+0.9
2,399,928	+				+0.3
2,399,936	-				+0.1
2,399,936	-				+0.6
2,400,151	-				-2.0
2,400,244	+		MIT1002_02139	0.19	+1.4
2,400,375	+		MIT1002_02139	0.32	-1.9
2,400,404	+		MIT1002_02139	0.36	-0.4
2,400,409	+		MIT1002_02139	0.36	-1.2
2,400,422	-		MIT1002_02139	0.37	-0.7
2,400,470	+		MIT1002_02139	0.42	+0.1
2,400,485	+		MIT1002_02139	0.44	-1.7
2,400,485	+		MIT1002_02139	0.44	-0.0
2,400,485	+		MIT1002_02139	0.44	+0.1
2,400,493	-		MIT1002_02139	0.45	-0.3
2,400,493	-		MIT1002_02139	0.45	-1.1
2,400,533	+		MIT1002_02139	0.49	+0.4
2,400,585	-		MIT1002_02139	0.55	-0.3
2,400,592	+		MIT1002_02139	0.55	-0.1
2,400,592	+		MIT1002_02139	0.55	+0.7
2,400,600	-		MIT1002_02139	0.56	-0.1
2,400,632	+		MIT1002_02139	0.59	-1.7
2,400,636	-		MIT1002_02139	0.60	+1.1
2,400,766	+		MIT1002_02139	0.73	+0.4
2,400,768	-		MIT1002_02139	0.74	+0.4
2,400,812	-		MIT1002_02139	0.78	+0.1
2,400,812	-		MIT1002_02139	0.78	-0.4
2,400,903	+		MIT1002_02139	0.88	+0.8