Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02103

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,362,664	-				-2.7
2,362,725	-		MIT1002_02101	0.11	+1.2
2,362,726	-		MIT1002_02101	0.12	-1.8
2,362,726	-		MIT1002_02101	0.12	+0.3
2,362,759	+		MIT1002_02101	0.29	-1.3
2,362,786	+		MIT1002_02101	0.43	-1.0
2,362,786	+		MIT1002_02101	0.43	+1.5
2,362,794	-		MIT1002_02101	0.47	-1.2
2,362,794	-		MIT1002_02101	0.47	-0.4
2,362,794	-		MIT1002_02101	0.47	-1.4
2,362,938	+				+0.5
2,362,938	+				+0.5
2,362,964	+				+1.6
2,363,031	+				+0.8
2,363,039	-				-0.5
2,363,047	-		MIT1002_02102	0.11	+1.0
2,363,057	-		MIT1002_02102	0.12	-0.4
2,363,095	+		MIT1002_02102	0.18	+0.4
2,363,095	+		MIT1002_02102	0.18	+0.0
2,363,103	-		MIT1002_02102	0.19	-0.5
2,363,115	-		MIT1002_02102	0.21	+0.7
2,363,115	-		MIT1002_02102	0.21	+0.3
2,363,310	+		MIT1002_02102	0.52	-0.0
2,363,317	-		MIT1002_02102	0.53	-0.4
2,363,322	-		MIT1002_02102	0.54	-0.1
2,363,347	+		MIT1002_02102	0.58	+0.4
2,363,355	-		MIT1002_02102	0.59	-1.0
2,363,438	+		MIT1002_02102	0.72	-0.6
2,363,455	+		MIT1002_02102	0.75	-1.5
2,363,567	+				-2.7
2,363,590	+				+0.1
2,363,598	-				-0.1
2,363,674	+				+0.3
2,363,698	+		MIT1002_02103	0.15	+1.8
2,363,706	-		MIT1002_02103	0.17	-0.3
2,363,706	-		MIT1002_02103	0.17	-0.9
2,363,782	+		MIT1002_02103	0.43	-0.5
2,363,782	+		MIT1002_02103	0.43	+2.3
2,363,814	-		MIT1002_02103	0.54	-1.0
2,363,836	-		MIT1002_02103	0.62	+1.5
2,363,847	-		MIT1002_02103	0.65	-0.2
2,363,977	+				+0.9
2,364,029	-				-0.5
2,364,058	+		MIT1002_02104	0.13	-0.1
2,364,103	+		MIT1002_02104	0.18	+0.7
2,364,106	-		MIT1002_02104	0.18	-0.8
2,364,106	-		MIT1002_02104	0.18	+0.4
2,364,106	-		MIT1002_02104	0.18	+0.2
2,364,106	-		MIT1002_02104	0.18	+0.4
2,364,122	+		MIT1002_02104	0.20	-0.8
2,364,131	-		MIT1002_02104	0.21	+0.3
2,364,177	-		MIT1002_02104	0.26	-1.7
2,364,198	-		MIT1002_02104	0.29	-3.0
2,364,243	-		MIT1002_02104	0.34	+0.2
2,364,251	+		MIT1002_02104	0.35	-1.2
2,364,281	+		MIT1002_02104	0.38	-0.3
2,364,289	-		MIT1002_02104	0.39	+0.7
2,364,306	+		MIT1002_02104	0.41	-0.6
2,364,306	+		MIT1002_02104	0.41	-0.4
2,364,314	-		MIT1002_02104	0.42	-0.3
2,364,314	-		MIT1002_02104	0.42	+0.4
2,364,321	+		MIT1002_02104	0.43	-1.2
2,364,358	-		MIT1002_02104	0.47	+0.8
2,364,371	+		MIT1002_02104	0.48	+0.5
2,364,371	+		MIT1002_02104	0.48	+1.5
2,364,435	-		MIT1002_02104	0.56	-0.8
2,364,462	-		MIT1002_02104	0.59	+0.5
2,364,479	+		MIT1002_02104	0.61	+0.8
2,364,501	+		MIT1002_02104	0.63	+0.2
2,364,502	+		MIT1002_02104	0.63	-0.8
2,364,577	-		MIT1002_02104	0.72	-0.2
2,364,582	-		MIT1002_02104	0.72	-0.6
2,364,582	-		MIT1002_02104	0.72	+0.1
2,364,582	-		MIT1002_02104	0.72	+0.8
2,364,637	-		MIT1002_02104	0.79	+0.7
2,364,656	-		MIT1002_02104	0.81	-2.0
2,364,665	+		MIT1002_02104	0.82	-0.9
2,364,675	+		MIT1002_02104	0.83	+3.2
2,364,703	+		MIT1002_02104	0.86	-2.1
2,364,754	+				-0.3
2,364,821	+				-1.2
2,364,857	-		MIT1002_02105	0.17	+0.2
2,364,858	-		MIT1002_02105	0.18	-0.5
2,364,862	-		MIT1002_02105	0.19	-1.1
2,364,864	+		MIT1002_02105	0.20	-0.5