Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01889

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,103,314	+				-0.9
2,103,314	+				-1.5
2,103,369	-				-1.4
2,103,398	+				-0.1
2,103,406	-				-1.8
2,103,425	-				-1.2
2,103,474	+				+0.7
2,103,474	+				+0.0
2,103,482	-				+0.0
2,103,528	-				-0.7
2,103,733	-		MIT1002_01889	0.69	+0.4
2,103,790	+		MIT1002_01889	0.88	-1.4
2,104,145	+		MIT1002_01890	0.29	+0.6
2,104,174	-		MIT1002_01890	0.46	-0.4
2,104,178	-		MIT1002_01890	0.48	+0.3
2,104,178	-		MIT1002_01890	0.48	-1.4
2,104,260	+				-0.3
2,104,260	+				-0.3
2,104,548	+				+1.4
2,104,555	+				+0.6
2,104,734	-		MIT1002_01892	0.20	+1.4
2,104,749	-		MIT1002_01892	0.22	+0.2
2,104,794	-		MIT1002_01892	0.28	+0.2