Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01864

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,074,797	-		MIT1002_01862	0.40	+0.7
2,074,820	+		MIT1002_01862	0.43	+0.2
2,074,828	-		MIT1002_01862	0.44	+0.6
2,074,907	-		MIT1002_01862	0.54	-0.5
2,074,907	-		MIT1002_01862	0.54	-0.4
2,074,907	-		MIT1002_01862	0.54	-0.0
2,074,907	-		MIT1002_01862	0.54	+1.6
2,075,058	-		MIT1002_01862	0.73	-0.3
2,075,138	+		MIT1002_01862	0.84	+0.1
2,075,166	+		MIT1002_01862	0.87	-0.3
2,075,206	+				-0.8
2,075,440	+		MIT1002_01863	0.24	+0.2
2,075,536	+		MIT1002_01863	0.57	+1.2
2,075,605	+		MIT1002_01863	0.80	-0.2
2,075,617	+		MIT1002_01863	0.84	-0.1
2,075,625	-		MIT1002_01863	0.87	-0.9
2,075,625	-		MIT1002_01863	0.87	+0.4
2,075,708	+				-0.7
2,075,750	+				+0.8
2,075,793	-				+0.7
2,075,928	+		MIT1002_01864	0.27	+0.2
2,075,936	-		MIT1002_01864	0.28	-0.2
2,075,941	+		MIT1002_01864	0.29	-1.4
2,075,941	-		MIT1002_01864	0.29	-0.6
2,076,082	+		MIT1002_01864	0.51	+0.3
2,076,090	-		MIT1002_01864	0.53	-2.0
2,076,148	-		MIT1002_01864	0.62	+2.0
2,076,176	+		MIT1002_01864	0.66	+0.2
2,076,176	+		MIT1002_01864	0.66	-1.0
2,076,241	+		MIT1002_01864	0.77	-0.9
2,076,260	-		MIT1002_01864	0.80	-0.8
2,076,323	+		MIT1002_01864	0.90	-1.4
2,076,331	-				+0.0
2,076,357	+				+0.7
2,076,357	+				+0.2