Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01659

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
1,831,394	-		MIT1002_01658	0.10	-1.4
1,831,394	-		MIT1002_01658	0.10	-0.2
1,831,403	-		MIT1002_01658	0.12	-1.0
1,831,420	-		MIT1002_01658	0.14	-1.3
1,831,490	+		MIT1002_01658	0.22	-0.6
1,831,490	+		MIT1002_01658	0.22	+1.8
1,831,498	-		MIT1002_01658	0.23	-0.5
1,831,502	+		MIT1002_01658	0.24	-0.7
1,831,703	-		MIT1002_01658	0.48	-1.2
1,831,744	-		MIT1002_01658	0.53	-2.3
1,831,788	+		MIT1002_01658	0.59	+0.5
1,831,833	-		MIT1002_01658	0.64	-0.3
1,831,868	+		MIT1002_01658	0.69	-1.5
1,831,868	+		MIT1002_01658	0.69	+1.5
1,831,876	-		MIT1002_01658	0.69	-0.6
1,831,876	-		MIT1002_01658	0.69	+0.3
1,831,876	-		MIT1002_01658	0.69	+0.0
1,831,876	-		MIT1002_01658	0.69	-0.4
1,831,954	+		MIT1002_01658	0.79	-0.3
1,832,036	-		MIT1002_01658	0.89	+0.4
1,832,107	-				-2.1
1,832,146	+				+0.6
1,832,173	+				+0.7
1,832,174	-				+0.7
1,832,265	-				+0.5
1,832,271	-				+0.9
1,832,297	+				-1.6
1,832,299	-				+0.9
1,832,299	-				-0.0
1,832,299	-				+0.9
1,832,299	-				+0.3
1,832,308	+				-1.3
1,832,316	-				+1.2
1,832,341	+				-0.1
1,832,341	+				-0.1
1,832,372	+				+0.7
1,832,447	+		MIT1002_01659	0.12	-0.1
1,832,479	+		MIT1002_01659	0.14	+0.2
1,832,479	+		MIT1002_01659	0.14	+0.0
1,832,479	+		MIT1002_01659	0.14	-0.3
1,832,487	-		MIT1002_01659	0.15	+0.1
1,832,487	-		MIT1002_01659	0.15	-0.2
1,832,487	-		MIT1002_01659	0.15	-1.7
1,832,487	-		MIT1002_01659	0.15	+0.2
1,832,496	-		MIT1002_01659	0.15	-0.6
1,832,503	+		MIT1002_01659	0.16	+0.2
1,832,503	+		MIT1002_01659	0.16	+0.4
1,832,503	+		MIT1002_01659	0.16	-0.1
1,832,503	+		MIT1002_01659	0.16	+0.1
1,832,503	+		MIT1002_01659	0.16	-0.2
1,832,503	+		MIT1002_01659	0.16	-1.9
1,832,503	+		MIT1002_01659	0.16	-0.4
1,832,503	+		MIT1002_01659	0.16	-1.4
1,832,511	-		MIT1002_01659	0.16	+1.0
1,832,511	-		MIT1002_01659	0.16	-1.1
1,832,511	-		MIT1002_01659	0.16	+0.8
1,832,511	-		MIT1002_01659	0.16	-0.8
1,832,511	-		MIT1002_01659	0.16	+0.1
1,832,511	-		MIT1002_01659	0.16	+1.2
1,832,511	-		MIT1002_01659	0.16	-0.5
1,832,511	-		MIT1002_01659	0.16	-2.6
1,832,511	-		MIT1002_01659	0.16	-0.3
1,832,547	+		MIT1002_01659	0.19	-1.6
1,832,577	+		MIT1002_01659	0.21	-0.5
1,832,585	-		MIT1002_01659	0.22	-0.5
1,832,585	-		MIT1002_01659	0.22	+0.4
1,832,633	+		MIT1002_01659	0.26	+1.5
1,832,689	+		MIT1002_01659	0.30	-1.6
1,832,708	+		MIT1002_01659	0.31	+0.4
1,832,835	+		MIT1002_01659	0.41	-0.7
1,832,837	+		MIT1002_01659	0.41	-0.6
1,832,845	-		MIT1002_01659	0.42	-0.5
1,832,845	-		MIT1002_01659	0.42	-0.7
1,832,855	-		MIT1002_01659	0.42	-1.3
1,832,855	-		MIT1002_01659	0.42	+0.6
1,832,856	+		MIT1002_01659	0.42	+1.3
1,832,928	+		MIT1002_01659	0.48	-0.5
1,832,960	-		MIT1002_01659	0.50	-0.2
1,833,013	-		MIT1002_01659	0.54	-0.4
1,833,158	-		MIT1002_01659	0.65	+0.6
1,833,158	-		MIT1002_01659	0.65	-0.1
1,833,242	-		MIT1002_01659	0.72	-1.3
1,833,303	-		MIT1002_01659	0.76	-1.2
1,833,370	+		MIT1002_01659	0.81	+0.9
1,833,384	-		MIT1002_01659	0.82	-0.2
1,833,384	-		MIT1002_01659	0.82	-0.7
1,833,400	+		MIT1002_01659	0.84	-0.0
1,833,403	-		MIT1002_01659	0.84	+0.3
1,833,420	+		MIT1002_01659	0.85	+1.6
1,833,420	+		MIT1002_01659	0.85	-0.5
1,833,428	-		MIT1002_01659	0.86	+0.3
1,833,428	-		MIT1002_01659	0.86	-1.4
1,833,428	-		MIT1002_01659	0.86	+0.2
1,833,496	+				-2.2
1,833,609	-				-0.1
1,833,609	-				+0.1
1,833,680	+				+0.2
1,833,752	-				+0.2
1,833,759	+				-1.9
1,833,789	+		MIT1002_01660	0.12	+1.3
1,833,823	-		MIT1002_01660	0.17	-0.4
1,833,892	+		MIT1002_01660	0.25	-0.7
1,833,906	+		MIT1002_01660	0.27	+0.3
1,833,942	-		MIT1002_01660	0.31	-1.2
1,833,972	+		MIT1002_01660	0.35	+0.9
1,833,972	+		MIT1002_01660	0.35	+2.2
1,833,980	-		MIT1002_01660	0.36	-0.5
1,833,980	-		MIT1002_01660	0.36	-1.0
1,833,980	-		MIT1002_01660	0.36	-0.7
1,834,007	+		MIT1002_01660	0.39	+1.6
1,834,115	+		MIT1002_01660	0.53	-0.2
1,834,118	-		MIT1002_01660	0.53	-0.4
1,834,213	-		MIT1002_01660	0.65	+0.2
1,834,278	-		MIT1002_01660	0.73	-0.0
1,834,302	+		MIT1002_01660	0.76	+1.2
1,834,310	-		MIT1002_01660	0.77	-0.2
1,834,337	+		MIT1002_01660	0.80	-0.4
1,834,422	-				-0.5
1,834,427	+				+0.4
1,834,436	+				-0.2
1,834,436	+				-0.4
1,834,444	-				-1.0
1,834,454	+				-0.2
1,834,462	-				-0.2
1,834,464	+				-0.4
1,834,469	+				+1.8
1,834,469	+				+1.4
1,834,477	-				-0.2
1,834,477	-				+0.1
1,834,501	+				+0.4
1,834,568	+				-0.3
1,834,609	-				+0.3