Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01570

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
1,726,808	-		MIT1002_01569	0.33	-0.7
1,726,822	+		MIT1002_01569	0.34	-1.6
1,726,830	-		MIT1002_01569	0.34	-1.4
1,726,923	+		MIT1002_01569	0.42	-0.8
1,726,936	-		MIT1002_01569	0.43	+0.8
1,726,987	-		MIT1002_01569	0.47	+0.7
1,727,025	+		MIT1002_01569	0.50	+3.0
1,727,070	+		MIT1002_01569	0.53	+0.4
1,727,073	-		MIT1002_01569	0.54	-0.3
1,727,125	+		MIT1002_01569	0.58	-0.7
1,727,265	-		MIT1002_01569	0.69	+0.6
1,727,413	+		MIT1002_01569	0.81	-1.0
1,727,418	+		MIT1002_01569	0.81	+0.6
1,727,426	-		MIT1002_01569	0.82	+0.2
1,727,481	-		MIT1002_01569	0.86	+1.9
1,727,504	-		MIT1002_01569	0.88	+0.1
1,727,525	-		MIT1002_01569	0.90	-0.1
1,727,547	+				+0.3
1,727,641	+				+0.3
1,727,732	+				-0.8
1,727,825	-				-0.0
1,727,928	-		MIT1002_01570	0.17	-1.2
1,727,928	-		MIT1002_01570	0.17	-0.4
1,727,931	+		MIT1002_01570	0.18	-0.1
1,728,070	+		MIT1002_01570	0.28	-0.1
1,728,180	+		MIT1002_01570	0.37	+0.8
1,728,192	+		MIT1002_01570	0.38	-2.2
1,728,193	-		MIT1002_01570	0.38	-0.3
1,728,201	-		MIT1002_01570	0.38	-0.4
1,728,289	-		MIT1002_01570	0.45	-1.1
1,728,341	+		MIT1002_01570	0.49	+0.1
1,728,396	+		MIT1002_01570	0.54	+0.5
1,728,416	-		MIT1002_01570	0.55	-2.0
1,728,464	+		MIT1002_01570	0.59	+2.3
1,728,464	+		MIT1002_01570	0.59	-1.0
1,728,491	+		MIT1002_01570	0.61	-1.6
1,728,501	+		MIT1002_01570	0.62	-0.7
1,728,574	-		MIT1002_01570	0.67	-0.5
1,728,668	+		MIT1002_01570	0.75	+1.4
1,728,668	+		MIT1002_01570	0.75	-1.2
1,728,702	-		MIT1002_01570	0.77	-1.6
1,728,730	+		MIT1002_01570	0.79	-0.5
1,728,792	+		MIT1002_01570	0.84	-1.6
1,728,800	-		MIT1002_01570	0.85	-0.1
1,728,845	+		MIT1002_01570	0.88	+0.2
1,728,845	+		MIT1002_01570	0.88	+1.0
1,728,956	-				+1.8
1,729,076	-		MIT1002_01571	0.23	-2.1
1,729,132	+		MIT1002_01571	0.40	+0.5
1,729,140	-		MIT1002_01571	0.42	-1.3
1,729,159	+		MIT1002_01571	0.48	+1.2
1,729,159	+		MIT1002_01571	0.48	+0.5
1,729,159	+		MIT1002_01571	0.48	+0.3
1,729,159	+		MIT1002_01571	0.48	-0.3
1,729,159	+		MIT1002_01571	0.48	+0.2
1,729,165	-		MIT1002_01571	0.50	-1.4
1,729,167	-		MIT1002_01571	0.50	-1.4
1,729,167	-		MIT1002_01571	0.50	+1.0
1,729,237	+		MIT1002_01571	0.72	+0.4
1,729,245	+		MIT1002_01571	0.74	-0.6
1,729,261	-		MIT1002_01571	0.79	-1.6
1,729,265	+		MIT1002_01571	0.80	-0.3
1,729,265	+		MIT1002_01571	0.80	+0.5
1,729,265	+		MIT1002_01571	0.80	-1.2
1,729,273	-		MIT1002_01571	0.83	-0.5
1,729,273	-		MIT1002_01571	0.83	-1.0
1,729,280	-		MIT1002_01571	0.85	+0.1
1,729,393	-				+0.0
1,729,393	-				-3.6
1,729,398	-				+0.5
1,729,466	+		MIT1002_01572	0.16	+0.2
1,729,613	+		MIT1002_01572	0.45	+0.4
1,729,747	-		MIT1002_01572	0.71	+1.0
1,729,786	-		MIT1002_01572	0.79	-0.5
1,729,836	-		MIT1002_01572	0.89	+0.4
1,729,945	-				-0.2