Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01547

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
1,699,985	-		MIT1002_01546	0.18	-1.7
1,699,995	-		MIT1002_01546	0.21	+0.4
1,700,023	+		MIT1002_01546	0.29	-3.7
1,700,033	+		MIT1002_01546	0.32	-2.1
1,700,036	-		MIT1002_01546	0.32	-0.5
1,700,086	+		MIT1002_01546	0.47	-2.6
1,700,131	-		MIT1002_01546	0.60	-0.9
1,700,258	+				-0.0
1,700,274	+				-2.8
1,700,297	-				+1.0
1,700,317	+				-0.3
1,700,317	+				-4.0
1,700,317	+				-3.3
1,700,317	+				-3.0
1,700,317	+				-2.8
1,700,317	+				-2.5
1,700,317	+				-2.3
1,700,317	+				-2.8
1,700,317	+				-2.5
1,700,317	+				-0.8
1,700,317	+				-3.0
1,700,317	+				-2.6
1,700,317	+				-2.1
1,700,317	+				-1.3
1,700,317	+				-2.1
1,700,317	+				-2.3
1,700,317	+				-3.7
1,700,317	+				-1.0
1,700,317	+				-1.8
1,700,325	-				-0.1
1,700,325	-				+0.3
1,700,325	-				+2.9
1,700,325	-				+0.2
1,700,325	-				+2.0
1,700,325	-				+1.0
1,700,325	-				+0.7
1,700,325	-				-0.3
1,700,325	-				-0.3
1,700,325	-				-0.2
1,700,325	-				-0.7
1,700,325	-				-0.6
1,700,325	-				+0.2
1,700,325	-				+0.3
1,700,526	+				-0.0
1,700,533	+				-0.5
1,700,548	+				+1.9
1,700,653	+		MIT1002_01547	0.25	-1.3
1,700,653	+		MIT1002_01547	0.25	-0.5
1,700,653	+		MIT1002_01547	0.25	-1.2
1,700,661	-		MIT1002_01547	0.27	+0.8
1,700,661	-		MIT1002_01547	0.27	-0.7
1,700,661	-		MIT1002_01547	0.27	-0.0
1,700,661	-		MIT1002_01547	0.27	+0.4
1,700,661	-		MIT1002_01547	0.27	-1.1
1,700,790	+		MIT1002_01547	0.52	+0.4
1,700,811	+		MIT1002_01547	0.56	-0.5
1,700,819	-		MIT1002_01547	0.58	-0.4
1,700,865	+		MIT1002_01547	0.67	+0.3
1,700,947	-		MIT1002_01547	0.84	-2.0
1,701,050	+				+0.6
1,701,082	-		MIT1002_01548	0.13	+0.9
1,701,121	+		MIT1002_01548	0.23	+1.0
1,701,129	+		MIT1002_01548	0.25	+0.1
1,701,162	+		MIT1002_01548	0.33	+0.5
1,701,204	-		MIT1002_01548	0.44	-0.2
1,701,214	+		MIT1002_01548	0.46	-0.8
1,701,214	+		MIT1002_01548	0.46	-0.0
1,701,214	+		MIT1002_01548	0.46	+1.4
1,701,214	+		MIT1002_01548	0.46	+0.5
1,701,214	+		MIT1002_01548	0.46	+1.8
1,701,222	-		MIT1002_01548	0.48	+0.9
1,701,222	-		MIT1002_01548	0.48	+0.4
1,701,222	-		MIT1002_01548	0.48	+0.2
1,701,232	-		MIT1002_01548	0.51	-0.7
1,701,232	-		MIT1002_01548	0.51	+0.4
1,701,284	+		MIT1002_01548	0.64	+0.2
1,701,286	+		MIT1002_01548	0.65	-0.6
1,701,333	+		MIT1002_01548	0.77	+0.3
1,701,341	-		MIT1002_01548	0.79	-0.7
1,701,341	-		MIT1002_01548	0.79	-0.7
1,701,341	-		MIT1002_01548	0.79	+2.3
1,701,346	-		MIT1002_01548	0.80	+0.6
1,701,383	-		MIT1002_01548	0.90	-0.1
1,701,399	+				+2.5
1,701,407	+				+0.9
1,701,498	+				+0.6
1,701,637	-				+0.2
1,701,757	-				-0.2
1,701,783	+				+0.6
1,701,791	-				+1.8
1,701,791	-				+0.3
1,701,791	-				-1.8
1,701,800	-				-0.6
1,701,800	-				-1.5
1,701,862	+				-0.2
1,701,862	+				-0.1
1,701,867	+				-0.2
1,701,966	+				+0.4