Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01353

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
1,496,458	+		MIT1002_01352	0.58	-1.8
1,496,486	-		MIT1002_01352	0.61	-4.9
1,496,522	-		MIT1002_01352	0.64	-0.8
1,496,626	+		MIT1002_01352	0.73	-2.5
1,496,719	+		MIT1002_01352	0.82	-2.4
1,496,799	-		MIT1002_01352	0.89	-3.4
1,496,824	+				-0.6
1,496,832	-				-3.6
1,496,873	-				-2.7
1,496,873	-				-2.8
1,496,957	+				-2.1
1,496,957	+				-2.6
1,496,965	-				-2.8
1,497,038	+				-1.1
1,497,070	+				-2.0
1,497,111	+				-2.8
1,497,119	-				-1.4
1,497,119	-				-1.4
1,497,119	-				+0.5
1,497,136	-				-0.1
1,497,160	+				+1.6
1,497,231	+				-1.3
1,497,236	+				+0.7
1,497,238	+				-0.7
1,497,246	-				+0.4
1,497,269	-				-0.2
1,497,290	-				+0.3
1,497,320	-				+0.0
1,497,408	+				+1.3
1,497,421	-				+0.3
1,497,539	-		MIT1002_01353	0.23	+0.4
1,497,569	-		MIT1002_01353	0.28	+1.5
1,497,584	-		MIT1002_01353	0.31	-0.6
1,497,586	+		MIT1002_01353	0.31	-0.4
1,497,590	+		MIT1002_01353	0.32	+0.7
1,497,614	+		MIT1002_01353	0.36	-1.2
1,497,637	+		MIT1002_01353	0.40	-2.3
1,497,671	-		MIT1002_01353	0.46	+0.3
1,497,671	-		MIT1002_01353	0.46	-2.8
1,497,678	-		MIT1002_01353	0.48	+0.4
1,497,705	+		MIT1002_01353	0.52	-1.7
1,497,714	-		MIT1002_01353	0.54	-0.2
1,497,725	+		MIT1002_01353	0.56	+0.2
1,497,827	+		MIT1002_01353	0.74	+0.0
1,497,841	+		MIT1002_01353	0.76	-0.2
1,497,859	-		MIT1002_01353	0.80	+0.0
1,497,962	-				-0.4
1,498,051	-				-0.3
1,498,193	+				+1.1
1,498,196	-				-0.3
1,498,196	-				-0.1
1,498,288	+		MIT1002_01354	0.11	-0.5
1,498,296	-		MIT1002_01354	0.12	-0.6
1,498,300	+		MIT1002_01354	0.12	-0.2
1,498,463	+		MIT1002_01354	0.22	-0.9
1,498,471	-		MIT1002_01354	0.22	+0.6
1,498,547	+		MIT1002_01354	0.27	+0.1
1,498,560	-		MIT1002_01354	0.28	+0.1
1,498,631	-		MIT1002_01354	0.32	-0.6
1,498,743	+		MIT1002_01354	0.39	-0.5
1,498,822	+		MIT1002_01354	0.44	-0.6
1,498,856	+		MIT1002_01354	0.47	+3.1
1,498,882	+		MIT1002_01354	0.48	+0.1
1,498,894	+		MIT1002_01354	0.49	-0.8
1,498,966	-		MIT1002_01354	0.53	-0.6
1,498,968	+		MIT1002_01354	0.54	+0.1