Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01269

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
1,397,465	-				+0.2
1,397,483	-				+0.8
1,397,510	+				-0.2
1,397,551	+		MIT1002_01268	0.14	-1.1
1,397,551	+		MIT1002_01268	0.14	-0.4
1,397,565	-		MIT1002_01268	0.16	+0.0
1,397,596	+		MIT1002_01268	0.20	-1.4
1,397,604	-		MIT1002_01268	0.21	-0.0
1,397,643	-		MIT1002_01268	0.26	-0.3
1,397,711	+		MIT1002_01268	0.34	+0.6
1,397,711	+		MIT1002_01268	0.34	+2.1
1,397,711	+		MIT1002_01268	0.34	+1.6
1,397,711	+		MIT1002_01268	0.34	+1.1
1,397,718	+		MIT1002_01268	0.35	+0.2
1,397,726	-		MIT1002_01268	0.36	+0.0
1,397,759	+		MIT1002_01268	0.41	-0.1
1,397,760	+		MIT1002_01268	0.41	+0.5
1,397,768	-		MIT1002_01268	0.42	-0.2
1,397,778	-		MIT1002_01268	0.43	+0.4
1,397,801	+		MIT1002_01268	0.46	+0.5
1,397,840	+		MIT1002_01268	0.51	+0.6
1,397,898	+		MIT1002_01268	0.58	-0.7
1,397,953	-		MIT1002_01268	0.65	-1.7
1,397,972	+		MIT1002_01268	0.68	-1.0
1,397,998	-		MIT1002_01268	0.71	+0.5
1,398,025	+		MIT1002_01268	0.75	+1.3
1,398,033	-		MIT1002_01268	0.76	+0.2
1,398,044	-		MIT1002_01268	0.77	-2.1
1,398,185	+				-0.5
1,398,186	+				+0.4
1,398,186	+				-0.3
1,398,193	-				-0.8
1,398,194	-				+0.9
1,398,217	+				-0.6
1,398,318	+				-0.8
1,398,326	-				-1.5
1,398,326	-				-2.1
1,398,326	-				+0.8
1,398,326	-				-0.2
1,398,397	+				+1.3
1,398,397	+				+0.9
1,398,399	+				+1.0
1,398,450	+				-3.0
1,398,507	+				-2.5
1,398,564	-		MIT1002_01269	0.16	+0.6
1,398,570	+		MIT1002_01269	0.17	+1.1
1,398,587	-		MIT1002_01269	0.19	+0.6
1,398,597	-		MIT1002_01269	0.21	-0.8
1,398,597	-		MIT1002_01269	0.21	+0.9
1,398,702	+		MIT1002_01269	0.35	+1.7
1,398,718	-		MIT1002_01269	0.38	+0.3
1,398,739	+		MIT1002_01269	0.41	+0.1
1,398,739	+		MIT1002_01269	0.41	-0.5
1,398,739	+		MIT1002_01269	0.41	+0.7
1,398,747	-		MIT1002_01269	0.42	+0.5
1,398,747	-		MIT1002_01269	0.42	-0.5
1,398,749	-		MIT1002_01269	0.42	-2.5
1,398,788	+		MIT1002_01269	0.48	+0.0
1,398,813	-		MIT1002_01269	0.51	-1.0
1,398,824	+		MIT1002_01269	0.53	+0.6
1,398,835	-		MIT1002_01269	0.54	+0.1
1,398,888	+		MIT1002_01269	0.62	-0.1
1,399,086	+				+0.6
1,399,094	-				+0.6
1,399,137	-				-1.6
1,399,149	-				-0.1
1,399,190	+				+0.8
1,399,203	+				-0.7
1,399,204	-				+1.7
1,399,210	-				-2.5
1,399,272	+				-2.2
1,399,272	+				+0.0
1,399,297	-				-0.8
1,399,335	-				-1.5
1,399,350	-				-0.7
1,399,372	-				+1.3
1,399,424	+				-1.5
1,399,432	-				+0.9