Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01255
Experiment: monoculture; Experiment B, time point 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | monoculture; Experiment B, time point 3 |
|---|---|---|---|---|---|
| remove | |||||
| 1,381,023 | - | -0.4 | |||
| 1,381,056 | - | +0.4 | |||
| 1,381,313 | - | MIT1002_01255 | 0.16 | +1.7 | |
| 1,381,313 | - | MIT1002_01255 | 0.16 | +0.4 | |
| 1,381,478 | - | MIT1002_01255 | 0.21 | +0.1 | |
| 1,381,668 | - | MIT1002_01255 | 0.28 | -1.4 | |
| 1,381,854 | - | MIT1002_01255 | 0.34 | -0.3 | |
| 1,382,042 | - | MIT1002_01255 | 0.41 | +1.6 | |
| 1,383,796 | - | +0.0 |
Or see this region's nucleotide sequence