Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15625

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,422,818	+				+1.0
3,422,818	+				-1.1
3,422,818	+				-1.9
3,422,818	+				-2.1
3,422,818	+				+0.7
3,422,818	+				-1.6
3,422,818	+				+0.6
3,422,818	+				+0.4
3,422,818	+				+1.6
3,422,818	+				-2.1
3,422,818	+				-2.2
3,422,818	+				-0.6
3,422,818	+				-1.8
3,422,818	+				-0.9
3,422,818	+				-2.2
3,422,818	+				-1.3
3,422,818	+				-1.0
3,422,818	+				-2.8
3,422,818	+				-1.7
3,422,818	+				+0.0
3,422,818	+				-2.4
3,422,818	+				-1.0
3,422,818	+				-0.9
3,422,818	+				-0.8
3,422,818	+				-0.5
3,422,818	+				-1.5
3,422,818	+				-1.8
3,422,818	+				-1.7
3,422,818	+				-2.8
3,422,818	+				+0.9
3,422,819	-				-1.1
3,422,819	-				-0.8
3,422,819	-				-1.6
3,422,819	-				-1.1
3,422,819	-				-0.7
3,422,819	-				-0.2
3,422,819	-				-1.9
3,422,819	-				-1.1
3,422,819	-				-0.6
3,422,819	-				+1.0
3,422,819	-				+0.9
3,422,819	-				-2.0
3,422,819	-				+0.1
3,422,819	-				-0.8
3,422,819	-				-0.2
3,422,819	-				-0.3
3,422,819	-				+2.2
3,422,819	-				+0.4
3,422,819	-				-1.4
3,422,819	-				-2.0
3,422,819	-				+0.2
3,422,819	-				-0.6
3,422,858	+				-1.8
3,422,858	+				+0.0
3,422,858	+				-1.7
3,422,858	+				-0.9
3,422,858	+				-1.1
3,422,858	+				-1.0
3,422,858	+				-0.1
3,422,858	+				-0.0
3,422,858	+				-0.6
3,422,858	+				-1.9
3,422,858	+				-1.4
3,422,858	+				-0.4
3,422,859	-				-0.1
3,422,859	-				-0.7
3,422,859	-				-1.6
3,422,859	-				+0.1
3,422,859	-				-1.0
3,422,859	-				-2.5
3,422,947	+				-1.1
3,422,947	+				+1.3
3,422,948	-				-0.6
3,422,948	-				-1.1
3,422,948	-				+0.2
3,422,977	+				-0.3
3,422,977	+				-0.1
3,422,977	+				-1.6
3,422,977	+				-0.9
3,422,977	+				-2.0
3,422,977	+				-0.1
3,422,977	+				-1.7
3,422,978	-				+0.0
3,422,978	-				-0.4
3,422,978	-				-0.3
3,422,978	-				-0.1
3,422,978	-				-0.5
3,423,011	+				-2.6
3,423,079	+		LRK53_RS15620	0.20	-1.2
3,423,079	+		LRK53_RS15620	0.20	+1.0
3,423,079	+		LRK53_RS15620	0.20	-0.5
3,423,079	+		LRK53_RS15620	0.20	+0.6
3,423,079	+		LRK53_RS15620	0.20	-0.0
3,423,079	+		LRK53_RS15620	0.20	-0.7
3,423,080	-		LRK53_RS15620	0.20	+1.6
3,423,080	-		LRK53_RS15620	0.20	-0.5
3,423,080	-		LRK53_RS15620	0.20	-0.2
3,423,080	-		LRK53_RS15620	0.20	-0.3
3,423,091	+		LRK53_RS15620	0.22	-2.0
3,423,091	+		LRK53_RS15620	0.22	+0.0
3,423,092	-		LRK53_RS15620	0.22	-1.4
3,423,092	-		LRK53_RS15620	0.22	-2.1
3,423,284	-		LRK53_RS15620	0.53	-0.6
3,423,284	-		LRK53_RS15620	0.53	+0.0
3,423,284	-		LRK53_RS15620	0.53	-1.7
3,423,284	-		LRK53_RS15620	0.53	+0.7
3,423,322	+		LRK53_RS15620	0.59	-0.5
3,423,322	+		LRK53_RS15620	0.59	-1.6
3,423,322	+		LRK53_RS15620	0.59	-1.1
3,423,322	+		LRK53_RS15620	0.59	-1.0
3,423,322	+		LRK53_RS15620	0.59	+0.8
3,423,322	+		LRK53_RS15620	0.59	-0.5
3,423,322	+		LRK53_RS15620	0.59	-1.3
3,423,322	+		LRK53_RS15620	0.59	-0.9
3,423,322	+		LRK53_RS15620	0.59	-0.6
3,423,322	+		LRK53_RS15620	0.59	-0.7
3,423,322	+		LRK53_RS15620	0.59	+0.9
3,423,323	-		LRK53_RS15620	0.59	-1.1
3,423,323	-		LRK53_RS15620	0.59	-3.0
3,423,323	-		LRK53_RS15620	0.59	-2.8
3,423,323	-		LRK53_RS15620	0.59	-0.6
3,423,323	-		LRK53_RS15620	0.59	-0.5
3,423,323	-		LRK53_RS15620	0.59	+1.7
3,423,323	-		LRK53_RS15620	0.59	+0.7
3,423,323	-		LRK53_RS15620	0.59	-1.3
3,423,323	-		LRK53_RS15620	0.59	-0.5
3,423,323	-		LRK53_RS15620	0.59	-1.3
3,423,323	-		LRK53_RS15620	0.59	-2.8
3,423,538	+				-0.1
3,423,538	+				+1.5
3,423,538	+				-1.3
3,423,538	+				+0.2
3,423,538	+				-1.4
3,423,538	+				-2.5
3,423,539	-				-2.3
3,423,612	+				-2.4
3,423,612	+				-1.2
3,423,612	+				-0.7
3,423,612	+				+0.1
3,423,612	+				-3.7
3,423,612	+				-1.1
3,423,612	+				-0.7
3,423,612	+				-0.3
3,423,612	+				+0.8
3,423,612	+				-0.5
3,423,612	+				+1.1
3,423,612	+				-2.4
3,423,612	+				+0.1
3,423,612	+				-2.3
3,423,612	+				-1.6
3,423,612	+				-1.7
3,423,612	+				-2.0
3,423,612	+				-1.7
3,423,612	+				-1.6
3,423,612	+				-2.8
3,423,612	+				+0.0
3,423,612	+				-0.7
3,423,612	+				+0.3
3,423,612	+				-3.5
3,423,612	+				-0.4
3,423,612	+				+0.1
3,423,613	-				+0.1
3,423,613	-				-0.6
3,423,613	-				-1.1
3,423,613	-				-0.3
3,423,613	-				-1.8
3,423,613	-				-1.6
3,423,613	-				-2.5
3,423,613	-				-0.7
3,423,613	-				-1.6
3,423,613	-				-1.6
3,423,613	-				-2.5
3,423,613	-				-0.4
3,423,613	-				-2.0
3,423,613	-				+1.4
3,423,613	-				-1.8
3,423,613	-				-0.4
3,423,613	-				-2.6
3,423,613	-				-1.2
3,423,613	-				-1.4
3,423,613	-				-1.1
3,423,613	-				+0.2
3,423,613	-				-2.9
3,423,613	-				-1.6
3,423,613	-				-0.9
3,423,613	-				-0.6
3,423,613	-				-0.1
3,423,613	-				+0.0
3,423,615	+				-0.8
3,423,615	+				-1.1
3,423,615	+				+0.0
3,423,615	+				-2.1
3,423,615	+				-1.9
3,423,615	+				+0.1
3,423,615	+				-0.9
3,423,615	+				-2.4
3,423,615	+				+0.4
3,423,615	+				+0.1
3,423,615	+				+0.2
3,423,615	+				-2.0
3,423,615	+				-0.7
3,423,615	+				-0.8
3,423,615	+				-2.4
3,423,615	+				-1.9
3,423,615	+				-0.6
3,423,615	+				-0.4
3,423,615	+				+0.4
3,423,615	+				-2.8
3,423,615	+				-1.0
3,423,615	+				-0.4
3,423,615	+				+0.0
3,423,615	+				-2.1
3,423,616	-				+1.9
3,423,616	-				-1.0
3,423,616	-				-2.3
3,423,616	-				-0.1
3,423,616	-				-0.4
3,423,616	-				-2.9
3,423,616	-				+1.9
3,423,616	-				-1.1
3,423,616	-				-1.7
3,423,616	-				-1.0
3,423,616	-				-1.4
3,423,616	-				+0.8
3,423,616	-				-0.3
3,423,616	-				+0.7
3,423,616	-				-0.3
3,423,616	-				+0.1
3,423,616	-				+0.5
3,423,616	-				-1.0
3,423,616	-				-1.5
3,423,616	-				-0.0
3,423,618	+				-0.9
3,423,618	+				-0.8
3,423,618	+				-0.3
3,423,618	+				-0.6
3,423,618	+				-0.8
3,423,618	+				+0.2
3,423,618	+				-0.8
3,423,618	+				-1.2
3,423,618	+				-2.4
3,423,618	+				-0.0
3,423,618	+				-0.0
3,423,618	+				-0.6
3,423,618	+				-1.5
3,423,618	+				+0.0
3,423,618	+				-1.6
3,423,618	+				-1.6
3,423,618	+				-2.4
3,423,618	+				+0.0
3,423,618	+				-2.3
3,423,619	-				+0.3
3,423,619	-				+1.0
3,423,619	-				-1.7
3,423,678	+				+0.6
3,423,678	+				-2.0
3,423,678	+				+0.0
3,423,678	+				-1.0
3,423,678	+				-1.8
3,423,678	+				-0.5
3,423,678	+				-2.4
3,423,678	+				-1.7
3,423,678	+				+0.2
3,423,678	+				-1.2
3,423,678	+				-1.1
3,423,678	+				-1.7
3,423,678	+				-2.2
3,423,678	+				-2.2
3,423,678	+				-2.6
3,423,678	+				-0.9
3,423,678	+				-1.9
3,423,678	+				-2.2
3,423,678	+				-1.3
3,423,678	+				-2.6
3,423,678	+				-1.3
3,423,678	+				-0.0
3,423,679	-				-0.4
3,423,679	-				-0.5
3,423,679	-				-0.8
3,423,679	-				-1.0
3,423,679	-				-2.0
3,423,679	-				-0.4
3,423,679	-				+0.9
3,423,679	-				-0.6
3,423,679	-				-1.1
3,423,679	-				-0.8
3,423,679	-				+0.6
3,424,010	+		LRK53_RS15625	0.22	-1.4
3,424,011	-		LRK53_RS15625	0.22	-0.4
3,424,055	+		LRK53_RS15625	0.26	+0.7
3,424,055	+		LRK53_RS15625	0.26	+1.0
3,424,055	+		LRK53_RS15625	0.26	-2.0
3,424,055	+		LRK53_RS15625	0.26	-0.4
3,424,055	+		LRK53_RS15625	0.26	-0.8
3,424,055	+		LRK53_RS15625	0.26	-1.5
3,424,055	+		LRK53_RS15625	0.26	-1.2
3,424,055	+		LRK53_RS15625	0.26	-1.0
3,424,055	+		LRK53_RS15625	0.26	+0.2
3,424,055	+		LRK53_RS15625	0.26	+0.5
3,424,055	+		LRK53_RS15625	0.26	-0.3
3,424,055	+		LRK53_RS15625	0.26	-0.8
3,424,055	+		LRK53_RS15625	0.26	-0.7
3,424,056	-		LRK53_RS15625	0.26	-1.0
3,424,056	-		LRK53_RS15625	0.26	-0.1
3,424,056	-		LRK53_RS15625	0.26	+0.5
3,424,056	-		LRK53_RS15625	0.26	-0.4
3,424,056	-		LRK53_RS15625	0.26	-1.7
3,424,127	+		LRK53_RS15625	0.31	+0.6
3,424,127	+		LRK53_RS15625	0.31	-0.7
3,424,448	+		LRK53_RS15625	0.55	+0.7
3,424,449	-		LRK53_RS15625	0.55	-1.2
3,424,449	-		LRK53_RS15625	0.55	-0.9
3,424,449	-		LRK53_RS15625	0.55	+1.0
3,424,466	+		LRK53_RS15625	0.57	-1.8
3,424,466	+		LRK53_RS15625	0.57	-0.5
3,424,467	-		LRK53_RS15625	0.57	-2.5
3,424,467	-		LRK53_RS15625	0.57	+0.7
3,424,483	+		LRK53_RS15625	0.58	-2.4
3,424,483	+		LRK53_RS15625	0.58	-0.8
3,424,483	+		LRK53_RS15625	0.58	-0.5
3,424,483	+		LRK53_RS15625	0.58	-1.8
3,424,483	+		LRK53_RS15625	0.58	+1.0
3,424,483	+		LRK53_RS15625	0.58	-0.6
3,424,483	+		LRK53_RS15625	0.58	-0.3
3,424,483	+		LRK53_RS15625	0.58	-0.7
3,424,483	+		LRK53_RS15625	0.58	-0.1
3,424,483	+		LRK53_RS15625	0.58	-1.1
3,424,483	+		LRK53_RS15625	0.58	+0.2
3,424,483	+		LRK53_RS15625	0.58	-0.7
3,424,483	+		LRK53_RS15625	0.58	-1.3
3,424,484	-		LRK53_RS15625	0.58	-0.3
3,424,484	-		LRK53_RS15625	0.58	-0.5
3,424,484	-		LRK53_RS15625	0.58	-0.3
3,424,484	-		LRK53_RS15625	0.58	+1.0
3,424,484	-		LRK53_RS15625	0.58	+0.0
3,424,484	-		LRK53_RS15625	0.58	-1.0
3,424,484	-		LRK53_RS15625	0.58	+1.5
3,424,484	-		LRK53_RS15625	0.58	-2.1
3,424,484	-		LRK53_RS15625	0.58	-2.0
3,424,484	-		LRK53_RS15625	0.58	-2.1
3,424,484	-		LRK53_RS15625	0.58	-0.3
3,424,484	-		LRK53_RS15625	0.58	-0.1
3,424,488	+		LRK53_RS15625	0.58	-0.1
3,424,488	+		LRK53_RS15625	0.58	-0.5
3,424,488	+		LRK53_RS15625	0.58	-0.9
3,424,488	+		LRK53_RS15625	0.58	-0.3
3,424,489	-		LRK53_RS15625	0.58	+0.0
3,424,489	-		LRK53_RS15625	0.58	-0.7
3,424,658	+		LRK53_RS15625	0.71	-1.4
3,424,865	+		LRK53_RS15625	0.87	-0.1
3,424,866	-		LRK53_RS15625	0.87	-0.9
3,424,866	-		LRK53_RS15625	0.87	-0.5
3,425,182	+				-0.8
3,425,182	+				-1.0
3,425,183	-				+0.0
3,425,183	-				+0.6
3,425,362	+		LRK53_RS15630	0.24	-1.3
3,425,362	+		LRK53_RS15630	0.24	-1.0
3,425,363	-		LRK53_RS15630	0.24	-0.6
3,425,363	-		LRK53_RS15630	0.24	+0.0
3,425,363	-		LRK53_RS15630	0.24	+0.0
3,425,455	+		LRK53_RS15630	0.36	-1.5
3,425,455	+		LRK53_RS15630	0.36	-1.1
3,425,455	+		LRK53_RS15630	0.36	+0.8
3,425,455	+		LRK53_RS15630	0.36	+1.2
3,425,455	+		LRK53_RS15630	0.36	-0.1
3,425,455	+		LRK53_RS15630	0.36	+0.0
3,425,455	+		LRK53_RS15630	0.36	-0.4
3,425,455	+		LRK53_RS15630	0.36	-2.7
3,425,456	-		LRK53_RS15630	0.36	-0.3
3,425,456	-		LRK53_RS15630	0.36	-0.9
3,425,456	-		LRK53_RS15630	0.36	-0.6
3,425,456	-		LRK53_RS15630	0.36	-1.1
3,425,456	-		LRK53_RS15630	0.36	-0.3
3,425,456	-		LRK53_RS15630	0.36	+1.8
3,425,456	-		LRK53_RS15630	0.36	+0.5
3,425,456	-		LRK53_RS15630	0.36	-1.6
3,425,840	+		LRK53_RS15630	0.87	-0.1
3,425,841	-		LRK53_RS15630	0.87	+0.9
3,425,899	+				+0.0
3,425,899	+				+0.6
3,425,899	+				-0.5
3,425,972	+				-0.7
3,425,973	-				+0.2
3,425,973	-				-0.0
3,425,973	-				-2.0
3,425,973	-				+0.0
3,425,973	-				-1.5
3,426,006	+				-0.3
3,426,007	-				-1.7