Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15600

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,417,703	-		LRK53_RS15595	0.58	+0.2
3,417,903	+		LRK53_RS15595	0.72	+2.7
3,417,903	+		LRK53_RS15595	0.72	-1.0
3,417,903	+		LRK53_RS15595	0.72	-0.5
3,417,903	+		LRK53_RS15595	0.72	-0.4
3,417,903	+		LRK53_RS15595	0.72	+0.9
3,417,903	+		LRK53_RS15595	0.72	-0.4
3,417,903	+		LRK53_RS15595	0.72	+0.2
3,417,903	+		LRK53_RS15595	0.72	+0.7
3,417,904	-		LRK53_RS15595	0.72	+1.3
3,417,904	-		LRK53_RS15595	0.72	+0.3
3,417,904	-		LRK53_RS15595	0.72	-1.2
3,417,904	-		LRK53_RS15595	0.72	-0.9
3,417,904	-		LRK53_RS15595	0.72	+1.4
3,417,904	-		LRK53_RS15595	0.72	-1.4
3,417,904	-		LRK53_RS15595	0.72	-0.4
3,417,904	-		LRK53_RS15595	0.72	-1.1
3,417,904	-		LRK53_RS15595	0.72	+0.3
3,417,904	-		LRK53_RS15595	0.72	-1.4
3,417,904	-		LRK53_RS15595	0.72	-1.4
3,417,904	-		LRK53_RS15595	0.72	-0.9
3,417,904	-		LRK53_RS15595	0.72	-0.3
3,417,904	-		LRK53_RS15595	0.72	-0.3
3,417,904	-		LRK53_RS15595	0.72	-2.1
3,417,904	-		LRK53_RS15595	0.72	-1.0
3,417,904	-		LRK53_RS15595	0.72	-1.4
3,418,077	+		LRK53_RS15595	0.84	-0.5
3,418,077	+		LRK53_RS15595	0.84	-1.2
3,418,077	+		LRK53_RS15595	0.84	-0.7
3,418,077	+		LRK53_RS15595	0.84	-0.2
3,418,077	+		LRK53_RS15595	0.84	+1.0
3,418,078	-		LRK53_RS15595	0.84	-1.2
3,418,078	-		LRK53_RS15595	0.84	-0.8
3,418,374	+				+2.0
3,418,374	+				-1.2
3,418,374	+				-0.4
3,418,374	+				-1.5
3,418,374	+				+0.2
3,418,374	+				-1.2
3,418,374	+				-0.9
3,418,374	+				-2.2
3,418,374	+				-1.3
3,418,374	+				-0.7
3,418,374	+				-0.6
3,418,374	+				+0.1
3,418,374	+				-0.0
3,418,374	+				+0.7
3,418,374	+				-1.8
3,418,375	-				+0.2
3,418,375	-				-1.2
3,418,375	-				-0.8
3,418,375	-				-0.2
3,418,375	-				+1.8
3,418,375	-				-0.3
3,418,375	-				+0.7
3,418,375	-				-0.2
3,418,375	-				+0.7
3,418,375	-				-0.9
3,418,375	-				-1.0
3,418,375	-				-1.6
3,418,375	-				+0.7
3,418,375	-				+0.1
3,418,375	-				-0.4
3,418,375	-				+0.2
3,418,375	-				-1.9
3,418,375	-				-0.2
3,418,375	-				+0.0
3,418,378	+				-1.2
3,418,378	+				+0.1
3,418,378	+				-0.9
3,418,378	+				-2.1
3,418,379	-				-1.1
3,418,379	-				-1.2
3,418,379	-				+1.7
3,418,379	-				-1.1
3,418,379	-				-0.8
3,418,379	-				-0.3
3,418,379	-				+1.4
3,418,379	-				-1.1
3,418,379	-				-0.7
3,418,379	-				-1.4
3,418,425	+				+1.6
3,418,425	+				+1.1
3,418,425	+				-0.4
3,418,425	+				+2.4
3,418,425	+				-0.0
3,418,425	+				-1.8
3,418,425	+				-1.6
3,418,425	+				-2.2
3,418,426	-				-0.2
3,418,426	-				-0.8
3,418,426	-				-0.6
3,418,426	-				-0.7
3,418,426	-				+0.7
3,418,426	-				-1.8
3,418,426	-				-0.8
3,418,426	-				-0.7
3,418,459	+				+0.0
3,418,459	+				-2.5
3,418,460	-				-0.1
3,418,460	-				-2.4
3,418,620	+				-1.1
3,418,620	+				-1.6
3,418,620	+				-0.9
3,418,620	+				-1.3
3,418,620	+				+0.2
3,418,620	+				+0.7
3,418,620	+				+2.7
3,418,620	+				+0.6
3,418,620	+				-0.9
3,418,620	+				-1.2
3,418,620	+				+1.0
3,418,620	+				+0.6
3,418,620	+				-1.0
3,418,620	+				+0.2
3,418,620	+				-1.7
3,418,620	+				-1.2
3,418,620	+				+0.4
3,418,620	+				-0.9
3,418,620	+				-0.8
3,418,621	-				-1.7
3,418,621	-				-1.7
3,418,621	-				+1.0
3,418,621	-				-1.6
3,418,621	-				+0.0
3,418,621	-				-2.0
3,418,621	-				+1.4
3,418,621	-				-0.2
3,418,621	-				-1.1
3,418,621	-				-2.1
3,418,621	-				-1.9
3,418,621	-				-2.2
3,418,621	-				-1.4
3,418,621	-				-1.8
3,418,621	-				-1.7
3,418,621	-				-0.6
3,418,621	-				+1.0
3,418,621	-				+1.0
3,418,621	-				-0.5
3,418,782	+				+0.8
3,418,782	+				+0.4
3,418,782	+				-0.7
3,418,783	-				+0.4
3,418,783	-				-1.0
3,418,854	+		LRK53_RS15600	0.12	-0.4
3,418,854	+		LRK53_RS15600	0.12	-2.8
3,419,211	+		LRK53_RS15600	0.32	-1.1
3,419,212	-		LRK53_RS15600	0.32	-1.2
3,419,361	+		LRK53_RS15600	0.40	-1.2
3,419,361	+		LRK53_RS15600	0.40	-0.7
3,419,361	+		LRK53_RS15600	0.40	+0.0
3,419,361	+		LRK53_RS15600	0.40	-1.1
3,419,361	+		LRK53_RS15600	0.40	-0.2
3,419,362	-		LRK53_RS15600	0.40	+0.4
3,419,362	-		LRK53_RS15600	0.40	-0.4
3,419,362	-		LRK53_RS15600	0.40	+1.0
3,419,466	+		LRK53_RS15600	0.45	-2.7
3,419,466	+		LRK53_RS15600	0.45	+0.4
3,419,466	+		LRK53_RS15600	0.45	-0.8
3,419,466	+		LRK53_RS15600	0.45	-0.2
3,419,466	+		LRK53_RS15600	0.45	-1.6
3,419,466	+		LRK53_RS15600	0.45	-0.6
3,419,466	+		LRK53_RS15600	0.45	-0.1
3,419,467	-		LRK53_RS15600	0.46	+0.1
3,419,467	-		LRK53_RS15600	0.46	+1.4
3,419,467	-		LRK53_RS15600	0.46	-1.7
3,419,467	-		LRK53_RS15600	0.46	-0.4
3,419,467	-		LRK53_RS15600	0.46	-2.1
3,419,467	-		LRK53_RS15600	0.46	-1.8
3,419,467	-		LRK53_RS15600	0.46	-2.4
3,419,523	+		LRK53_RS15600	0.49	+1.9
3,419,523	+		LRK53_RS15600	0.49	-4.0
3,419,523	+		LRK53_RS15600	0.49	-0.6
3,419,523	+		LRK53_RS15600	0.49	-0.2
3,419,523	+		LRK53_RS15600	0.49	-1.0
3,419,524	-		LRK53_RS15600	0.49	-1.2
3,419,526	+		LRK53_RS15600	0.49	-1.5
3,419,526	+		LRK53_RS15600	0.49	-1.0
3,419,527	-		LRK53_RS15600	0.49	-0.8
3,419,527	-		LRK53_RS15600	0.49	+1.0
3,419,527	-		LRK53_RS15600	0.49	+1.6
3,419,527	-		LRK53_RS15600	0.49	+0.3
3,419,527	-		LRK53_RS15600	0.49	+1.0
3,419,527	-		LRK53_RS15600	0.49	-0.8
3,419,527	-		LRK53_RS15600	0.49	-0.7
3,419,527	-		LRK53_RS15600	0.49	-0.3
3,419,527	-		LRK53_RS15600	0.49	-0.7
3,419,760	+		LRK53_RS15600	0.62	+2.0
3,419,760	+		LRK53_RS15600	0.62	+1.2
3,419,760	+		LRK53_RS15600	0.62	+0.2
3,419,760	+		LRK53_RS15600	0.62	+0.1
3,419,760	+		LRK53_RS15600	0.62	-2.2
3,419,760	+		LRK53_RS15600	0.62	-1.0
3,419,760	+		LRK53_RS15600	0.62	-1.2
3,419,760	+		LRK53_RS15600	0.62	-1.4
3,419,761	-		LRK53_RS15600	0.62	-0.4
3,419,761	-		LRK53_RS15600	0.62	-1.7
3,419,761	-		LRK53_RS15600	0.62	-0.2
3,419,761	-		LRK53_RS15600	0.62	+1.4
3,419,761	-		LRK53_RS15600	0.62	-0.2
3,419,761	-		LRK53_RS15600	0.62	-0.6
3,419,761	-		LRK53_RS15600	0.62	-0.4
3,420,126	+		LRK53_RS15600	0.82	-0.6
3,420,126	+		LRK53_RS15600	0.82	+0.4
3,420,126	+		LRK53_RS15600	0.82	-1.1
3,420,126	+		LRK53_RS15600	0.82	-0.7
3,420,126	+		LRK53_RS15600	0.82	-0.4
3,420,126	+		LRK53_RS15600	0.82	-0.2
3,420,126	+		LRK53_RS15600	0.82	+1.0
3,420,126	+		LRK53_RS15600	0.82	-0.3
3,420,126	+		LRK53_RS15600	0.82	-0.5
3,420,126	+		LRK53_RS15600	0.82	-2.8
3,420,127	-		LRK53_RS15600	0.82	-1.6
3,420,127	-		LRK53_RS15600	0.82	+1.7
3,420,127	-		LRK53_RS15600	0.82	-0.5
3,420,127	-		LRK53_RS15600	0.82	-0.2
3,420,127	-		LRK53_RS15600	0.82	-0.8
3,420,127	-		LRK53_RS15600	0.82	-0.9
3,420,127	-		LRK53_RS15600	0.82	+0.2
3,420,127	-		LRK53_RS15600	0.82	+0.8
3,420,127	-		LRK53_RS15600	0.82	-1.0
3,420,204	+		LRK53_RS15600	0.86	+0.8
3,420,204	+		LRK53_RS15600	0.86	-0.2
3,420,204	+		LRK53_RS15600	0.86	+0.4
3,420,204	+		LRK53_RS15600	0.86	-2.8
3,420,204	+		LRK53_RS15600	0.86	-1.4
3,420,204	+		LRK53_RS15600	0.86	+0.2
3,420,204	+		LRK53_RS15600	0.86	-0.1
3,420,204	+		LRK53_RS15600	0.86	-0.3
3,420,204	+		LRK53_RS15600	0.86	+0.7
3,420,204	+		LRK53_RS15600	0.86	-2.7
3,420,204	+		LRK53_RS15600	0.86	-2.7
3,420,204	+		LRK53_RS15600	0.86	+0.2
3,420,205	-		LRK53_RS15600	0.86	-1.0
3,420,205	-		LRK53_RS15600	0.86	+0.7
3,420,205	-		LRK53_RS15600	0.86	+0.1
3,420,315	+				+0.2
3,420,315	+				-3.2
3,420,315	+				+0.4
3,420,315	+				-0.3
3,420,316	-				-3.4
3,420,316	-				+0.6
3,420,508	+				-0.1
3,420,508	+				-0.7
3,420,508	+				-1.4
3,420,508	+				-1.6
3,420,509	-				-2.7
3,420,509	-				-1.7
3,420,509	-				-1.2
3,420,509	-				+0.2
3,420,509	-				-0.7
3,420,509	-				-1.5
3,420,509	-				+0.4
3,420,739	+				-0.2
3,420,739	+				-1.1
3,420,739	+				-1.4
3,420,739	+				-0.4
3,420,763	+				-1.2
3,420,763	+				-1.5
3,420,763	+				-0.1
3,420,786	+				+0.2
3,420,787	-				-1.2
3,420,817	+				-1.3
3,420,817	+				-3.4
3,420,817	+				-1.9
3,420,817	+				+0.4
3,420,817	+				-1.7
3,420,817	+				+1.8
3,420,817	+				-1.8
3,420,818	-				+0.1
3,420,818	-				-1.6
3,420,818	-				+2.2
3,420,818	-				+0.2
3,420,818	-				+0.3
3,420,818	-				-0.3
3,420,818	-				-0.4
3,420,818	-				-0.4
3,421,028	-		LRK53_RS15605	0.52	-1.2
3,421,028	-		LRK53_RS15605	0.52	+0.1
3,421,123	+		LRK53_RS15605	0.80	-0.8
3,421,123	+		LRK53_RS15605	0.80	-1.6
3,421,124	-		LRK53_RS15605	0.80	-0.5
3,421,124	-		LRK53_RS15605	0.80	-0.6
3,421,165	+				+0.9
3,421,165	+				-1.0
3,421,165	+				-0.6
3,421,165	+				-3.1
3,421,165	+				+0.8
3,421,165	+				+1.3
3,421,165	+				-2.3
3,421,166	-				-1.3
3,421,166	-				-0.5
3,421,166	-				+2.6
3,421,166	-				-2.8
3,421,166	-				+0.9
3,421,226	+				+0.0
3,421,226	+				-0.7
3,421,226	+				+0.4
3,421,226	+				+1.0
3,421,226	+				+0.4
3,421,226	+				-0.4
3,421,226	+				-0.4
3,421,226	+				+0.6
3,421,226	+				-0.2
3,421,226	+				-1.7
3,421,226	+				-0.3
3,421,226	+				+0.1
3,421,226	+				-1.7
3,421,227	-				+0.9
3,421,227	-				+0.0
3,421,227	-				-1.2
3,421,227	-				-0.6
3,421,227	-				-0.7
3,421,227	-				-0.1
3,421,227	-				-2.0
3,421,323	+		LRK53_RS15610	0.16	-1.0
3,421,323	+		LRK53_RS15610	0.16	+0.7
3,421,323	+		LRK53_RS15610	0.16	+0.2
3,421,323	+		LRK53_RS15610	0.16	-1.2
3,421,323	+		LRK53_RS15610	0.16	+0.6
3,421,324	-		LRK53_RS15610	0.17	-1.2
3,421,324	-		LRK53_RS15610	0.17	+1.9
3,421,324	-		LRK53_RS15610	0.17	-1.4
3,421,324	-		LRK53_RS15610	0.17	+0.4
3,421,324	-		LRK53_RS15610	0.17	-1.8
3,421,324	-		LRK53_RS15610	0.17	-2.4
3,421,324	-		LRK53_RS15610	0.17	-1.6
3,421,324	-		LRK53_RS15610	0.17	-0.7
3,421,324	-		LRK53_RS15610	0.17	+0.4
3,421,374	+		LRK53_RS15610	0.29	-1.0
3,421,374	+		LRK53_RS15610	0.29	-0.2
3,421,374	+		LRK53_RS15610	0.29	+0.7
3,421,374	+		LRK53_RS15610	0.29	+0.0
3,421,374	+		LRK53_RS15610	0.29	+0.0
3,421,374	+		LRK53_RS15610	0.29	+0.2
3,421,374	+		LRK53_RS15610	0.29	-0.4
3,421,374	+		LRK53_RS15610	0.29	-0.4
3,421,374	+		LRK53_RS15610	0.29	+0.0
3,421,374	+		LRK53_RS15610	0.29	+0.1
3,421,374	+		LRK53_RS15610	0.29	-3.2
3,421,374	+		LRK53_RS15610	0.29	+1.4
3,421,374	+		LRK53_RS15610	0.29	-0.8
3,421,374	+		LRK53_RS15610	0.29	-1.5
3,421,374	+		LRK53_RS15610	0.29	-0.3
3,421,374	+		LRK53_RS15610	0.29	-0.0
3,421,374	+		LRK53_RS15610	0.29	+0.0
3,421,374	+		LRK53_RS15610	0.29	-0.0
3,421,374	+		LRK53_RS15610	0.29	+0.0
3,421,374	+		LRK53_RS15610	0.29	+0.4
3,421,375	-		LRK53_RS15610	0.29	-1.9
3,421,375	-		LRK53_RS15610	0.29	-0.2
3,421,375	-		LRK53_RS15610	0.29	-0.1
3,421,375	-		LRK53_RS15610	0.29	+0.0
3,421,375	-		LRK53_RS15610	0.29	+2.0
3,421,375	-		LRK53_RS15610	0.29	-1.0
3,421,375	-		LRK53_RS15610	0.29	-0.8
3,421,375	-		LRK53_RS15610	0.29	-1.7
3,421,375	-		LRK53_RS15610	0.29	-0.8
3,421,375	-		LRK53_RS15610	0.29	+0.2
3,421,375	-		LRK53_RS15610	0.29	+0.2
3,421,375	-		LRK53_RS15610	0.29	-0.4
3,421,375	-		LRK53_RS15610	0.29	-1.0
3,421,375	-		LRK53_RS15610	0.29	+0.1
3,421,410	+		LRK53_RS15610	0.38	-1.3
3,421,410	+		LRK53_RS15610	0.38	+0.4
3,421,410	+		LRK53_RS15610	0.38	-1.7
3,421,410	+		LRK53_RS15610	0.38	-0.8
3,421,410	+		LRK53_RS15610	0.38	-1.0
3,421,410	+		LRK53_RS15610	0.38	-0.1
3,421,411	-		LRK53_RS15610	0.38	-0.9
3,421,411	-		LRK53_RS15610	0.38	-2.4
3,421,411	-		LRK53_RS15610	0.38	-0.6
3,421,411	-		LRK53_RS15610	0.38	-1.6
3,421,420	+		LRK53_RS15610	0.40	-0.9
3,421,420	+		LRK53_RS15610	0.40	+0.6