Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15525

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,400,845	+		LRK53_RS15520	0.50	-2.1
3,400,845	+		LRK53_RS15520	0.50	-2.1
3,400,845	+		LRK53_RS15520	0.50	+0.4
3,400,845	+		LRK53_RS15520	0.50	-0.6
3,400,845	+		LRK53_RS15520	0.50	+0.2
3,400,845	+		LRK53_RS15520	0.50	+0.3
3,400,845	+		LRK53_RS15520	0.50	-2.0
3,400,846	-		LRK53_RS15520	0.50	-0.7
3,400,846	-		LRK53_RS15520	0.50	+2.0
3,401,052	+		LRK53_RS15520	0.65	-0.6
3,401,052	+		LRK53_RS15520	0.65	-1.9
3,401,052	+		LRK53_RS15520	0.65	+1.1
3,401,052	+		LRK53_RS15520	0.65	+0.0
3,401,052	+		LRK53_RS15520	0.65	-1.0
3,401,052	+		LRK53_RS15520	0.65	+0.2
3,401,052	+		LRK53_RS15520	0.65	-0.8
3,401,053	-		LRK53_RS15520	0.65	-1.2
3,401,053	-		LRK53_RS15520	0.65	+0.2
3,401,053	-		LRK53_RS15520	0.65	-0.7
3,401,083	-		LRK53_RS15520	0.67	+0.6
3,401,124	+		LRK53_RS15520	0.70	-1.1
3,401,124	+		LRK53_RS15520	0.70	-0.4
3,401,124	+		LRK53_RS15520	0.70	-1.4
3,401,124	+		LRK53_RS15520	0.70	-1.5
3,401,124	+		LRK53_RS15520	0.70	-2.8
3,401,124	+		LRK53_RS15520	0.70	-1.1
3,401,124	+		LRK53_RS15520	0.70	-0.5
3,401,124	+		LRK53_RS15520	0.70	-2.5
3,401,125	-		LRK53_RS15520	0.70	-0.4
3,401,125	-		LRK53_RS15520	0.70	-0.3
3,401,125	-		LRK53_RS15520	0.70	-1.6
3,401,318	-		LRK53_RS15520	0.83	-3.2
3,401,318	-		LRK53_RS15520	0.83	-1.6
3,401,367	+		LRK53_RS15520	0.87	-1.3
3,401,367	+		LRK53_RS15520	0.87	+0.4
3,401,367	+		LRK53_RS15520	0.87	+0.4
3,401,367	+		LRK53_RS15520	0.87	-0.1
3,401,367	+		LRK53_RS15520	0.87	+0.9
3,401,367	+		LRK53_RS15520	0.87	+0.4
3,401,367	+		LRK53_RS15520	0.87	+0.1
3,401,367	+		LRK53_RS15520	0.87	-1.7
3,401,367	+		LRK53_RS15520	0.87	+0.9
3,401,368	-		LRK53_RS15520	0.87	-0.3
3,401,368	-		LRK53_RS15520	0.87	-2.4
3,401,368	-		LRK53_RS15520	0.87	+0.4
3,401,368	-		LRK53_RS15520	0.87	-1.8
3,401,368	-		LRK53_RS15520	0.87	+0.8
3,401,368	-		LRK53_RS15520	0.87	-1.2
3,401,368	-		LRK53_RS15520	0.87	-1.0
3,401,368	-		LRK53_RS15520	0.87	+0.6
3,401,368	-		LRK53_RS15520	0.87	+0.6
3,401,488	+				+1.2
3,401,488	+				-1.9
3,401,553	+				-0.3
3,401,666	+				-0.1
3,401,666	+				-1.5
3,401,666	+				+0.0
3,401,666	+				+0.2
3,401,667	-				-1.1
3,401,667	-				+0.8
3,401,667	-				+0.0
3,401,695	+				-0.9
3,401,695	+				+0.2
3,401,695	+				-0.1
3,401,695	+				-0.1
3,401,695	+				-0.3
3,401,695	+				-1.5
3,401,695	+				-0.6
3,401,695	+				+0.5
3,401,695	+				+1.2
3,401,695	+				-2.1
3,401,696	-				+0.0
3,401,696	-				+0.2
3,401,696	-				+0.6
3,401,696	-				+1.7
3,401,696	-				-0.1
3,401,696	-				-0.6
3,401,696	-				-1.0
3,401,696	-				-2.6
3,401,696	-				+0.4
3,401,696	-				-2.7
3,401,732	-				-1.6
3,401,828	+				-0.6
3,401,828	+				-0.4
3,401,828	+				-0.3
3,401,828	+				-0.3
3,401,829	-				+0.5
3,401,829	-				-1.6
3,401,829	-				-0.9
3,401,829	-				+0.9
3,401,999	+		LRK53_RS15525	0.17	+0.4
3,401,999	+		LRK53_RS15525	0.17	+1.7
3,402,000	-		LRK53_RS15525	0.17	+0.2
3,402,000	-		LRK53_RS15525	0.17	+1.8
3,402,152	+		LRK53_RS15525	0.26	-1.0
3,402,152	+		LRK53_RS15525	0.26	-0.3
3,402,152	+		LRK53_RS15525	0.26	-0.3
3,402,152	+		LRK53_RS15525	0.26	-2.5
3,402,152	+		LRK53_RS15525	0.26	+0.9
3,402,152	+		LRK53_RS15525	0.26	+0.9
3,402,153	-		LRK53_RS15525	0.26	-1.0
3,402,300	-		LRK53_RS15525	0.35	+0.1
3,402,300	-		LRK53_RS15525	0.35	-0.4
3,402,359	+		LRK53_RS15525	0.39	-0.1
3,402,360	-		LRK53_RS15525	0.39	-0.6
3,402,398	+		LRK53_RS15525	0.41	+0.9
3,402,398	+		LRK53_RS15525	0.41	-0.3
3,402,398	+		LRK53_RS15525	0.41	-2.1
3,402,398	+		LRK53_RS15525	0.41	+0.0
3,402,398	+		LRK53_RS15525	0.41	+0.0
3,402,398	+		LRK53_RS15525	0.41	-0.1
3,402,398	+		LRK53_RS15525	0.41	+0.6
3,402,399	-		LRK53_RS15525	0.41	+0.7
3,402,399	-		LRK53_RS15525	0.41	-0.9
3,402,399	-		LRK53_RS15525	0.41	-1.4
3,402,408	-		LRK53_RS15525	0.41	-1.3
3,402,464	+		LRK53_RS15525	0.45	+0.2
3,402,464	+		LRK53_RS15525	0.45	+0.7
3,402,464	+		LRK53_RS15525	0.45	-0.4
3,402,465	-		LRK53_RS15525	0.45	-0.4
3,402,465	-		LRK53_RS15525	0.45	+1.4
3,402,465	-		LRK53_RS15525	0.45	-0.6
3,402,480	-		LRK53_RS15525	0.46	-1.1
3,402,620	+		LRK53_RS15525	0.54	+1.1
3,402,621	-		LRK53_RS15525	0.54	-0.8
3,402,621	-		LRK53_RS15525	0.54	-0.3
3,402,621	-		LRK53_RS15525	0.54	-0.8
3,402,644	+		LRK53_RS15525	0.56	-0.3
3,402,644	+		LRK53_RS15525	0.56	+0.2
3,402,644	+		LRK53_RS15525	0.56	+1.0
3,402,645	-		LRK53_RS15525	0.56	+0.7
3,402,645	-		LRK53_RS15525	0.56	+0.0
3,402,645	-		LRK53_RS15525	0.56	-0.6
3,402,645	-		LRK53_RS15525	0.56	+0.2
3,402,645	-		LRK53_RS15525	0.56	+0.3
3,402,734	+		LRK53_RS15525	0.61	-0.1
3,402,735	-		LRK53_RS15525	0.61	+0.0
3,402,735	-		LRK53_RS15525	0.61	-0.8
3,402,735	-		LRK53_RS15525	0.61	-0.9
3,402,777	-		LRK53_RS15525	0.63	-1.8
3,402,788	+		LRK53_RS15525	0.64	-1.3
3,402,806	+		LRK53_RS15525	0.65	-1.8
3,402,807	-		LRK53_RS15525	0.65	+0.9
3,402,807	-		LRK53_RS15525	0.65	-0.3
3,402,807	-		LRK53_RS15525	0.65	-0.4
3,402,807	-		LRK53_RS15525	0.65	-0.3
3,402,902	+		LRK53_RS15525	0.71	-2.3
3,402,902	+		LRK53_RS15525	0.71	-2.5
3,402,902	+		LRK53_RS15525	0.71	-1.7
3,402,902	+		LRK53_RS15525	0.71	-0.2
3,402,902	+		LRK53_RS15525	0.71	+0.0
3,402,902	+		LRK53_RS15525	0.71	-0.1
3,402,902	+		LRK53_RS15525	0.71	-1.8
3,402,902	+		LRK53_RS15525	0.71	+0.7
3,402,902	+		LRK53_RS15525	0.71	+0.2
3,402,903	-		LRK53_RS15525	0.71	-1.3
3,402,903	-		LRK53_RS15525	0.71	-1.3
3,402,903	-		LRK53_RS15525	0.71	-0.8
3,402,903	-		LRK53_RS15525	0.71	-1.0
3,402,903	-		LRK53_RS15525	0.71	-0.6
3,402,903	-		LRK53_RS15525	0.71	+0.6
3,402,903	-		LRK53_RS15525	0.71	-2.0
3,402,905	+		LRK53_RS15525	0.71	-0.1
3,402,905	+		LRK53_RS15525	0.71	-1.2
3,402,905	+		LRK53_RS15525	0.71	+0.0
3,402,906	-		LRK53_RS15525	0.71	-1.6
3,402,906	-		LRK53_RS15525	0.71	-1.4
3,402,962	+		LRK53_RS15525	0.74	-0.9
3,402,962	+		LRK53_RS15525	0.74	-2.1
3,402,962	+		LRK53_RS15525	0.74	+0.6
3,402,962	+		LRK53_RS15525	0.74	-1.4
3,402,962	+		LRK53_RS15525	0.74	-1.1
3,402,962	+		LRK53_RS15525	0.74	-1.1
3,402,962	+		LRK53_RS15525	0.74	+0.7
3,402,962	+		LRK53_RS15525	0.74	-1.0
3,402,963	-		LRK53_RS15525	0.75	-0.9
3,402,963	-		LRK53_RS15525	0.75	-1.4
3,402,963	-		LRK53_RS15525	0.75	-1.6
3,402,963	-		LRK53_RS15525	0.75	-0.7
3,402,963	-		LRK53_RS15525	0.75	+0.0
3,402,963	-		LRK53_RS15525	0.75	-0.3
3,402,963	-		LRK53_RS15525	0.75	-0.1
3,402,963	-		LRK53_RS15525	0.75	-0.0
3,402,963	-		LRK53_RS15525	0.75	-0.2
3,402,963	-		LRK53_RS15525	0.75	-1.8
3,402,963	-		LRK53_RS15525	0.75	-0.2
3,402,963	-		LRK53_RS15525	0.75	-1.5
3,402,965	+		LRK53_RS15525	0.75	+0.2
3,402,966	-		LRK53_RS15525	0.75	-0.5
3,402,966	-		LRK53_RS15525	0.75	-1.0
3,403,068	+		LRK53_RS15525	0.81	-0.7
3,403,068	+		LRK53_RS15525	0.81	-1.1
3,403,069	-		LRK53_RS15525	0.81	-2.1
3,403,069	-		LRK53_RS15525	0.81	-1.1
3,403,109	+		LRK53_RS15525	0.83	+0.2
3,403,109	+		LRK53_RS15525	0.83	-0.9
3,403,109	+		LRK53_RS15525	0.83	-0.4
3,403,109	+		LRK53_RS15525	0.83	-1.3
3,403,118	+		LRK53_RS15525	0.84	-1.1
3,403,118	+		LRK53_RS15525	0.84	-2.0
3,403,118	+		LRK53_RS15525	0.84	-0.3
3,403,119	-		LRK53_RS15525	0.84	+0.3
3,403,119	-		LRK53_RS15525	0.84	-0.6
3,403,199	+		LRK53_RS15525	0.89	-0.6
3,403,199	+		LRK53_RS15525	0.89	-1.0
3,403,199	+		LRK53_RS15525	0.89	-1.7
3,403,199	+		LRK53_RS15525	0.89	+2.3
3,403,200	-		LRK53_RS15525	0.89	+0.0
3,403,200	-		LRK53_RS15525	0.89	-2.6
3,403,304	+				-1.3
3,403,304	+				-0.9
3,403,305	-				-2.2
3,403,652	+		LRK53_RS15530	0.19	+0.4
3,403,653	-		LRK53_RS15530	0.19	+2.0
3,403,665	-		LRK53_RS15530	0.21	-0.5
3,403,814	+		LRK53_RS15530	0.42	-2.8
3,403,814	+		LRK53_RS15530	0.42	-0.6
3,403,814	+		LRK53_RS15530	0.42	+0.2
3,403,814	+		LRK53_RS15530	0.42	-1.3
3,403,814	+		LRK53_RS15530	0.42	-1.4
3,403,815	-		LRK53_RS15530	0.42	-1.0
3,403,815	-		LRK53_RS15530	0.42	-2.3
3,403,815	-		LRK53_RS15530	0.42	-0.8
3,403,815	-		LRK53_RS15530	0.42	-0.6
3,403,815	-		LRK53_RS15530	0.42	+0.0
3,404,072	+		LRK53_RS15530	0.78	+0.6
3,404,072	+		LRK53_RS15530	0.78	-1.1
3,404,072	+		LRK53_RS15530	0.78	-1.9
3,404,072	+		LRK53_RS15530	0.78	+1.6
3,404,072	+		LRK53_RS15530	0.78	-1.5
3,404,072	+		LRK53_RS15530	0.78	-1.5
3,404,073	-		LRK53_RS15530	0.78	-0.1
3,404,073	-		LRK53_RS15530	0.78	-1.4
3,404,073	-		LRK53_RS15530	0.78	+0.0
3,404,073	-		LRK53_RS15530	0.78	+0.6
3,404,073	-		LRK53_RS15530	0.78	-0.0
3,404,090	+		LRK53_RS15530	0.80	-0.8
3,404,090	+		LRK53_RS15530	0.80	-0.9
3,404,090	+		LRK53_RS15530	0.80	+0.0
3,404,090	+		LRK53_RS15530	0.80	+0.4
3,404,090	+		LRK53_RS15530	0.80	+0.0
3,404,090	+		LRK53_RS15530	0.80	+0.3
3,404,090	+		LRK53_RS15530	0.80	+0.5
3,404,090	+		LRK53_RS15530	0.80	-0.3
3,404,090	+		LRK53_RS15530	0.80	-0.4
3,404,090	+		LRK53_RS15530	0.80	-0.7
3,404,090	+		LRK53_RS15530	0.80	-1.0
3,404,090	+		LRK53_RS15530	0.80	+0.7
3,404,090	+		LRK53_RS15530	0.80	-2.7
3,404,090	+		LRK53_RS15530	0.80	+0.1
3,404,090	+		LRK53_RS15530	0.80	+0.2
3,404,090	+		LRK53_RS15530	0.80	-0.4
3,404,090	+		LRK53_RS15530	0.80	+0.2
3,404,091	-		LRK53_RS15530	0.80	+1.7
3,404,091	-		LRK53_RS15530	0.80	-0.6
3,404,091	-		LRK53_RS15530	0.80	+1.0
3,404,091	-		LRK53_RS15530	0.80	-0.7
3,404,091	-		LRK53_RS15530	0.80	-1.9
3,404,179	+				-0.4
3,404,187	-				-1.0
3,404,187	-				-0.1
3,404,187	-				+0.0
3,404,344	+				-0.1
3,404,344	+				+0.2
3,404,344	+				+0.0
3,404,344	+				+0.0
3,404,344	+				+1.6
3,404,344	+				-0.6
3,404,345	-				-0.7
3,404,345	-				-1.6
3,404,345	-				-1.4
3,404,345	-				+0.7