Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15380

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,358,307	+		LRK53_RS15375	0.27	-2.0
3,358,307	+		LRK53_RS15375	0.27	-0.1
3,358,331	+		LRK53_RS15375	0.28	-0.1
3,358,331	+		LRK53_RS15375	0.28	-0.4
3,358,332	-		LRK53_RS15375	0.28	+1.7
3,358,332	-		LRK53_RS15375	0.28	-1.1
3,358,334	+		LRK53_RS15375	0.29	-0.3
3,358,517	+		LRK53_RS15375	0.43	+2.7
3,358,517	+		LRK53_RS15375	0.43	-0.6
3,358,517	+		LRK53_RS15375	0.43	-1.9
3,358,517	+		LRK53_RS15375	0.43	-0.9
3,358,517	+		LRK53_RS15375	0.43	-0.2
3,358,517	+		LRK53_RS15375	0.43	-1.3
3,358,517	+		LRK53_RS15375	0.43	-0.4
3,358,517	+		LRK53_RS15375	0.43	-0.1
3,358,518	-		LRK53_RS15375	0.43	-0.9
3,358,518	-		LRK53_RS15375	0.43	-1.1
3,358,518	-		LRK53_RS15375	0.43	-0.2
3,358,518	-		LRK53_RS15375	0.43	+1.4
3,358,518	-		LRK53_RS15375	0.43	+0.0
3,358,523	+		LRK53_RS15375	0.43	-0.3
3,358,523	+		LRK53_RS15375	0.43	-0.9
3,358,524	-		LRK53_RS15375	0.43	+0.7
3,358,550	+		LRK53_RS15375	0.45	+1.0
3,358,551	-		LRK53_RS15375	0.45	+0.4
3,358,568	+		LRK53_RS15375	0.47	-0.4
3,358,568	+		LRK53_RS15375	0.47	-0.6
3,358,568	+		LRK53_RS15375	0.47	-1.1
3,358,568	+		LRK53_RS15375	0.47	-1.1
3,358,569	-		LRK53_RS15375	0.47	-1.6
3,358,569	-		LRK53_RS15375	0.47	-1.4
3,358,569	-		LRK53_RS15375	0.47	-0.6
3,358,569	-		LRK53_RS15375	0.47	-2.0
3,358,569	-		LRK53_RS15375	0.47	+0.6
3,358,829	+		LRK53_RS15375	0.67	-0.9
3,358,829	+		LRK53_RS15375	0.67	-1.1
3,358,829	+		LRK53_RS15375	0.67	-0.4
3,358,829	+		LRK53_RS15375	0.67	-1.6
3,358,829	+		LRK53_RS15375	0.67	-2.0
3,358,829	+		LRK53_RS15375	0.67	+0.0
3,358,829	+		LRK53_RS15375	0.67	-1.5
3,358,830	-		LRK53_RS15375	0.67	-2.9
3,358,830	-		LRK53_RS15375	0.67	+0.4
3,358,830	-		LRK53_RS15375	0.67	-0.7
3,359,024	+		LRK53_RS15375	0.82	-1.1
3,359,024	+		LRK53_RS15375	0.82	+0.0
3,359,025	-		LRK53_RS15375	0.82	+0.9
3,359,025	-		LRK53_RS15375	0.82	-0.6
3,359,139	+				-1.5
3,359,139	+				+0.5
3,359,148	+				-0.7
3,359,148	+				-2.3
3,359,148	+				-0.9
3,359,148	+				-0.8
3,359,148	+				-0.0
3,359,148	+				+0.9
3,359,148	+				+0.1
3,359,148	+				-0.1
3,359,148	+				+0.7
3,359,148	+				-0.5
3,359,148	+				-0.6
3,359,148	+				-1.3
3,359,148	+				-0.4
3,359,148	+				-1.9
3,359,148	+				-0.0
3,359,148	+				-1.4
3,359,149	-				-1.0
3,359,149	-				-0.4
3,359,149	-				+0.6
3,359,149	-				+0.4
3,359,149	-				-1.2
3,359,149	-				-0.3
3,359,149	-				-0.4
3,359,149	-				+0.3
3,359,149	-				+0.0
3,359,149	-				+0.0
3,359,150	+				+0.4
3,359,150	+				+0.2
3,359,150	+				+0.2
3,359,150	+				-1.1
3,359,150	+				-1.0
3,359,151	-				-0.1
3,359,151	-				+0.6
3,359,314	+				-0.3
3,359,314	+				+1.2
3,359,315	-				-1.5
3,359,315	-				-0.5
3,359,315	-				+0.1
3,359,315	-				-0.8
3,359,599	+		LRK53_RS15380	0.26	+0.7
3,359,599	+		LRK53_RS15380	0.26	-0.4
3,359,599	+		LRK53_RS15380	0.26	-0.3
3,359,599	+		LRK53_RS15380	0.26	-0.6
3,359,599	+		LRK53_RS15380	0.26	-1.3
3,359,599	+		LRK53_RS15380	0.26	+0.2
3,359,599	+		LRK53_RS15380	0.26	+0.2
3,359,599	+		LRK53_RS15380	0.26	-1.2
3,359,599	+		LRK53_RS15380	0.26	-0.8
3,359,599	+		LRK53_RS15380	0.26	-0.2
3,359,600	-		LRK53_RS15380	0.26	-0.1
3,359,600	-		LRK53_RS15380	0.26	-0.1
3,359,600	-		LRK53_RS15380	0.26	+2.0
3,359,602	+		LRK53_RS15380	0.26	-1.4
3,359,602	+		LRK53_RS15380	0.26	-0.1
3,359,603	-		LRK53_RS15380	0.26	-0.9
3,359,603	-		LRK53_RS15380	0.26	-1.6
3,360,007	+		LRK53_RS15380	0.57	+0.7
3,360,109	+		LRK53_RS15380	0.64	-1.6
3,360,109	+		LRK53_RS15380	0.64	-1.3
3,360,110	-		LRK53_RS15380	0.64	-2.9
3,360,110	-		LRK53_RS15380	0.64	-1.2
3,360,181	+		LRK53_RS15380	0.70	+0.2
3,360,181	+		LRK53_RS15380	0.70	-0.7
3,360,181	+		LRK53_RS15380	0.70	-1.4
3,360,181	+		LRK53_RS15380	0.70	-1.5
3,360,182	-		LRK53_RS15380	0.70	-1.0
3,360,182	-		LRK53_RS15380	0.70	+0.0
3,360,182	-		LRK53_RS15380	0.70	-0.4
3,360,295	+		LRK53_RS15380	0.78	-1.9
3,360,295	+		LRK53_RS15380	0.78	+0.1
3,360,295	+		LRK53_RS15380	0.78	-1.7
3,360,295	+		LRK53_RS15380	0.78	+1.2
3,360,296	-		LRK53_RS15380	0.79	-0.0
3,360,296	-		LRK53_RS15380	0.79	-0.3
3,360,567	+				+1.2
3,360,567	+				+1.2
3,360,567	+				-0.7
3,360,567	+				-1.5
3,360,567	+				-0.2
3,360,567	+				-0.4
3,360,567	+				-0.6
3,360,567	+				+0.5
3,360,567	+				-2.2
3,360,568	-				+0.9
3,360,568	-				-1.6
3,360,568	-				+0.0
3,360,568	-				-1.7
3,360,584	+				-1.3
3,360,585	-				-1.4
3,360,585	-				-0.7
3,360,585	-				-2.3
3,360,655	+				-0.6
3,360,656	-				+1.1
3,360,656	-				-0.6
3,360,756	+				+0.4
3,360,757	-				+0.1
3,360,757	-				-0.6
3,360,864	+		LRK53_RS15385	0.15	-2.0
3,360,865	-		LRK53_RS15385	0.15	-1.7
3,360,912	+		LRK53_RS15385	0.17	+0.6
3,360,912	+		LRK53_RS15385	0.17	-1.0
3,360,912	+		LRK53_RS15385	0.17	-2.1
3,360,912	+		LRK53_RS15385	0.17	+0.1
3,360,912	+		LRK53_RS15385	0.17	-0.1
3,360,912	+		LRK53_RS15385	0.17	-0.8
3,360,912	+		LRK53_RS15385	0.17	+1.6
3,360,912	+		LRK53_RS15385	0.17	-2.3
3,360,912	+		LRK53_RS15385	0.17	-0.5
3,360,912	+		LRK53_RS15385	0.17	-1.6
3,360,912	+		LRK53_RS15385	0.17	-1.6
3,360,912	+		LRK53_RS15385	0.17	-2.2
3,360,912	+		LRK53_RS15385	0.17	-0.8
3,360,912	+		LRK53_RS15385	0.17	+0.7
3,360,912	+		LRK53_RS15385	0.17	-0.3
3,360,912	+		LRK53_RS15385	0.17	-2.4
3,360,912	+		LRK53_RS15385	0.17	-1.9
3,360,912	+		LRK53_RS15385	0.17	-0.5
3,360,912	+		LRK53_RS15385	0.17	+0.4
3,360,912	+		LRK53_RS15385	0.17	-0.7
3,360,912	+		LRK53_RS15385	0.17	-0.7
3,360,912	+		LRK53_RS15385	0.17	+0.6
3,360,912	+		LRK53_RS15385	0.17	-0.6
3,360,912	+		LRK53_RS15385	0.17	-1.3
3,360,912	+		LRK53_RS15385	0.17	-1.3
3,360,912	+		LRK53_RS15385	0.17	-1.3
3,360,913	-		LRK53_RS15385	0.17	-1.0
3,360,913	-		LRK53_RS15385	0.17	+0.1
3,360,913	-		LRK53_RS15385	0.17	+0.2
3,360,913	-		LRK53_RS15385	0.17	-0.1
3,360,913	-		LRK53_RS15385	0.17	+2.4
3,360,913	-		LRK53_RS15385	0.17	+0.7
3,360,913	-		LRK53_RS15385	0.17	-0.5
3,360,913	-		LRK53_RS15385	0.17	-0.6
3,360,913	-		LRK53_RS15385	0.17	-1.4
3,360,913	-		LRK53_RS15385	0.17	-3.5
3,360,913	-		LRK53_RS15385	0.17	-1.0
3,360,913	-		LRK53_RS15385	0.17	-0.4
3,360,913	-		LRK53_RS15385	0.17	-0.7
3,360,913	-		LRK53_RS15385	0.17	-1.3
3,360,913	-		LRK53_RS15385	0.17	+0.2
3,360,913	-		LRK53_RS15385	0.17	+0.7
3,360,913	-		LRK53_RS15385	0.17	+0.2
3,360,913	-		LRK53_RS15385	0.17	-3.0
3,360,913	-		LRK53_RS15385	0.17	-0.3
3,361,077	+		LRK53_RS15385	0.26	-2.1
3,361,077	+		LRK53_RS15385	0.26	-0.6
3,361,077	+		LRK53_RS15385	0.26	-1.2
3,361,078	-		LRK53_RS15385	0.26	-0.8
3,361,078	-		LRK53_RS15385	0.26	-1.5
3,361,078	-		LRK53_RS15385	0.26	+0.4
3,361,149	+		LRK53_RS15385	0.29	-1.9
3,361,149	+		LRK53_RS15385	0.29	-0.4
3,361,150	-		LRK53_RS15385	0.29	-0.3
3,361,150	-		LRK53_RS15385	0.29	+0.8
3,361,150	-		LRK53_RS15385	0.29	+0.7
3,361,182	+		LRK53_RS15385	0.31	-0.1
3,361,182	+		LRK53_RS15385	0.31	+0.7
3,361,182	+		LRK53_RS15385	0.31	-2.1
3,361,182	+		LRK53_RS15385	0.31	+0.6
3,361,182	+		LRK53_RS15385	0.31	-1.3
3,361,182	+		LRK53_RS15385	0.31	-1.7
3,361,182	+		LRK53_RS15385	0.31	-2.3
3,361,183	-		LRK53_RS15385	0.31	-2.4
3,361,183	-		LRK53_RS15385	0.31	+1.0
3,361,183	-		LRK53_RS15385	0.31	-1.4
3,361,183	-		LRK53_RS15385	0.31	+0.4
3,361,183	-		LRK53_RS15385	0.31	-0.4
3,361,183	-		LRK53_RS15385	0.31	+1.1
3,361,183	-		LRK53_RS15385	0.31	+2.4
3,361,210	+		LRK53_RS15385	0.33	+0.4
3,361,210	+		LRK53_RS15385	0.33	-1.3
3,361,210	+		LRK53_RS15385	0.33	-0.9
3,361,210	+		LRK53_RS15385	0.33	+0.2
3,361,210	+		LRK53_RS15385	0.33	-0.3
3,361,211	-		LRK53_RS15385	0.33	+1.6
3,361,211	-		LRK53_RS15385	0.33	-1.1
3,361,211	-		LRK53_RS15385	0.33	-1.3
3,361,211	-		LRK53_RS15385	0.33	+1.2
3,361,223	-		LRK53_RS15385	0.33	-0.1
3,361,230	+		LRK53_RS15385	0.34	-1.6
3,361,230	+		LRK53_RS15385	0.34	-0.4
3,361,230	+		LRK53_RS15385	0.34	-0.3
3,361,230	+		LRK53_RS15385	0.34	-0.6
3,361,230	+		LRK53_RS15385	0.34	-1.5
3,361,230	+		LRK53_RS15385	0.34	+1.6
3,361,230	+		LRK53_RS15385	0.34	+0.6
3,361,230	+		LRK53_RS15385	0.34	-2.5
3,361,231	-		LRK53_RS15385	0.34	-0.3
3,361,231	-		LRK53_RS15385	0.34	-0.7
3,361,231	-		LRK53_RS15385	0.34	-0.3
3,361,231	-		LRK53_RS15385	0.34	+1.2
3,361,231	-		LRK53_RS15385	0.34	+0.9
3,361,231	-		LRK53_RS15385	0.34	+1.4
3,361,231	-		LRK53_RS15385	0.34	-0.6
3,361,231	-		LRK53_RS15385	0.34	-0.9
3,361,485	+		LRK53_RS15385	0.47	-2.5
3,361,485	+		LRK53_RS15385	0.47	-0.8
3,361,485	+		LRK53_RS15385	0.47	-1.3
3,361,485	+		LRK53_RS15385	0.47	-1.8
3,361,485	+		LRK53_RS15385	0.47	-1.6
3,361,486	-		LRK53_RS15385	0.47	-1.0
3,361,486	-		LRK53_RS15385	0.47	-0.1
3,361,486	-		LRK53_RS15385	0.47	-0.1
3,361,524	+		LRK53_RS15385	0.49	+0.0
3,361,524	+		LRK53_RS15385	0.49	-2.0