Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15310

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,339,137	-		LRK53_RS15305	0.34	+0.2
3,339,324	+		LRK53_RS15305	0.48	+0.4
3,339,324	+		LRK53_RS15305	0.48	-0.5
3,339,325	-		LRK53_RS15305	0.48	-1.1
3,339,325	-		LRK53_RS15305	0.48	-0.4
3,339,325	-		LRK53_RS15305	0.48	-1.1
3,339,570	+		LRK53_RS15305	0.67	-0.6
3,339,571	-		LRK53_RS15305	0.67	+0.6
3,339,628	+		LRK53_RS15305	0.71	-0.2
3,339,629	-		LRK53_RS15305	0.71	-1.4
3,339,629	-		LRK53_RS15305	0.71	-1.0
3,339,629	-		LRK53_RS15305	0.71	-0.8
3,339,842	+		LRK53_RS15305	0.87	-0.8
3,339,862	+		LRK53_RS15305	0.88	+0.2
3,339,862	+		LRK53_RS15305	0.88	-0.8
3,339,862	+		LRK53_RS15305	0.88	-0.3
3,339,862	+		LRK53_RS15305	0.88	-2.0
3,339,862	+		LRK53_RS15305	0.88	+0.1
3,339,862	+		LRK53_RS15305	0.88	+0.1
3,339,863	-		LRK53_RS15305	0.88	-0.3
3,339,863	-		LRK53_RS15305	0.88	-2.5
3,339,863	-		LRK53_RS15305	0.88	-1.1
3,339,863	-		LRK53_RS15305	0.88	-0.1
3,339,863	-		LRK53_RS15305	0.88	-0.0
3,339,866	+		LRK53_RS15305	0.89	+0.9
3,339,866	+		LRK53_RS15305	0.89	-1.5
3,339,867	-		LRK53_RS15305	0.89	+0.5
3,339,867	-		LRK53_RS15305	0.89	-1.6
3,339,966	+				+2.6
3,339,966	+				-1.1
3,339,966	+				-0.5
3,339,966	+				-0.1
3,339,966	+				-0.9
3,339,966	+				-1.4
3,339,967	-				-1.5
3,339,967	-				-0.7
3,339,967	-				-1.9
3,339,967	-				+0.4
3,339,967	-				-0.3
3,339,967	-				+0.4
3,339,967	-				-0.1
3,339,967	-				-0.4
3,340,001	+				+0.2
3,340,002	-				-0.6
3,340,002	-				+0.0
3,340,002	-				-1.1
3,340,047	-				+0.0
3,340,052	+				-0.5
3,340,052	+				-1.9
3,340,052	+				-0.8
3,340,052	+				-0.9
3,340,052	+				-1.1
3,340,052	+				-1.5
3,340,053	-				-1.3
3,340,053	-				-0.1
3,340,053	-				-1.1
3,340,053	-				-0.6
3,340,053	-				-1.3
3,340,176	+				-1.2
3,340,177	-				-1.8
3,340,177	-				-2.2
3,340,177	-				+0.5
3,340,177	-				+2.0
3,340,195	-				-0.9
3,340,195	-				-0.1
3,340,195	-				-1.0
3,340,206	+				-0.3
3,340,206	+				-1.3
3,340,206	+				-1.0
3,340,207	-				-1.1
3,340,207	-				-1.4
3,340,398	+		LRK53_RS15310	0.11	-1.4
3,340,398	+		LRK53_RS15310	0.11	-1.1
3,340,398	+		LRK53_RS15310	0.11	-1.0
3,340,399	-		LRK53_RS15310	0.11	-1.1
3,340,437	+		LRK53_RS15310	0.12	+0.4
3,340,437	+		LRK53_RS15310	0.12	-0.7
3,340,437	+		LRK53_RS15310	0.12	-0.7
3,340,438	-		LRK53_RS15310	0.12	-1.3
3,340,486	-		LRK53_RS15310	0.14	-0.4
3,340,524	+		LRK53_RS15310	0.15	-1.9
3,340,524	+		LRK53_RS15310	0.15	-2.0
3,340,524	+		LRK53_RS15310	0.15	-1.6
3,340,524	+		LRK53_RS15310	0.15	+0.0
3,340,525	-		LRK53_RS15310	0.15	+0.1
3,340,525	-		LRK53_RS15310	0.15	-0.5
3,340,525	-		LRK53_RS15310	0.15	-1.4
3,340,525	-		LRK53_RS15310	0.15	+1.0
3,340,525	-		LRK53_RS15310	0.15	-0.1
3,340,623	+		LRK53_RS15310	0.19	-1.6
3,340,623	+		LRK53_RS15310	0.19	-2.4
3,340,623	+		LRK53_RS15310	0.19	-1.7
3,340,623	+		LRK53_RS15310	0.19	+0.4
3,340,624	-		LRK53_RS15310	0.19	-1.3
3,340,624	-		LRK53_RS15310	0.19	+0.6
3,340,624	-		LRK53_RS15310	0.19	-1.0
3,340,624	-		LRK53_RS15310	0.19	-0.3
3,340,624	-		LRK53_RS15310	0.19	-2.6
3,340,624	-		LRK53_RS15310	0.19	+0.1
3,340,728	+		LRK53_RS15310	0.23	-0.3
3,340,728	+		LRK53_RS15310	0.23	-1.4
3,340,728	+		LRK53_RS15310	0.23	+0.3
3,340,729	-		LRK53_RS15310	0.23	-0.4
3,340,729	-		LRK53_RS15310	0.23	-1.1
3,340,729	-		LRK53_RS15310	0.23	-0.9
3,340,782	+		LRK53_RS15310	0.25	-0.8
3,340,782	+		LRK53_RS15310	0.25	-1.3
3,340,782	+		LRK53_RS15310	0.25	-0.5
3,340,782	+		LRK53_RS15310	0.25	-1.1
3,340,782	+		LRK53_RS15310	0.25	-0.3
3,340,782	+		LRK53_RS15310	0.25	+0.9
3,340,783	-		LRK53_RS15310	0.25	+0.0
3,340,783	-		LRK53_RS15310	0.25	+0.9
3,340,783	-		LRK53_RS15310	0.25	-0.8
3,340,884	+		LRK53_RS15310	0.28	-0.3
3,340,885	-		LRK53_RS15310	0.28	-0.9
3,340,893	+		LRK53_RS15310	0.29	-2.5
3,340,893	+		LRK53_RS15310	0.29	+1.1
3,340,893	+		LRK53_RS15310	0.29	-0.6
3,340,893	+		LRK53_RS15310	0.29	-1.2
3,340,893	+		LRK53_RS15310	0.29	-1.2
3,340,894	-		LRK53_RS15310	0.29	-2.4
3,340,894	-		LRK53_RS15310	0.29	-0.9
3,340,894	-		LRK53_RS15310	0.29	-1.2
3,341,016	+		LRK53_RS15310	0.33	+0.0
3,341,017	-		LRK53_RS15310	0.33	-1.2
3,341,017	-		LRK53_RS15310	0.33	+0.4
3,341,031	+		LRK53_RS15310	0.34	-0.5
3,341,031	+		LRK53_RS15310	0.34	-1.4
3,341,031	+		LRK53_RS15310	0.34	+0.4
3,341,031	+		LRK53_RS15310	0.34	+1.0
3,341,031	+		LRK53_RS15310	0.34	-1.9
3,341,032	-		LRK53_RS15310	0.34	+1.2
3,341,032	-		LRK53_RS15310	0.34	-3.1
3,341,032	-		LRK53_RS15310	0.34	+0.0
3,341,032	-		LRK53_RS15310	0.34	+0.2
3,341,032	-		LRK53_RS15310	0.34	-1.5
3,341,032	-		LRK53_RS15310	0.34	+0.0
3,341,032	-		LRK53_RS15310	0.34	-1.4
3,341,049	+		LRK53_RS15310	0.34	-1.4
3,341,049	+		LRK53_RS15310	0.34	+0.0
3,341,050	-		LRK53_RS15310	0.34	-0.9
3,341,050	-		LRK53_RS15310	0.34	-0.1
3,341,118	+		LRK53_RS15310	0.37	-0.9
3,341,119	-		LRK53_RS15310	0.37	-0.9
3,341,119	-		LRK53_RS15310	0.37	+1.0
3,341,412	+		LRK53_RS15310	0.47	+0.0
3,341,412	+		LRK53_RS15310	0.47	-0.6
3,341,412	+		LRK53_RS15310	0.47	-1.1
3,341,412	+		LRK53_RS15310	0.47	-0.1
3,341,412	+		LRK53_RS15310	0.47	-1.7
3,341,412	+		LRK53_RS15310	0.47	-1.4
3,341,412	+		LRK53_RS15310	0.47	-2.8
3,341,412	+		LRK53_RS15310	0.47	-2.5
3,341,412	+		LRK53_RS15310	0.47	+0.0
3,341,412	+		LRK53_RS15310	0.47	-1.8
3,341,412	+		LRK53_RS15310	0.47	-0.4
3,341,412	+		LRK53_RS15310	0.47	+2.0
3,341,412	+		LRK53_RS15310	0.47	+0.2
3,341,412	+		LRK53_RS15310	0.47	-0.5
3,341,412	+		LRK53_RS15310	0.47	-0.8
3,341,412	+		LRK53_RS15310	0.47	-0.8
3,341,413	-		LRK53_RS15310	0.48	-0.9
3,341,413	-		LRK53_RS15310	0.48	+0.7
3,341,413	-		LRK53_RS15310	0.48	-0.3
3,341,413	-		LRK53_RS15310	0.48	+0.1
3,341,413	-		LRK53_RS15310	0.48	+0.4
3,341,413	-		LRK53_RS15310	0.48	+0.4
3,341,413	-		LRK53_RS15310	0.48	-0.3
3,341,413	-		LRK53_RS15310	0.48	-1.0
3,341,460	+		LRK53_RS15310	0.49	+0.5
3,341,460	+		LRK53_RS15310	0.49	-1.1
3,341,460	+		LRK53_RS15310	0.49	-0.3
3,341,461	-		LRK53_RS15310	0.49	-1.1
3,341,461	-		LRK53_RS15310	0.49	+1.4
3,341,502	+		LRK53_RS15310	0.51	+0.2
3,341,502	+		LRK53_RS15310	0.51	-2.1
3,341,502	+		LRK53_RS15310	0.51	-1.2
3,341,502	+		LRK53_RS15310	0.51	+0.8
3,341,503	-		LRK53_RS15310	0.51	-2.0
3,341,503	-		LRK53_RS15310	0.51	-0.2
3,341,553	+		LRK53_RS15310	0.53	-1.1
3,341,799	+		LRK53_RS15310	0.62	-1.0
3,341,799	+		LRK53_RS15310	0.62	-1.3
3,341,799	+		LRK53_RS15310	0.62	-2.3
3,341,799	+		LRK53_RS15310	0.62	+0.2
3,341,799	+		LRK53_RS15310	0.62	-1.2
3,341,799	+		LRK53_RS15310	0.62	-0.3
3,341,799	+		LRK53_RS15310	0.62	-0.6
3,341,799	+		LRK53_RS15310	0.62	-0.6
3,341,799	+		LRK53_RS15310	0.62	-0.3
3,341,800	-		LRK53_RS15310	0.62	-0.2
3,341,800	-		LRK53_RS15310	0.62	+0.4
3,341,800	-		LRK53_RS15310	0.62	-0.6
3,341,800	-		LRK53_RS15310	0.62	+0.6
3,341,800	-		LRK53_RS15310	0.62	-0.8
3,341,800	-		LRK53_RS15310	0.62	-2.1
3,342,001	-		LRK53_RS15310	0.69	-1.4
3,342,001	-		LRK53_RS15310	0.69	-0.3
3,342,001	-		LRK53_RS15310	0.69	-0.1
3,342,001	-		LRK53_RS15310	0.69	-0.1
3,342,001	-		LRK53_RS15310	0.69	-2.1
3,342,001	-		LRK53_RS15310	0.69	-0.8
3,342,228	+		LRK53_RS15310	0.77	-3.4
3,342,228	+		LRK53_RS15310	0.77	+0.3
3,342,228	+		LRK53_RS15310	0.77	-0.8
3,342,228	+		LRK53_RS15310	0.77	-1.9
3,342,228	+		LRK53_RS15310	0.77	-0.3
3,342,228	+		LRK53_RS15310	0.77	+0.4
3,342,228	+		LRK53_RS15310	0.77	+0.9
3,342,228	+		LRK53_RS15310	0.77	-1.4
3,342,228	+		LRK53_RS15310	0.77	-0.3
3,342,229	-		LRK53_RS15310	0.77	-0.4
3,342,229	-		LRK53_RS15310	0.77	-2.6
3,342,229	-		LRK53_RS15310	0.77	-0.4
3,342,229	-		LRK53_RS15310	0.77	-0.1
3,342,229	-		LRK53_RS15310	0.77	-1.1
3,342,229	-		LRK53_RS15310	0.77	-1.2
3,342,229	-		LRK53_RS15310	0.77	-2.8
3,342,229	-		LRK53_RS15310	0.77	+0.7
3,342,229	-		LRK53_RS15310	0.77	-0.7
3,342,229	-		LRK53_RS15310	0.77	-0.9
3,342,229	-		LRK53_RS15310	0.77	-1.1
3,342,229	-		LRK53_RS15310	0.77	+0.1
3,342,229	-		LRK53_RS15310	0.77	+0.7
3,342,229	-		LRK53_RS15310	0.77	+0.0
3,342,246	+		LRK53_RS15310	0.78	-0.9
3,342,246	+		LRK53_RS15310	0.78	-1.3
3,342,246	+		LRK53_RS15310	0.78	-1.6
3,342,246	+		LRK53_RS15310	0.78	-0.8
3,342,247	-		LRK53_RS15310	0.78	-0.4
3,342,247	-		LRK53_RS15310	0.78	+0.4
3,342,247	-		LRK53_RS15310	0.78	+0.5
3,342,267	+		LRK53_RS15310	0.78	-1.9
3,342,268	-		LRK53_RS15310	0.79	-1.4
3,342,268	-		LRK53_RS15310	0.79	-0.8
3,342,361	+		LRK53_RS15310	0.82	-1.1
3,342,361	+		LRK53_RS15310	0.82	-1.6
3,342,361	+		LRK53_RS15310	0.82	-0.3
3,342,362	-		LRK53_RS15310	0.82	-1.8
3,342,362	-		LRK53_RS15310	0.82	-0.1
3,342,419	+		LRK53_RS15310	0.84	-1.3
3,342,420	-		LRK53_RS15310	0.84	+0.4
3,342,420	-		LRK53_RS15310	0.84	-2.4
3,342,420	-		LRK53_RS15310	0.84	+1.4
3,342,420	-		LRK53_RS15310	0.84	-0.4
3,342,420	-		LRK53_RS15310	0.84	-1.5
3,342,423	+		LRK53_RS15310	0.84	-1.4
3,342,423	+		LRK53_RS15310	0.84	-0.4
3,342,423	+		LRK53_RS15310	0.84	-1.2
3,342,423	+		LRK53_RS15310	0.84	-1.9
3,342,423	+		LRK53_RS15310	0.84	+0.6
3,342,423	+		LRK53_RS15310	0.84	-2.9
3,342,423	+		LRK53_RS15310	0.84	-0.1
3,342,423	+		LRK53_RS15310	0.84	-0.3
3,342,423	+		LRK53_RS15310	0.84	-0.8
3,342,424	-		LRK53_RS15310	0.84	-1.7
3,342,424	-		LRK53_RS15310	0.84	-2.2
3,342,424	-		LRK53_RS15310	0.84	-1.6
3,342,424	-		LRK53_RS15310	0.84	-2.3
3,342,424	-		LRK53_RS15310	0.84	-1.1
3,342,424	-		LRK53_RS15310	0.84	-0.3
3,342,424	-		LRK53_RS15310	0.84	+1.4
3,342,424	-		LRK53_RS15310	0.84	-0.9
3,342,424	-		LRK53_RS15310	0.84	-0.4
3,342,424	-		LRK53_RS15310	0.84	+0.1
3,342,424	-		LRK53_RS15310	0.84	-0.8
3,342,424	-		LRK53_RS15310	0.84	-2.0
3,342,424	-		LRK53_RS15310	0.84	+0.2
3,342,424	-		LRK53_RS15310	0.84	-1.4
3,342,424	-		LRK53_RS15310	0.84	+0.9
3,342,424	-		LRK53_RS15310	0.84	-0.6
3,342,424	-		LRK53_RS15310	0.84	-0.3
3,342,424	-		LRK53_RS15310	0.84	-0.4
3,342,424	-		LRK53_RS15310	0.84	-1.6
3,342,424	-		LRK53_RS15310	0.84	-0.3
3,342,424	-		LRK53_RS15310	0.84	-1.4
3,342,426	+		LRK53_RS15310	0.84	-1.2
3,342,426	+		LRK53_RS15310	0.84	+0.5
3,342,426	+		LRK53_RS15310	0.84	-1.1
3,342,426	+		LRK53_RS15310	0.84	-2.7
3,342,426	+		LRK53_RS15310	0.84	-0.3
3,342,426	+		LRK53_RS15310	0.84	-0.6
3,342,426	+		LRK53_RS15310	0.84	-0.3
3,342,427	-		LRK53_RS15310	0.84	-1.2
3,342,427	-		LRK53_RS15310	0.84	-1.8
3,342,465	+		LRK53_RS15310	0.86	-0.9
3,342,465	+		LRK53_RS15310	0.86	-0.7
3,342,466	-		LRK53_RS15310	0.86	+0.0
3,342,475	+		LRK53_RS15310	0.86	-2.1
3,342,475	+		LRK53_RS15310	0.86	-2.2
3,342,475	+		LRK53_RS15310	0.86	-0.8
3,342,475	+		LRK53_RS15310	0.86	-2.7
3,342,475	+		LRK53_RS15310	0.86	-1.6
3,342,476	-		LRK53_RS15310	0.86	-1.5
3,342,476	-		LRK53_RS15310	0.86	+0.9
3,342,476	-		LRK53_RS15310	0.86	-0.6
3,342,486	+		LRK53_RS15310	0.86	-1.4
3,342,486	+		LRK53_RS15310	0.86	-0.2
3,342,486	+		LRK53_RS15310	0.86	-1.3
3,342,486	+		LRK53_RS15310	0.86	+1.9
3,342,486	+		LRK53_RS15310	0.86	+0.0
3,342,487	-		LRK53_RS15310	0.86	-1.6
3,342,487	-		LRK53_RS15310	0.86	+1.7
3,342,487	-		LRK53_RS15310	0.86	-0.1
3,342,487	-		LRK53_RS15310	0.86	+1.7
3,342,499	+		LRK53_RS15310	0.87	-1.1
3,342,499	+		LRK53_RS15310	0.87	+1.0
3,342,499	+		LRK53_RS15310	0.87	-0.1
3,342,500	-		LRK53_RS15310	0.87	-0.6
3,342,500	-		LRK53_RS15310	0.87	-0.9
3,342,500	-		LRK53_RS15310	0.87	-0.8
3,342,500	-		LRK53_RS15310	0.87	+0.5
3,342,500	-		LRK53_RS15310	0.87	-1.0
3,342,500	-		LRK53_RS15310	0.87	+0.0
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3,343,708	+				-0.9
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