Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14600

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,197,304	+		LRK53_RS14595	0.35	+0.6
3,197,304	+		LRK53_RS14595	0.35	-0.0
3,197,304	+		LRK53_RS14595	0.35	-1.4
3,197,304	+		LRK53_RS14595	0.35	-1.4
3,197,304	+		LRK53_RS14595	0.35	-1.3
3,197,304	+		LRK53_RS14595	0.35	-0.3
3,197,304	+		LRK53_RS14595	0.35	-0.9
3,197,304	+		LRK53_RS14595	0.35	+1.0
3,197,305	-		LRK53_RS14595	0.35	-0.3
3,197,305	-		LRK53_RS14595	0.35	-0.5
3,197,305	-		LRK53_RS14595	0.35	+0.9
3,197,305	-		LRK53_RS14595	0.35	+2.2
3,197,305	-		LRK53_RS14595	0.35	-1.1
3,197,305	-		LRK53_RS14595	0.35	+0.4
3,197,305	-		LRK53_RS14595	0.35	-0.2
3,197,305	-		LRK53_RS14595	0.35	-0.5
3,197,305	-		LRK53_RS14595	0.35	+0.7
3,197,305	-		LRK53_RS14595	0.35	+0.5
3,197,305	-		LRK53_RS14595	0.35	-1.3
3,197,305	-		LRK53_RS14595	0.35	-1.5
3,197,305	-		LRK53_RS14595	0.35	-1.5
3,197,305	-		LRK53_RS14595	0.35	-1.5
3,197,305	-		LRK53_RS14595	0.35	-0.0
3,197,379	+		LRK53_RS14595	0.41	-2.3
3,197,379	+		LRK53_RS14595	0.41	-1.4
3,197,379	+		LRK53_RS14595	0.41	-1.8
3,197,379	+		LRK53_RS14595	0.41	-0.3
3,197,380	-		LRK53_RS14595	0.41	+0.7
3,197,380	-		LRK53_RS14595	0.41	-1.9
3,197,380	-		LRK53_RS14595	0.41	+0.3
3,197,422	-		LRK53_RS14595	0.44	+0.7
3,197,422	-		LRK53_RS14595	0.44	-1.3
3,197,487	+		LRK53_RS14595	0.49	+0.7
3,197,487	+		LRK53_RS14595	0.49	-1.2
3,197,487	+		LRK53_RS14595	0.49	+1.5
3,197,487	+		LRK53_RS14595	0.49	-0.6
3,197,487	+		LRK53_RS14595	0.49	-0.5
3,197,487	+		LRK53_RS14595	0.49	+0.2
3,197,487	+		LRK53_RS14595	0.49	-1.4
3,197,487	+		LRK53_RS14595	0.49	-2.4
3,197,487	+		LRK53_RS14595	0.49	+0.7
3,197,488	-		LRK53_RS14595	0.49	-0.8
3,197,488	-		LRK53_RS14595	0.49	-0.5
3,197,488	-		LRK53_RS14595	0.49	-0.0
3,197,488	-		LRK53_RS14595	0.49	-0.3
3,197,488	-		LRK53_RS14595	0.49	-1.0
3,197,488	-		LRK53_RS14595	0.49	+0.4
3,197,488	-		LRK53_RS14595	0.49	+1.7
3,197,490	+		LRK53_RS14595	0.49	+0.3
3,197,490	+		LRK53_RS14595	0.49	-0.4
3,197,490	+		LRK53_RS14595	0.49	-0.9
3,197,491	-		LRK53_RS14595	0.49	-1.6
3,197,491	-		LRK53_RS14595	0.49	-1.0
3,197,491	-		LRK53_RS14595	0.49	+0.1
3,197,561	-		LRK53_RS14595	0.55	-0.3
3,197,561	-		LRK53_RS14595	0.55	-0.0
3,197,610	+		LRK53_RS14595	0.58	+1.1
3,197,610	+		LRK53_RS14595	0.58	-2.6
3,197,610	+		LRK53_RS14595	0.58	-0.9
3,197,610	+		LRK53_RS14595	0.58	+0.1
3,197,611	-		LRK53_RS14595	0.58	-0.0
3,197,611	-		LRK53_RS14595	0.58	+1.8
3,197,611	-		LRK53_RS14595	0.58	+0.2
3,197,611	-		LRK53_RS14595	0.58	+0.8
3,197,611	-		LRK53_RS14595	0.58	-1.2
3,197,740	+		LRK53_RS14595	0.68	-0.1
3,197,740	+		LRK53_RS14595	0.68	-1.3
3,197,787	+		LRK53_RS14595	0.72	+1.4
3,197,787	+		LRK53_RS14595	0.72	-0.0
3,197,787	+		LRK53_RS14595	0.72	-2.8
3,197,788	-		LRK53_RS14595	0.72	-0.2
3,197,788	-		LRK53_RS14595	0.72	-1.5
3,197,788	-		LRK53_RS14595	0.72	+2.4
3,197,856	+		LRK53_RS14595	0.77	-0.3
3,197,856	+		LRK53_RS14595	0.77	-1.0
3,197,856	+		LRK53_RS14595	0.77	-1.3
3,197,856	+		LRK53_RS14595	0.77	-0.7
3,197,857	-		LRK53_RS14595	0.77	-1.1
3,197,857	-		LRK53_RS14595	0.77	-0.0
3,197,857	-		LRK53_RS14595	0.77	-1.8
3,197,857	-		LRK53_RS14595	0.77	-0.9
3,197,857	-		LRK53_RS14595	0.77	+1.7
3,197,935	-		LRK53_RS14595	0.83	+0.2
3,197,935	-		LRK53_RS14595	0.83	-0.2
3,198,065	+				-0.3
3,198,065	+				-0.6
3,198,065	+				+0.1
3,198,066	-				-0.4
3,198,108	-				-1.7
3,198,318	+				+1.4
3,198,318	+				-0.7
3,198,318	+				-1.7
3,198,319	-				-0.0
3,198,357	+		LRK53_RS14600	0.12	-0.6
3,198,358	-		LRK53_RS14600	0.12	-1.4
3,198,358	-		LRK53_RS14600	0.12	-0.3
3,198,358	-		LRK53_RS14600	0.12	-1.8
3,198,358	-		LRK53_RS14600	0.12	-0.4
3,198,428	+		LRK53_RS14600	0.20	-0.3
3,198,428	+		LRK53_RS14600	0.20	-0.6
3,198,428	+		LRK53_RS14600	0.20	-0.2
3,198,428	+		LRK53_RS14600	0.20	-0.2
3,198,428	+		LRK53_RS14600	0.20	-0.6
3,198,428	+		LRK53_RS14600	0.20	-0.9
3,198,428	+		LRK53_RS14600	0.20	-2.5
3,198,428	+		LRK53_RS14600	0.20	-0.6
3,198,428	+		LRK53_RS14600	0.20	+2.6
3,198,429	-		LRK53_RS14600	0.20	-1.5
3,198,429	-		LRK53_RS14600	0.20	-1.1
3,198,429	-		LRK53_RS14600	0.20	-0.6
3,198,429	-		LRK53_RS14600	0.20	-1.5
3,198,435	+		LRK53_RS14600	0.21	-0.3
3,198,747	+		LRK53_RS14600	0.55	+0.0
3,198,747	+		LRK53_RS14600	0.55	-1.9
3,198,747	+		LRK53_RS14600	0.55	-2.1
3,198,747	+		LRK53_RS14600	0.55	-1.5
3,198,747	+		LRK53_RS14600	0.55	-1.9
3,198,748	-		LRK53_RS14600	0.55	+0.3
3,198,748	-		LRK53_RS14600	0.55	-1.7
3,198,748	-		LRK53_RS14600	0.55	+0.2
3,198,750	+		LRK53_RS14600	0.55	-0.5
3,198,751	-		LRK53_RS14600	0.55	+1.0
3,198,751	-		LRK53_RS14600	0.55	-1.4
3,198,827	+		LRK53_RS14600	0.63	-1.4
3,198,878	+		LRK53_RS14600	0.69	-0.5
3,198,878	+		LRK53_RS14600	0.69	-2.1
3,198,879	-		LRK53_RS14600	0.69	-0.3
3,198,902	+		LRK53_RS14600	0.72	-0.9
3,199,017	+		LRK53_RS14600	0.84	+0.5
3,199,017	+		LRK53_RS14600	0.84	-0.7
3,199,018	-		LRK53_RS14600	0.84	-1.3
3,199,018	-		LRK53_RS14600	0.84	-1.6
3,199,214	+				-1.6
3,199,214	+				+0.8
3,199,215	-				+0.0
3,199,229	+				-0.9
3,199,229	+				+1.8
3,199,229	+				-0.2
3,199,229	+				-1.4
3,199,229	+				+0.2
3,199,229	+				-0.0
3,199,230	-				-0.0
3,199,230	-				-1.3
3,199,230	-				-1.0
3,199,230	-				+0.8
3,199,230	-				+0.4
3,199,230	-				-0.2
3,199,316	+		LRK53_RS14605	0.22	+0.1
3,199,316	+		LRK53_RS14605	0.22	-1.4
3,199,316	+		LRK53_RS14605	0.22	+2.2
3,199,316	+		LRK53_RS14605	0.22	-2.4
3,199,317	-		LRK53_RS14605	0.22	-0.7
3,199,317	-		LRK53_RS14605	0.22	-2.0
3,199,317	-		LRK53_RS14605	0.22	-1.2
3,199,340	+		LRK53_RS14605	0.25	-0.5
3,199,340	+		LRK53_RS14605	0.25	+1.2
3,199,340	+		LRK53_RS14605	0.25	+1.8
3,199,340	+		LRK53_RS14605	0.25	-1.5
3,199,340	+		LRK53_RS14605	0.25	+1.0
3,199,340	+		LRK53_RS14605	0.25	-0.5
3,199,340	+		LRK53_RS14605	0.25	-1.7
3,199,341	-		LRK53_RS14605	0.25	-0.5
3,199,341	-		LRK53_RS14605	0.25	-1.3
3,199,341	-		LRK53_RS14605	0.25	-1.3
3,199,442	+		LRK53_RS14605	0.40	+1.5
3,199,442	+		LRK53_RS14605	0.40	-0.5
3,199,442	+		LRK53_RS14605	0.40	-0.5
3,199,442	+		LRK53_RS14605	0.40	-0.7
3,199,443	-		LRK53_RS14605	0.40	-0.6
3,199,443	-		LRK53_RS14605	0.40	-0.4
3,199,443	-		LRK53_RS14605	0.40	-2.3
3,199,443	-		LRK53_RS14605	0.40	-1.7
3,199,443	-		LRK53_RS14605	0.40	+1.8
3,199,769	+		LRK53_RS14605	0.86	+0.7
3,199,769	+		LRK53_RS14605	0.86	+1.4
3,199,769	+		LRK53_RS14605	0.86	-1.5
3,199,769	+		LRK53_RS14605	0.86	+2.4
3,199,769	+		LRK53_RS14605	0.86	+1.3
3,199,769	+		LRK53_RS14605	0.86	+0.5
3,199,769	+		LRK53_RS14605	0.86	-0.3
3,199,769	+		LRK53_RS14605	0.86	-0.4
3,199,769	+		LRK53_RS14605	0.86	-0.9
3,199,769	+		LRK53_RS14605	0.86	+0.8
3,199,769	+		LRK53_RS14605	0.86	-2.4
3,199,769	+		LRK53_RS14605	0.86	-0.6
3,199,769	+		LRK53_RS14605	0.86	+1.4
3,199,769	+		LRK53_RS14605	0.86	-1.2
3,199,769	+		LRK53_RS14605	0.86	-1.3
3,199,769	+		LRK53_RS14605	0.86	+1.0
3,199,769	+		LRK53_RS14605	0.86	+0.7
3,199,769	+		LRK53_RS14605	0.86	-1.3
3,199,769	+		LRK53_RS14605	0.86	-2.9
3,199,769	+		LRK53_RS14605	0.86	+0.2
3,199,769	+		LRK53_RS14605	0.86	-0.8
3,199,769	+		LRK53_RS14605	0.86	+1.0
3,199,770	-		LRK53_RS14605	0.86	-1.2
3,199,770	-		LRK53_RS14605	0.86	-0.5
3,199,770	-		LRK53_RS14605	0.86	+0.1
3,199,770	-		LRK53_RS14605	0.86	+0.5
3,199,770	-		LRK53_RS14605	0.86	-1.7
3,199,770	-		LRK53_RS14605	0.86	+0.1
3,199,770	-		LRK53_RS14605	0.86	+0.7
3,199,770	-		LRK53_RS14605	0.86	+0.6
3,199,770	-		LRK53_RS14605	0.86	-0.0
3,199,770	-		LRK53_RS14605	0.86	-1.4
3,199,770	-		LRK53_RS14605	0.86	+0.2
3,199,770	-		LRK53_RS14605	0.86	-0.2
3,199,770	-		LRK53_RS14605	0.86	-2.7
3,199,770	-		LRK53_RS14605	0.86	-2.0
3,199,770	-		LRK53_RS14605	0.86	-2.2
3,199,770	-		LRK53_RS14605	0.86	-1.4
3,199,770	-		LRK53_RS14605	0.86	-2.1
3,199,770	-		LRK53_RS14605	0.86	-0.6
3,199,770	-		LRK53_RS14605	0.86	-0.5
3,199,770	-		LRK53_RS14605	0.86	-2.2
3,199,770	-		LRK53_RS14605	0.86	-0.6
3,199,770	-		LRK53_RS14605	0.86	-0.7
3,199,770	-		LRK53_RS14605	0.86	-1.2
3,199,770	-		LRK53_RS14605	0.86	-1.1
3,199,826	+				-0.9
3,199,826	+				-0.4
3,199,826	+				-1.1
3,199,826	+				-0.5
3,199,826	+				-2.9
3,199,826	+				-1.1
3,199,827	-				-0.6
3,199,827	-				-1.1
3,199,827	-				-0.3
3,199,827	-				-1.3
3,199,827	-				-1.2
3,199,827	-				-0.7
3,199,827	-				-0.1
3,199,827	-				-2.3
3,199,827	-				-0.1
3,199,827	-				-3.1
3,199,827	-				-2.0
3,199,827	-				+0.4
3,199,827	-				-0.3
3,199,832	+				-0.0
3,199,832	+				-1.4
3,199,859	+				-1.9
3,199,859	+				-0.2
3,199,859	+				-1.6
3,199,859	+				+0.2
3,199,859	+				-1.2
3,199,859	+				-0.5
3,199,859	+				-1.0
3,199,859	+				-2.5
3,199,859	+				+3.0
3,199,859	+				+0.7
3,199,859	+				-0.3
3,199,859	+				-2.3
3,199,859	+				+0.7
3,199,859	+				-1.9
3,199,860	-				-0.6
3,199,860	-				-1.6
3,199,860	-				-0.2
3,199,860	-				+0.5
3,199,860	-				-0.6