Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13915

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,064,219	+		LRK53_RS13910	0.20	+0.1
3,064,219	+		LRK53_RS13910	0.20	-0.0
3,064,219	+		LRK53_RS13910	0.20	-1.2
3,064,219	+		LRK53_RS13910	0.20	-1.8
3,064,219	+		LRK53_RS13910	0.20	+2.0
3,064,288	+		LRK53_RS13910	0.28	-3.2
3,064,288	+		LRK53_RS13910	0.28	+0.6
3,064,288	+		LRK53_RS13910	0.28	-1.3
3,064,288	+		LRK53_RS13910	0.28	+0.9
3,064,288	+		LRK53_RS13910	0.28	+0.8
3,064,288	+		LRK53_RS13910	0.28	-0.5
3,064,288	+		LRK53_RS13910	0.28	-0.6
3,064,289	-		LRK53_RS13910	0.28	-1.8
3,064,289	-		LRK53_RS13910	0.28	-3.5
3,064,310	+		LRK53_RS13910	0.30	-1.0
3,064,310	+		LRK53_RS13910	0.30	-1.1
3,064,310	+		LRK53_RS13910	0.30	-0.4
3,064,311	-		LRK53_RS13910	0.30	-0.5
3,064,311	-		LRK53_RS13910	0.30	-1.0
3,064,311	-		LRK53_RS13910	0.30	-0.8
3,064,311	-		LRK53_RS13910	0.30	+0.9
3,064,311	-		LRK53_RS13910	0.30	-1.5
3,064,591	+		LRK53_RS13910	0.62	-0.4
3,064,591	+		LRK53_RS13910	0.62	-0.3
3,064,591	+		LRK53_RS13910	0.62	-0.4
3,064,592	-		LRK53_RS13910	0.62	+0.5
3,064,592	-		LRK53_RS13910	0.62	-1.1
3,064,592	-		LRK53_RS13910	0.62	+1.4
3,064,592	-		LRK53_RS13910	0.62	+0.6
3,064,976	-				-1.1
3,064,976	-				+0.7
3,065,001	-				-0.1
3,065,001	-				-1.4
3,065,099	+		LRK53_RS13915	0.10	-0.0
3,065,099	+		LRK53_RS13915	0.10	+2.5
3,065,099	+		LRK53_RS13915	0.10	-0.5
3,065,099	+		LRK53_RS13915	0.10	+1.2
3,065,099	+		LRK53_RS13915	0.10	-0.0
3,065,099	+		LRK53_RS13915	0.10	-1.6
3,065,099	+		LRK53_RS13915	0.10	+0.8
3,065,099	+		LRK53_RS13915	0.10	-1.4
3,065,099	+		LRK53_RS13915	0.10	-1.9
3,065,099	+		LRK53_RS13915	0.10	-0.5
3,065,100	-		LRK53_RS13915	0.10	-1.5
3,065,100	-		LRK53_RS13915	0.10	+0.8
3,065,100	-		LRK53_RS13915	0.10	-0.4
3,065,100	-		LRK53_RS13915	0.10	-0.7
3,065,100	-		LRK53_RS13915	0.10	-0.6
3,065,186	+		LRK53_RS13915	0.19	+2.4
3,065,387	+		LRK53_RS13915	0.40	-0.1
3,065,387	+		LRK53_RS13915	0.40	+1.7
3,065,388	-		LRK53_RS13915	0.40	+0.5
3,065,447	+		LRK53_RS13915	0.46	-1.0
3,065,573	+		LRK53_RS13915	0.59	-0.5
3,065,573	+		LRK53_RS13915	0.59	-1.0
3,065,573	+		LRK53_RS13915	0.59	+0.8
3,065,574	-		LRK53_RS13915	0.59	-0.6
3,065,574	-		LRK53_RS13915	0.59	+0.4
3,065,950	+				-2.2
3,065,950	+				+0.2
3,065,950	+				-1.6
3,065,950	+				-0.9
3,065,951	-				-1.0
3,065,951	-				-2.5
3,065,951	-				-2.4
3,065,951	-				-1.5
3,065,951	-				+0.2
3,065,951	-				-0.2
3,066,052	+				-1.4
3,066,052	+				-0.4
3,066,072	+				+0.3
3,066,072	+				-1.8
3,066,072	+				-1.6
3,066,072	+				-0.2
3,066,072	+				-0.4
3,066,072	+				-0.2
3,066,072	+				-1.1
3,066,072	+				-0.4
3,066,072	+				+0.4
3,066,072	+				-0.7
3,066,072	+				-1.4
3,066,072	+				-0.5
3,066,072	+				-0.7
3,066,073	-				+3.0
3,066,073	-				-0.4
3,066,073	-				-0.8
3,066,073	-				+1.1
3,066,073	-				-0.9
3,066,073	-				-0.6
3,066,073	-				-1.4
3,066,073	-				-0.7
3,066,073	-				+0.7
3,066,073	-				-1.2
3,066,090	+				-0.2
3,066,090	+				-0.2
3,066,091	-				+0.0
3,066,222	+		LRK53_RS13920	0.24	-0.0
3,066,222	+		LRK53_RS13920	0.24	-0.9
3,066,222	+		LRK53_RS13920	0.24	-0.5
3,066,222	+		LRK53_RS13920	0.24	-0.4
3,066,222	+		LRK53_RS13920	0.24	-0.4
3,066,222	+		LRK53_RS13920	0.24	-1.3
3,066,222	+		LRK53_RS13920	0.24	-0.0
3,066,222	+		LRK53_RS13920	0.24	-0.0
3,066,223	-		LRK53_RS13920	0.24	+2.3
3,066,223	-		LRK53_RS13920	0.24	+1.3
3,066,223	-		LRK53_RS13920	0.24	-0.9
3,066,223	-		LRK53_RS13920	0.24	-0.9
3,066,223	-		LRK53_RS13920	0.24	-0.5
3,066,223	-		LRK53_RS13920	0.24	-2.2
3,066,223	-		LRK53_RS13920	0.24	+0.6
3,066,223	-		LRK53_RS13920	0.24	+1.0
3,066,223	-		LRK53_RS13920	0.24	-0.9
3,066,223	-		LRK53_RS13920	0.24	-2.5
3,066,223	-		LRK53_RS13920	0.24	-0.4
3,066,223	-		LRK53_RS13920	0.24	-0.4
3,066,223	-		LRK53_RS13920	0.24	-1.0
3,066,386	+		LRK53_RS13920	0.58	+0.9
3,066,386	+		LRK53_RS13920	0.58	+1.4
3,066,386	+		LRK53_RS13920	0.58	-0.8
3,066,386	+		LRK53_RS13920	0.58	+1.4
3,066,386	+		LRK53_RS13920	0.58	-0.2
3,066,387	-		LRK53_RS13920	0.58	-1.0
3,066,606	-				-1.2
3,066,730	+				-2.2
3,066,730	+				+0.1
3,066,730	+				-2.5
3,066,730	+				-0.2
3,066,730	+				+0.1
3,066,730	+				-0.8
3,066,731	-				+0.6
3,066,731	-				-1.4
3,066,731	-				-2.1
3,066,763	+				-1.2
3,066,763	+				-0.7
3,066,782	+				-0.4
3,066,782	+				-0.2
3,066,782	+				-0.7
3,066,782	+				-0.2
3,066,782	+				-1.1
3,066,782	+				-0.4
3,066,782	+				-2.2
3,066,782	+				-0.7
3,066,782	+				-0.3
3,066,881	+		LRK53_RS13925	0.15	+2.1
3,066,881	+		LRK53_RS13925	0.15	-1.1
3,066,881	+		LRK53_RS13925	0.15	-0.6
3,066,882	-		LRK53_RS13925	0.15	-1.3