Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11545

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,567,231	-		LRK53_RS11540	0.71	+0.0
2,567,231	-		LRK53_RS11540	0.71	-0.7
2,567,258	+		LRK53_RS11540	0.73	-0.7
2,567,258	+		LRK53_RS11540	0.73	-2.0
2,567,258	+		LRK53_RS11540	0.73	+1.3
2,567,258	+		LRK53_RS11540	0.73	+0.3
2,567,259	-		LRK53_RS11540	0.73	-1.2
2,567,259	-		LRK53_RS11540	0.73	-0.5
2,567,305	+		LRK53_RS11540	0.77	+0.1
2,567,305	+		LRK53_RS11540	0.77	+0.1
2,567,306	-		LRK53_RS11540	0.77	-0.1
2,567,306	-		LRK53_RS11540	0.77	-1.2
2,567,501	+				-0.1
2,567,501	+				-2.2
2,567,502	-				+0.0
2,567,502	-				+0.5
2,567,689	+				-1.7
2,567,689	+				+0.1
2,567,690	-				+1.6
2,567,690	-				+0.2
2,567,700	+				-1.8
2,567,700	+				-0.1
2,567,701	-				-0.1
2,567,701	-				+1.0
2,567,701	-				-0.7
2,567,701	-				-0.9
2,567,893	+				+0.1
2,567,893	+				-0.1
2,567,894	-				-2.3
2,567,894	-				-1.3
2,567,983	-				-1.2
2,567,991	+		LRK53_RS11545	0.11	-0.3
2,567,992	-		LRK53_RS11545	0.11	-1.2
2,568,078	+		LRK53_RS11545	0.21	+0.9
2,568,078	+		LRK53_RS11545	0.21	+0.1
2,568,078	+		LRK53_RS11545	0.21	-0.4
2,568,078	+		LRK53_RS11545	0.21	-1.1
2,568,078	+		LRK53_RS11545	0.21	-1.7
2,568,078	+		LRK53_RS11545	0.21	-1.3
2,568,078	+		LRK53_RS11545	0.21	+1.1
2,568,078	+		LRK53_RS11545	0.21	-0.9
2,568,078	+		LRK53_RS11545	0.21	-1.4
2,568,078	+		LRK53_RS11545	0.21	-2.2
2,568,078	+		LRK53_RS11545	0.21	-1.2
2,568,078	+		LRK53_RS11545	0.21	-0.0
2,568,078	+		LRK53_RS11545	0.21	+0.5
2,568,078	+		LRK53_RS11545	0.21	+0.5
2,568,078	+		LRK53_RS11545	0.21	+2.3
2,568,078	+		LRK53_RS11545	0.21	+2.6
2,568,078	+		LRK53_RS11545	0.21	+1.3
2,568,078	+		LRK53_RS11545	0.21	-1.0
2,568,078	+		LRK53_RS11545	0.21	+0.6
2,568,078	+		LRK53_RS11545	0.21	-2.4
2,568,079	-		LRK53_RS11545	0.21	-1.1
2,568,079	-		LRK53_RS11545	0.21	-0.6
2,568,079	-		LRK53_RS11545	0.21	-0.9
2,568,079	-		LRK53_RS11545	0.21	-1.1
2,568,079	-		LRK53_RS11545	0.21	-0.1
2,568,079	-		LRK53_RS11545	0.21	+0.5
2,568,079	-		LRK53_RS11545	0.21	-2.0
2,568,079	-		LRK53_RS11545	0.21	-1.8
2,568,079	-		LRK53_RS11545	0.21	+0.8
2,568,079	-		LRK53_RS11545	0.21	+2.5
2,568,079	-		LRK53_RS11545	0.21	-1.8
2,568,079	-		LRK53_RS11545	0.21	-1.4
2,568,079	-		LRK53_RS11545	0.21	+1.0
2,568,079	-		LRK53_RS11545	0.21	-0.7
2,568,079	-		LRK53_RS11545	0.21	-0.3
2,568,079	-		LRK53_RS11545	0.21	-0.5
2,568,357	+		LRK53_RS11545	0.55	-2.0
2,568,405	+		LRK53_RS11545	0.61	-1.3
2,568,405	+		LRK53_RS11545	0.61	-0.7
2,568,405	+		LRK53_RS11545	0.61	-0.7
2,568,406	-		LRK53_RS11545	0.61	-0.6
2,568,406	-		LRK53_RS11545	0.61	-2.0
2,568,417	+		LRK53_RS11545	0.62	+0.3
2,568,417	+		LRK53_RS11545	0.62	-2.1
2,568,417	+		LRK53_RS11545	0.62	-1.6
2,568,417	+		LRK53_RS11545	0.62	-2.8
2,568,417	+		LRK53_RS11545	0.62	-1.8
2,568,417	+		LRK53_RS11545	0.62	-0.4
2,568,417	+		LRK53_RS11545	0.62	-0.6
2,568,417	+		LRK53_RS11545	0.62	+1.5
2,568,417	+		LRK53_RS11545	0.62	+0.2
2,568,417	+		LRK53_RS11545	0.62	-0.4
2,568,417	+		LRK53_RS11545	0.62	+1.0
2,568,417	+		LRK53_RS11545	0.62	-1.1
2,568,417	+		LRK53_RS11545	0.62	+0.1
2,568,417	+		LRK53_RS11545	0.62	-3.1
2,568,417	+		LRK53_RS11545	0.62	-1.8
2,568,418	-		LRK53_RS11545	0.62	+1.1
2,568,418	-		LRK53_RS11545	0.62	+1.5
2,568,418	-		LRK53_RS11545	0.62	+0.4
2,568,418	-		LRK53_RS11545	0.62	-0.8
2,568,418	-		LRK53_RS11545	0.62	-0.8
2,568,418	-		LRK53_RS11545	0.62	-0.6
2,568,418	-		LRK53_RS11545	0.62	+0.6
2,568,418	-		LRK53_RS11545	0.62	-1.9
2,568,418	-		LRK53_RS11545	0.62	-1.1
2,568,418	-		LRK53_RS11545	0.62	-0.2
2,568,470	-		LRK53_RS11545	0.68	-0.9
2,568,513	+		LRK53_RS11545	0.74	+0.5
2,568,513	+		LRK53_RS11545	0.74	-1.2
2,568,513	+		LRK53_RS11545	0.74	+0.2
2,568,514	-		LRK53_RS11545	0.74	-0.9
2,568,514	-		LRK53_RS11545	0.74	-1.5
2,568,514	-		LRK53_RS11545	0.74	+0.1
2,568,514	-		LRK53_RS11545	0.74	+1.7
2,568,514	-		LRK53_RS11545	0.74	-0.2
2,568,525	+		LRK53_RS11545	0.75	+0.2
2,568,526	-		LRK53_RS11545	0.75	+1.2
2,569,007	+		LRK53_RS11550	0.22	-0.5
2,569,008	-		LRK53_RS11550	0.22	-3.5
2,569,008	-		LRK53_RS11550	0.22	-1.8
2,569,168	+		LRK53_RS11550	0.34	-0.3
2,569,169	-		LRK53_RS11550	0.34	-0.6
2,569,169	-		LRK53_RS11550	0.34	-0.1
2,569,310	+		LRK53_RS11550	0.46	+0.5
2,569,311	-		LRK53_RS11550	0.46	-0.4
2,569,325	+		LRK53_RS11550	0.47	-0.2
2,569,325	+		LRK53_RS11550	0.47	+1.5
2,569,325	+		LRK53_RS11550	0.47	-0.6
2,569,325	+		LRK53_RS11550	0.47	+1.3
2,569,325	+		LRK53_RS11550	0.47	-0.7
2,569,325	+		LRK53_RS11550	0.47	-0.1
2,569,325	+		LRK53_RS11550	0.47	+0.4
2,569,325	+		LRK53_RS11550	0.47	+0.9
2,569,575	+		LRK53_RS11550	0.67	-0.9
2,569,575	+		LRK53_RS11550	0.67	-1.8
2,569,575	+		LRK53_RS11550	0.67	-0.1
2,569,575	+		LRK53_RS11550	0.67	-0.3
2,569,575	+		LRK53_RS11550	0.67	-1.7
2,569,575	+		LRK53_RS11550	0.67	-1.1
2,569,575	+		LRK53_RS11550	0.67	-1.4
2,569,575	+		LRK53_RS11550	0.67	-0.1
2,569,575	+		LRK53_RS11550	0.67	-0.3
2,569,575	+		LRK53_RS11550	0.67	+0.1
2,569,575	+		LRK53_RS11550	0.67	-0.1
2,569,575	+		LRK53_RS11550	0.67	-0.8
2,569,575	+		LRK53_RS11550	0.67	-0.9
2,569,575	+		LRK53_RS11550	0.67	-0.7
2,569,575	+		LRK53_RS11550	0.67	-2.3
2,569,575	+		LRK53_RS11550	0.67	-0.9
2,569,576	-		LRK53_RS11550	0.67	-1.0
2,569,576	-		LRK53_RS11550	0.67	-0.6
2,569,576	-		LRK53_RS11550	0.67	-0.9
2,569,576	-		LRK53_RS11550	0.67	-0.4
2,569,576	-		LRK53_RS11550	0.67	-0.1
2,569,576	-		LRK53_RS11550	0.67	-0.9
2,569,576	-		LRK53_RS11550	0.67	-0.1
2,569,576	-		LRK53_RS11550	0.67	+1.7
2,569,576	-		LRK53_RS11550	0.67	-1.4
2,569,576	-		LRK53_RS11550	0.67	-0.3
2,569,627	+		LRK53_RS11550	0.71	+1.2