Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10065

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,249,264	-		LRK53_RS10055	0.34	-0.1
2,249,264	-		LRK53_RS10055	0.34	+0.5
2,249,264	-		LRK53_RS10055	0.34	-0.8
2,249,264	-		LRK53_RS10055	0.34	-1.7
2,249,264	-		LRK53_RS10055	0.34	+0.0
2,249,270	+		LRK53_RS10055	0.35	+0.6
2,249,270	+		LRK53_RS10055	0.35	+2.1
2,249,270	+		LRK53_RS10055	0.35	-1.8
2,249,270	+		LRK53_RS10055	0.35	-0.9
2,249,270	+		LRK53_RS10055	0.35	-1.2
2,249,270	+		LRK53_RS10055	0.35	+1.8
2,249,271	-		LRK53_RS10055	0.35	+1.0
2,249,271	-		LRK53_RS10055	0.35	+0.5
2,249,271	-		LRK53_RS10055	0.35	-1.7
2,249,271	-		LRK53_RS10055	0.35	-0.2
2,249,271	-		LRK53_RS10055	0.35	+1.2
2,249,386	+		LRK53_RS10055	0.57	-0.1
2,249,386	+		LRK53_RS10055	0.57	-0.4
2,249,386	+		LRK53_RS10055	0.57	+0.1
2,249,386	+		LRK53_RS10055	0.57	+0.5
2,249,386	+		LRK53_RS10055	0.57	-0.8
2,249,386	+		LRK53_RS10055	0.57	+0.0
2,249,386	+		LRK53_RS10055	0.57	-1.5
2,249,386	+		LRK53_RS10055	0.57	-0.4
2,249,386	+		LRK53_RS10055	0.57	-0.2
2,249,386	+		LRK53_RS10055	0.57	-2.2
2,249,386	+		LRK53_RS10055	0.57	-0.6
2,249,386	+		LRK53_RS10055	0.57	+0.3
2,249,386	+		LRK53_RS10055	0.57	-0.6
2,249,387	-		LRK53_RS10055	0.58	-0.9
2,249,387	-		LRK53_RS10055	0.58	-0.3
2,249,387	-		LRK53_RS10055	0.58	-1.5
2,249,387	-		LRK53_RS10055	0.58	-0.2
2,249,387	-		LRK53_RS10055	0.58	-1.0
2,249,387	-		LRK53_RS10055	0.58	+0.9
2,249,387	-		LRK53_RS10055	0.58	-0.4
2,249,387	-		LRK53_RS10055	0.58	-0.6
2,249,387	-		LRK53_RS10055	0.58	-1.8
2,249,387	-		LRK53_RS10055	0.58	+0.8
2,249,387	-		LRK53_RS10055	0.58	-1.5
2,249,387	-		LRK53_RS10055	0.58	+0.0
2,249,410	+		LRK53_RS10055	0.62	-1.4
2,249,538	+		LRK53_RS10055	0.87	+0.5
2,249,538	+		LRK53_RS10055	0.87	-0.0
2,249,539	-		LRK53_RS10055	0.87	+1.1
2,249,539	-		LRK53_RS10055	0.87	-0.4
2,249,587	-				+0.1
2,249,658	+				-0.9
2,249,659	-				-1.5
2,249,888	+		LRK53_RS10060	0.43	+0.3
2,249,888	+		LRK53_RS10060	0.43	+2.1
2,249,889	-		LRK53_RS10060	0.43	+0.4
2,249,889	-		LRK53_RS10060	0.43	-1.1
2,249,889	-		LRK53_RS10060	0.43	-0.9
2,250,029	+		LRK53_RS10060	0.66	+0.8
2,250,029	+		LRK53_RS10060	0.66	-0.3
2,250,029	+		LRK53_RS10060	0.66	-0.3
2,250,029	+		LRK53_RS10060	0.66	-0.8
2,250,029	+		LRK53_RS10060	0.66	-1.5
2,250,029	+		LRK53_RS10060	0.66	+0.2
2,250,030	-		LRK53_RS10060	0.66	+1.4
2,250,093	-		LRK53_RS10060	0.77	-0.3
2,250,128	+		LRK53_RS10060	0.83	-0.9
2,250,128	+		LRK53_RS10060	0.83	-0.4
2,250,128	+		LRK53_RS10060	0.83	-0.4
2,250,128	+		LRK53_RS10060	0.83	-1.1
2,250,128	+		LRK53_RS10060	0.83	-0.4
2,250,128	+		LRK53_RS10060	0.83	-1.0
2,250,129	-		LRK53_RS10060	0.83	-2.7
2,250,218	+				+0.0
2,250,218	+				+0.4
2,250,218	+				+0.0
2,250,218	+				-0.5
2,250,218	+				-0.9
2,250,219	-				-0.3
2,250,219	-				-1.4
2,250,219	-				-0.2
2,250,219	-				+0.7
2,250,219	-				+0.2
2,250,219	-				-3.2
2,250,219	-				-0.8
2,250,219	-				+0.9
2,250,219	-				-1.5
2,250,219	-				+0.1
2,250,219	-				-0.4
2,250,219	-				-0.6
2,250,219	-				-2.1
2,250,444	+				-0.7
2,250,444	+				-1.0
2,250,444	+				-0.2
2,250,444	+				+1.4
2,250,444	+				-0.5
2,250,444	+				-0.2
2,250,444	+				-0.5
2,250,444	+				+2.2
2,250,444	+				-0.2
2,250,444	+				-1.1
2,250,444	+				+0.2
2,250,444	+				+0.5
2,250,444	+				-1.0
2,250,444	+				-0.3
2,250,444	+				+0.0
2,250,444	+				+0.2
2,250,444	+				-0.3
2,250,444	+				-1.2
2,250,444	+				-0.4
2,250,444	+				-1.6
2,250,444	+				+2.6
2,250,444	+				-1.4
2,250,444	+				+0.0
2,250,444	+				-1.9
2,250,444	+				-0.2
2,250,444	+				-1.2
2,250,444	+				-1.2
2,250,444	+				-0.5
2,250,444	+				+0.0
2,250,444	+				-0.2
2,250,444	+				-0.3
2,250,444	+				+0.4
2,250,444	+				-1.1
2,250,444	+				-0.2
2,250,444	+				-1.9
2,250,444	+				+1.1
2,250,444	+				-2.1
2,250,444	+				-0.8
2,250,444	+				-0.7
2,250,444	+				-1.3
2,250,444	+				-1.1
2,250,444	+				-0.2
2,250,445	-				-2.5
2,250,445	-				-0.0
2,250,445	-				-1.3
2,250,445	-				-0.7
2,250,445	-				-1.4
2,250,445	-				-1.8
2,250,445	-				-1.1
2,250,445	-				+0.7
2,250,445	-				+0.8
2,250,445	-				-0.2
2,250,445	-				-2.5
2,250,445	-				-2.0
2,250,445	-				+0.2
2,250,445	-				-1.0
2,250,445	-				-0.8
2,250,445	-				-0.2
2,250,445	-				-2.3
2,250,445	-				+0.9
2,250,445	-				-1.6
2,250,445	-				-0.6
2,250,445	-				-0.2
2,250,445	-				-1.4
2,250,445	-				-0.6
2,250,445	-				+0.6
2,250,445	-				-0.6
2,250,445	-				-1.0
2,250,445	-				+0.6
2,250,445	-				+1.7
2,250,445	-				+2.6
2,250,445	-				+0.5
2,250,527	+		LRK53_RS10065	0.13	-0.4
2,250,527	+		LRK53_RS10065	0.13	+1.2
2,250,527	+		LRK53_RS10065	0.13	+0.8
2,250,527	+		LRK53_RS10065	0.13	+1.5
2,250,527	+		LRK53_RS10065	0.13	-0.3
2,250,527	+		LRK53_RS10065	0.13	-0.6
2,250,527	+		LRK53_RS10065	0.13	+0.8
2,250,527	+		LRK53_RS10065	0.13	+0.8
2,250,527	+		LRK53_RS10065	0.13	-0.6
2,250,527	+		LRK53_RS10065	0.13	-1.1
2,250,527	+		LRK53_RS10065	0.13	-0.1
2,250,528	-		LRK53_RS10065	0.13	+0.6
2,250,528	-		LRK53_RS10065	0.13	-1.3
2,250,528	-		LRK53_RS10065	0.13	-1.8
2,250,528	-		LRK53_RS10065	0.13	-0.1
2,250,528	-		LRK53_RS10065	0.13	-1.0
2,250,672	+		LRK53_RS10065	0.19	-0.7
2,250,672	+		LRK53_RS10065	0.19	-0.4
2,250,672	+		LRK53_RS10065	0.19	-1.2
2,250,672	+		LRK53_RS10065	0.19	-1.4
2,250,672	+		LRK53_RS10065	0.19	-1.4
2,250,672	+		LRK53_RS10065	0.19	-2.3
2,250,672	+		LRK53_RS10065	0.19	-1.5
2,250,672	+		LRK53_RS10065	0.19	+0.2
2,250,672	+		LRK53_RS10065	0.19	+0.8
2,250,672	+		LRK53_RS10065	0.19	-0.9
2,250,673	-		LRK53_RS10065	0.19	-1.6
2,250,673	-		LRK53_RS10065	0.19	+0.4
2,250,673	-		LRK53_RS10065	0.19	+0.6
2,250,673	-		LRK53_RS10065	0.19	-1.1
2,250,673	-		LRK53_RS10065	0.19	-1.5
2,250,673	-		LRK53_RS10065	0.19	-0.1
2,250,673	-		LRK53_RS10065	0.19	+2.0
2,250,686	-		LRK53_RS10065	0.20	-2.5
2,250,752	-		LRK53_RS10065	0.23	-2.4
2,250,762	+		LRK53_RS10065	0.24	-0.1
2,250,763	-		LRK53_RS10065	0.24	+0.0
2,250,948	+		LRK53_RS10065	0.32	+0.8
2,250,948	+		LRK53_RS10065	0.32	+0.2
2,250,948	+		LRK53_RS10065	0.32	-1.4
2,250,949	-		LRK53_RS10065	0.32	+1.2
2,250,949	-		LRK53_RS10065	0.32	-0.9
2,250,949	-		LRK53_RS10065	0.32	-0.2
2,250,949	-		LRK53_RS10065	0.32	-2.9
2,250,991	+		LRK53_RS10065	0.34	-1.9
2,250,991	+		LRK53_RS10065	0.34	+0.5
2,250,992	-		LRK53_RS10065	0.34	-0.0
2,251,029	+		LRK53_RS10065	0.36	+1.1
2,251,029	+		LRK53_RS10065	0.36	-2.0
2,251,029	+		LRK53_RS10065	0.36	+2.2
2,251,029	+		LRK53_RS10065	0.36	-0.8
2,251,030	-		LRK53_RS10065	0.36	-2.7
2,251,030	-		LRK53_RS10065	0.36	+1.8
2,251,030	-		LRK53_RS10065	0.36	+1.5
2,251,030	-		LRK53_RS10065	0.36	+0.5
2,251,030	-		LRK53_RS10065	0.36	-2.0
2,251,058	+		LRK53_RS10065	0.37	-2.4
2,251,100	+		LRK53_RS10065	0.39	+0.8
2,251,434	+		LRK53_RS10065	0.55	+0.8
2,251,434	+		LRK53_RS10065	0.55	-0.8
2,251,434	+		LRK53_RS10065	0.55	-0.2
2,251,434	+		LRK53_RS10065	0.55	-2.0
2,251,434	+		LRK53_RS10065	0.55	+0.5
2,251,434	+		LRK53_RS10065	0.55	+0.3
2,251,435	-		LRK53_RS10065	0.55	+1.2
2,251,435	-		LRK53_RS10065	0.55	+0.5
2,251,435	-		LRK53_RS10065	0.55	-0.2
2,251,435	-		LRK53_RS10065	0.55	+0.2
2,251,435	-		LRK53_RS10065	0.55	+0.6
2,251,439	+		LRK53_RS10065	0.55	+0.5
2,251,439	+		LRK53_RS10065	0.55	+0.1
2,251,439	+		LRK53_RS10065	0.55	-0.2
2,251,439	+		LRK53_RS10065	0.55	-0.6
2,251,439	+		LRK53_RS10065	0.55	+0.3
2,251,439	+		LRK53_RS10065	0.55	-0.3
2,251,439	+		LRK53_RS10065	0.55	+2.0
2,251,439	+		LRK53_RS10065	0.55	+1.6
2,251,439	+		LRK53_RS10065	0.55	-1.1
2,251,439	+		LRK53_RS10065	0.55	+0.9
2,251,439	+		LRK53_RS10065	0.55	-1.8
2,251,439	+		LRK53_RS10065	0.55	-0.6
2,251,439	+		LRK53_RS10065	0.55	-1.6
2,251,440	-		LRK53_RS10065	0.55	-1.0
2,251,440	-		LRK53_RS10065	0.55	+2.5
2,251,440	-		LRK53_RS10065	0.55	-2.4
2,251,440	-		LRK53_RS10065	0.55	-0.8
2,251,440	-		LRK53_RS10065	0.55	-2.4
2,251,440	-		LRK53_RS10065	0.55	-2.6
2,251,440	-		LRK53_RS10065	0.55	-0.0
2,251,440	-		LRK53_RS10065	0.55	-1.7
2,251,440	-		LRK53_RS10065	0.55	-0.4
2,251,489	+		LRK53_RS10065	0.57	-0.2
2,251,489	+		LRK53_RS10065	0.57	+0.8
2,251,489	+		LRK53_RS10065	0.57	-0.9
2,251,489	+		LRK53_RS10065	0.57	+0.9
2,251,489	+		LRK53_RS10065	0.57	-1.9
2,251,490	-		LRK53_RS10065	0.58	+0.3
2,251,561	+		LRK53_RS10065	0.61	-1.0
2,251,561	+		LRK53_RS10065	0.61	+1.4
2,251,561	+		LRK53_RS10065	0.61	-0.5
2,251,561	+		LRK53_RS10065	0.61	+0.9
2,251,561	+		LRK53_RS10065	0.61	-0.2
2,251,561	+		LRK53_RS10065	0.61	+0.1
2,251,562	-		LRK53_RS10065	0.61	-0.3
2,251,562	-		LRK53_RS10065	0.61	-0.3
2,251,562	-		LRK53_RS10065	0.61	-0.7
2,251,562	-		LRK53_RS10065	0.61	-0.3
2,251,562	-		LRK53_RS10065	0.61	-2.1
2,251,603	+		LRK53_RS10065	0.63	-0.8
2,251,652	+		LRK53_RS10065	0.65	+0.0
2,251,695	+		LRK53_RS10065	0.67	+1.9
2,251,695	+		LRK53_RS10065	0.67	-0.6
2,251,695	+		LRK53_RS10065	0.67	-0.6
2,251,695	+		LRK53_RS10065	0.67	+0.5
2,251,857	+		LRK53_RS10065	0.75	-2.2
2,251,869	+		LRK53_RS10065	0.75	-0.2
2,251,869	+		LRK53_RS10065	0.75	-0.8
2,251,869	+		LRK53_RS10065	0.75	-0.6
2,251,869	+		LRK53_RS10065	0.75	+0.2
2,251,869	+		LRK53_RS10065	0.75	-1.2
2,251,869	+		LRK53_RS10065	0.75	+0.2
2,251,869	+		LRK53_RS10065	0.75	-0.2
2,251,869	+		LRK53_RS10065	0.75	-1.4
2,251,869	+		LRK53_RS10065	0.75	+0.6
2,251,869	+		LRK53_RS10065	0.75	+0.0
2,251,869	+		LRK53_RS10065	0.75	-0.2
2,251,869	+		LRK53_RS10065	0.75	+1.2
2,251,869	+		LRK53_RS10065	0.75	-1.2
2,251,869	+		LRK53_RS10065	0.75	+0.1
2,251,869	+		LRK53_RS10065	0.75	-1.8
2,251,869	+		LRK53_RS10065	0.75	-1.1
2,251,869	+		LRK53_RS10065	0.75	-2.0
2,251,869	+		LRK53_RS10065	0.75	+0.3
2,251,869	+		LRK53_RS10065	0.75	+0.6
2,251,869	+		LRK53_RS10065	0.75	-0.2
2,251,869	+		LRK53_RS10065	0.75	+0.2
2,251,869	+		LRK53_RS10065	0.75	-0.2
2,251,869	+		LRK53_RS10065	0.75	-1.2
2,251,869	+		LRK53_RS10065	0.75	-1.0
2,251,869	+		LRK53_RS10065	0.75	-1.1
2,251,869	+		LRK53_RS10065	0.75	-1.1
2,251,869	+		LRK53_RS10065	0.75	+0.7
2,251,869	+		LRK53_RS10065	0.75	+1.2
2,251,869	+		LRK53_RS10065	0.75	+1.5
2,251,869	+		LRK53_RS10065	0.75	-2.5
2,251,869	+		LRK53_RS10065	0.75	-0.4
2,251,869	+		LRK53_RS10065	0.75	-0.6
2,251,869	+		LRK53_RS10065	0.75	-1.6
2,251,870	-		LRK53_RS10065	0.75	-1.3
2,251,870	-		LRK53_RS10065	0.75	-0.4
2,251,870	-		LRK53_RS10065	0.75	-2.1
2,251,870	-		LRK53_RS10065	0.75	-2.4
2,251,870	-		LRK53_RS10065	0.75	-1.3
2,251,870	-		LRK53_RS10065	0.75	+0.3
2,251,870	-		LRK53_RS10065	0.75	-3.2
2,251,870	-		LRK53_RS10065	0.75	-1.2
2,251,870	-		LRK53_RS10065	0.75	-2.0
2,251,870	-		LRK53_RS10065	0.75	-0.5
2,251,870	-		LRK53_RS10065	0.75	-3.1
2,251,870	-		LRK53_RS10065	0.75	-1.5
2,251,870	-		LRK53_RS10065	0.75	+0.5
2,251,870	-		LRK53_RS10065	0.75	+0.6
2,251,870	-		LRK53_RS10065	0.75	-0.2
2,251,870	-		LRK53_RS10065	0.75	+0.5
2,251,870	-		LRK53_RS10065	0.75	+0.6
2,251,870	-		LRK53_RS10065	0.75	-1.1
2,251,870	-		LRK53_RS10065	0.75	-0.5
2,251,870	-		LRK53_RS10065	0.75	-1.1
2,251,870	-		LRK53_RS10065	0.75	-2.6
2,251,870	-		LRK53_RS10065	0.75	+0.2
2,251,870	-		LRK53_RS10065	0.75	-0.6
2,251,870	-		LRK53_RS10065	0.75	-1.0
2,251,870	-		LRK53_RS10065	0.75	-0.9
2,251,870	-		LRK53_RS10065	0.75	-1.6
2,251,870	-		LRK53_RS10065	0.75	+0.0
2,251,870	-		LRK53_RS10065	0.75	-3.2
2,251,870	-		LRK53_RS10065	0.75	-2.0
2,251,932	+		LRK53_RS10065	0.78	-2.6
2,251,932	+		LRK53_RS10065	0.78	-0.2
2,251,933	-		LRK53_RS10065	0.78	+0.3
2,251,933	-		LRK53_RS10065	0.78	-1.7
2,251,983	+		LRK53_RS10065	0.81	-0.4
2,251,983	+		LRK53_RS10065	0.81	+0.0
2,251,983	+		LRK53_RS10065	0.81	-0.5
2,252,313	+				-1.4
2,252,313	+				-1.6
2,252,313	+				-0.4
2,252,313	+				-1.3
2,252,313	+				-1.0
2,252,313	+				+0.6
2,252,314	-				+0.0
2,252,314	-				-1.4
2,252,314	-				+0.0
2,252,314	-				-0.9
2,252,314	-				-0.2
2,252,376	+				-0.9
2,252,490	+				-1.6
2,252,490	+				+0.8
2,252,490	+				+0.4
2,252,490	+				-1.1
2,252,490	+				-1.3
2,252,490	+				-1.0
2,252,491	-				-0.9
2,252,491	-				+0.2
2,252,491	-				-0.7
2,252,491	-				-1.1
2,252,491	-				+1.2
2,252,491	-				-1.0
2,252,804	+		LRK53_RS10070	0.23	+1.0
2,252,804	+		LRK53_RS10070	0.23	-1.5
2,252,804	+		LRK53_RS10070	0.23	-0.2
2,252,804	+		LRK53_RS10070	0.23	-0.2
2,252,804	+		LRK53_RS10070	0.23	-0.2
2,252,804	+		LRK53_RS10070	0.23	-0.9
2,252,804	+		LRK53_RS10070	0.23	-0.8
2,252,804	+		LRK53_RS10070	0.23	+0.3
2,252,804	+		LRK53_RS10070	0.23	-0.4
2,252,804	+		LRK53_RS10070	0.23	+0.8
2,252,804	+		LRK53_RS10070	0.23	-0.3
2,252,804	+		LRK53_RS10070	0.23	-0.8
2,252,804	+		LRK53_RS10070	0.23	-1.1
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2,252,805	-		LRK53_RS10070	0.24	-2.1
2,252,805	-		LRK53_RS10070	0.24	-1.2
2,252,805	-		LRK53_RS10070	0.24	-0.4
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2,252,994	+		LRK53_RS10070	0.43	+2.2
2,252,994	+		LRK53_RS10070	0.43	+0.7
2,252,994	+		LRK53_RS10070	0.43	-1.5
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2,252,994	+		LRK53_RS10070	0.43	+1.1
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2,252,994	+		LRK53_RS10070	0.43	-2.5
2,252,994	+		LRK53_RS10070	0.43	-1.6
2,252,995	-		LRK53_RS10070	0.43	-1.1
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2,252,995	-		LRK53_RS10070	0.43	-0.8
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2,252,995	-		LRK53_RS10070	0.43	-1.7
2,253,120	+		LRK53_RS10070	0.56	-1.3
2,253,120	+		LRK53_RS10070	0.56	+0.0
2,253,120	+		LRK53_RS10070	0.56	-1.5
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2,253,175	-		LRK53_RS10070	0.61	+1.0
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2,253,230	+		LRK53_RS10070	0.67	+1.8
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2,253,231	-		LRK53_RS10070	0.67	+0.4
2,253,231	-		LRK53_RS10070	0.67	+0.3
2,253,291	+		LRK53_RS10070	0.73	-0.2
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2,253,291	+		LRK53_RS10070	0.73	-0.6
2,253,291	+		LRK53_RS10070	0.73	-0.7
2,253,291	+		LRK53_RS10070	0.73	-2.4
2,253,291	+		LRK53_RS10070	0.73	-1.1
2,253,291	+		LRK53_RS10070	0.73	+1.2
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2,253,292	-		LRK53_RS10070	0.73	+0.2
2,253,292	-		LRK53_RS10070	0.73	+0.8
2,253,292	-		LRK53_RS10070	0.73	-1.5
2,253,292	-		LRK53_RS10070	0.73	+0.2
2,253,292	-		LRK53_RS10070	0.73	+1.6
2,253,292	-		LRK53_RS10070	0.73	+0.5
2,253,292	-		LRK53_RS10070	0.73	+0.0
2,253,292	-		LRK53_RS10070	0.73	+0.3