Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09620

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,162,233	+				-1.3
2,162,233	+				+0.5
2,162,234	-				-0.8
2,162,234	-				+1.5
2,162,234	-				-0.3
2,162,330	+				-1.0
2,162,330	+				-2.8
2,162,330	+				-1.3
2,162,330	+				-2.5
2,162,330	+				-1.8
2,162,330	+				+1.5
2,162,331	-				-0.1
2,162,332	+				-2.8
2,162,332	+				-0.1
2,162,332	+				-0.3
2,162,332	+				-1.7
2,162,332	+				+0.2
2,162,332	+				-1.3
2,162,332	+				-2.6
2,162,332	+				-1.2
2,162,332	+				-0.0
2,162,332	+				-1.0
2,162,332	+				-0.4
2,162,333	-				-1.9
2,162,333	-				-1.0
2,162,333	-				-1.3
2,162,333	-				-0.6
2,162,333	-				+0.3
2,162,333	-				-0.6
2,162,333	-				-2.2
2,162,333	-				-1.0
2,162,501	+		LRK53_RS09615	0.17	-0.6
2,162,501	+		LRK53_RS09615	0.17	-2.8
2,162,501	+		LRK53_RS09615	0.17	+0.1
2,162,501	+		LRK53_RS09615	0.17	-1.2
2,162,501	+		LRK53_RS09615	0.17	+1.3
2,162,501	+		LRK53_RS09615	0.17	-2.0
2,162,501	+		LRK53_RS09615	0.17	-1.6
2,162,501	+		LRK53_RS09615	0.17	-1.5
2,162,501	+		LRK53_RS09615	0.17	-0.3
2,162,502	-		LRK53_RS09615	0.17	-0.9
2,162,502	-		LRK53_RS09615	0.17	+2.3
2,162,502	-		LRK53_RS09615	0.17	-1.5
2,162,502	-		LRK53_RS09615	0.17	-0.5
2,162,684	+		LRK53_RS09615	0.62	+0.3
2,162,685	-		LRK53_RS09615	0.62	-1.3
2,162,732	-		LRK53_RS09615	0.74	-1.5
2,162,754	-		LRK53_RS09615	0.80	+0.5
2,162,783	+		LRK53_RS09615	0.87	-0.7
2,162,783	+		LRK53_RS09615	0.87	-3.4
2,162,783	+		LRK53_RS09615	0.87	-1.2
2,162,783	+		LRK53_RS09615	0.87	-2.8
2,162,783	+		LRK53_RS09615	0.87	-0.9
2,162,783	+		LRK53_RS09615	0.87	-1.5
2,162,784	-		LRK53_RS09615	0.87	-1.2
2,162,784	-		LRK53_RS09615	0.87	-1.1
2,162,784	-		LRK53_RS09615	0.87	-2.7
2,162,784	-		LRK53_RS09615	0.87	-1.9
2,162,784	-		LRK53_RS09615	0.87	-0.5
2,162,786	-		LRK53_RS09615	0.87	-1.2
2,162,789	+		LRK53_RS09615	0.88	+0.3
2,162,789	+		LRK53_RS09615	0.88	-1.1
2,162,789	+		LRK53_RS09615	0.88	+0.2
2,162,789	+		LRK53_RS09615	0.88	-1.8
2,162,790	-		LRK53_RS09615	0.88	-1.1
2,162,790	-		LRK53_RS09615	0.88	-2.6
2,162,790	-		LRK53_RS09615	0.88	-1.1
2,162,790	-		LRK53_RS09615	0.88	-0.6
2,162,835	-				-1.1
2,162,951	+				-2.6
2,162,951	+				-0.8
2,162,952	-				-1.3
2,162,952	-				-1.0
2,162,952	-				-0.6
2,162,960	+				-1.6
2,162,960	+				-0.7
2,162,960	+				-0.7
2,162,960	+				-0.9
2,162,960	+				-1.4
2,162,960	+				-0.7
2,162,960	+				-0.7
2,162,960	+				-2.2
2,162,961	-				-2.0
2,162,961	-				-0.6
2,162,961	-				-0.3
2,162,961	-				-0.5
2,162,961	-				-0.8
2,162,961	-				-0.8
2,162,961	-				+0.1
2,162,961	-				-1.5
2,163,055	-				+0.8
2,163,156	-		LRK53_RS09620	0.17	-0.8
2,163,156	-		LRK53_RS09620	0.17	-0.8
2,163,156	-		LRK53_RS09620	0.17	-1.5
2,163,156	-		LRK53_RS09620	0.17	-0.3
2,163,671	+		LRK53_RS09620	0.67	-1.9
2,163,671	+		LRK53_RS09620	0.67	-1.0
2,163,671	+		LRK53_RS09620	0.67	-1.7
2,163,671	+		LRK53_RS09620	0.67	-1.2
2,163,671	+		LRK53_RS09620	0.67	-0.3
2,163,671	+		LRK53_RS09620	0.67	+0.9
2,163,671	+		LRK53_RS09620	0.67	-1.1
2,163,813	+		LRK53_RS09620	0.80	-0.6
2,163,825	-		LRK53_RS09620	0.81	-1.4
2,163,825	-		LRK53_RS09620	0.81	-0.5
2,163,953	+				-1.2
2,163,953	+				+0.9
2,163,953	+				-1.0
2,163,953	+				-1.4
2,163,953	+				-0.2
2,164,013	+				-0.1
2,164,013	+				-0.9
2,164,013	+				+0.3
2,164,013	+				-0.9
2,164,014	-				+0.8
2,164,014	-				-3.2
2,164,146	+				-0.5
2,164,146	+				-0.5
2,164,146	+				-1.0
2,164,147	-				-0.3
2,164,147	-				+0.8
2,164,147	-				-1.4
2,164,228	+				-1.7
2,164,240	-				-1.0
2,164,240	-				-1.1
2,164,585	+		LRK53_RS09625	0.16	-0.4
2,164,585	+		LRK53_RS09625	0.16	-0.5
2,164,585	+		LRK53_RS09625	0.16	+1.8
2,164,586	-		LRK53_RS09625	0.16	-1.6
2,164,586	-		LRK53_RS09625	0.16	-1.0
2,164,586	-		LRK53_RS09625	0.16	-1.9
2,164,586	-		LRK53_RS09625	0.16	-1.1
2,164,684	+		LRK53_RS09625	0.20	+0.7
2,164,684	+		LRK53_RS09625	0.20	+2.1
2,164,685	-		LRK53_RS09625	0.20	-2.5
2,164,685	-		LRK53_RS09625	0.20	+0.3
2,164,685	-		LRK53_RS09625	0.20	-1.0
2,164,699	+		LRK53_RS09625	0.21	-1.7
2,164,699	+		LRK53_RS09625	0.21	-1.1
2,164,699	+		LRK53_RS09625	0.21	-0.1
2,164,700	-		LRK53_RS09625	0.21	-1.8
2,164,700	-		LRK53_RS09625	0.21	-1.9
2,164,700	-		LRK53_RS09625	0.21	+1.3
2,164,750	+		LRK53_RS09625	0.23	-1.2
2,164,786	+		LRK53_RS09625	0.25	+0.7
2,164,786	+		LRK53_RS09625	0.25	-2.3
2,164,786	+		LRK53_RS09625	0.25	-3.1
2,164,786	+		LRK53_RS09625	0.25	-1.3
2,164,786	+		LRK53_RS09625	0.25	-0.2
2,164,786	+		LRK53_RS09625	0.25	-0.7
2,164,786	+		LRK53_RS09625	0.25	-0.0
2,164,786	+		LRK53_RS09625	0.25	-1.0
2,164,787	-		LRK53_RS09625	0.25	-0.8
2,164,787	-		LRK53_RS09625	0.25	-0.1
2,164,787	-		LRK53_RS09625	0.25	+0.6
2,164,787	-		LRK53_RS09625	0.25	+0.1
2,164,787	-		LRK53_RS09625	0.25	-0.8
2,164,787	-		LRK53_RS09625	0.25	+1.1
2,164,787	-		LRK53_RS09625	0.25	+2.0
2,164,787	-		LRK53_RS09625	0.25	-0.5
2,164,853	+		LRK53_RS09625	0.27	-0.9
2,164,853	+		LRK53_RS09625	0.27	-0.6
2,164,927	+		LRK53_RS09625	0.31	+0.1
2,164,927	+		LRK53_RS09625	0.31	-0.1
2,164,927	+		LRK53_RS09625	0.31	-1.1
2,164,928	-		LRK53_RS09625	0.31	-1.6
2,164,928	-		LRK53_RS09625	0.31	-1.5
2,164,928	-		LRK53_RS09625	0.31	-1.1
2,164,928	-		LRK53_RS09625	0.31	-0.8
2,164,928	-		LRK53_RS09625	0.31	+0.3
2,164,928	-		LRK53_RS09625	0.31	+2.1
2,164,929	+		LRK53_RS09625	0.31	-0.1
2,164,929	+		LRK53_RS09625	0.31	-0.6
2,164,929	+		LRK53_RS09625	0.31	-0.0
2,164,929	+		LRK53_RS09625	0.31	-1.0
2,164,930	-		LRK53_RS09625	0.31	-0.5
2,164,930	-		LRK53_RS09625	0.31	+1.6
2,164,930	-		LRK53_RS09625	0.31	-0.4
2,164,930	-		LRK53_RS09625	0.31	-1.3
2,164,930	-		LRK53_RS09625	0.31	-0.8
2,164,930	-		LRK53_RS09625	0.31	-1.8
2,164,930	-		LRK53_RS09625	0.31	-2.4
2,164,930	-		LRK53_RS09625	0.31	-0.5
2,164,970	-		LRK53_RS09625	0.32	-1.5