Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09415

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,111,965	+		LRK53_RS09410	0.48	-2.3
2,111,965	+		LRK53_RS09410	0.48	-0.1
2,111,965	+		LRK53_RS09410	0.48	-1.1
2,111,965	+		LRK53_RS09410	0.48	-1.0
2,111,965	+		LRK53_RS09410	0.48	+0.4
2,111,965	+		LRK53_RS09410	0.48	+0.5
2,111,965	+		LRK53_RS09410	0.48	-2.7
2,111,966	-		LRK53_RS09410	0.48	-2.7
2,111,966	-		LRK53_RS09410	0.48	-1.4
2,111,966	-		LRK53_RS09410	0.48	-0.4
2,111,966	-		LRK53_RS09410	0.48	-1.1
2,111,971	+		LRK53_RS09410	0.48	-2.0
2,111,972	-		LRK53_RS09410	0.49	-1.6
2,111,972	-		LRK53_RS09410	0.49	-0.3
2,111,972	-		LRK53_RS09410	0.49	+0.7
2,112,157	+		LRK53_RS09410	0.59	-1.9
2,112,157	+		LRK53_RS09410	0.59	-1.7
2,112,157	+		LRK53_RS09410	0.59	-0.7
2,112,158	-		LRK53_RS09410	0.59	-0.7
2,112,158	-		LRK53_RS09410	0.59	-1.3
2,112,158	-		LRK53_RS09410	0.59	+0.9
2,112,158	-		LRK53_RS09410	0.59	-0.8
2,112,158	-		LRK53_RS09410	0.59	-1.2
2,112,247	+		LRK53_RS09410	0.64	-0.5
2,112,248	-		LRK53_RS09410	0.64	+0.0
2,112,248	-		LRK53_RS09410	0.64	+0.3
2,112,248	-		LRK53_RS09410	0.64	+2.1
2,112,259	+		LRK53_RS09410	0.65	+0.4
2,112,259	+		LRK53_RS09410	0.65	-0.6
2,112,616	+		LRK53_RS09410	0.85	+1.1
2,112,616	+		LRK53_RS09410	0.85	+0.7
2,112,616	+		LRK53_RS09410	0.85	-2.4
2,112,616	+		LRK53_RS09410	0.85	-0.9
2,112,616	+		LRK53_RS09410	0.85	+1.3
2,112,616	+		LRK53_RS09410	0.85	+0.4
2,112,616	+		LRK53_RS09410	0.85	-0.1
2,112,616	+		LRK53_RS09410	0.85	-1.6
2,112,616	+		LRK53_RS09410	0.85	-0.4
2,112,616	+		LRK53_RS09410	0.85	-1.6
2,112,617	-		LRK53_RS09410	0.85	-0.4
2,112,617	-		LRK53_RS09410	0.85	-2.6
2,112,617	-		LRK53_RS09410	0.85	-1.2
2,112,617	-		LRK53_RS09410	0.85	-0.8
2,112,617	-		LRK53_RS09410	0.85	-1.9
2,112,617	-		LRK53_RS09410	0.85	-0.9
2,112,617	-		LRK53_RS09410	0.85	-0.1
2,112,617	-		LRK53_RS09410	0.85	+0.4
2,112,655	+		LRK53_RS09410	0.88	-0.2
2,112,655	+		LRK53_RS09410	0.88	-1.4
2,112,655	+		LRK53_RS09410	0.88	+0.7
2,112,655	+		LRK53_RS09410	0.88	-0.2
2,112,655	+		LRK53_RS09410	0.88	-0.6
2,112,656	-		LRK53_RS09410	0.88	-1.4
2,112,656	-		LRK53_RS09410	0.88	+1.7
2,112,721	+				+1.3
2,112,721	+				+1.3
2,112,721	+				-0.5
2,112,721	+				-2.9
2,112,721	+				-0.1
2,112,721	+				-0.7
2,112,721	+				-0.2
2,112,721	+				+1.1
2,112,722	-				-0.9
2,112,722	-				-1.9
2,112,722	-				-1.8
2,112,722	-				-0.3
2,112,739	+				+0.3
2,112,772	+				-2.5
2,112,772	+				-0.6
2,112,773	-				+0.1
2,112,773	-				-1.3
2,112,773	-				+1.7
2,112,773	-				+1.0
2,112,778	+				-0.3
2,112,779	-				+0.8
2,112,779	-				-0.2
2,112,779	-				-1.8
2,112,867	-				-0.2
2,112,868	+				-3.6
2,112,868	+				-1.2
2,112,868	+				-0.9
2,112,868	+				-2.3
2,112,868	+				-0.3
2,112,868	+				-0.3
2,112,868	+				-2.6
2,112,868	+				-0.9
2,112,868	+				-1.9
2,112,868	+				-2.6
2,112,868	+				-0.2
2,112,868	+				-1.2
2,112,868	+				+2.6
2,112,868	+				-0.3
2,112,868	+				-0.6
2,112,868	+				+0.7
2,112,868	+				-1.5
2,112,868	+				+0.2
2,112,868	+				+0.7
2,112,868	+				-2.1
2,112,868	+				+1.0
2,112,868	+				-0.9
2,112,868	+				-1.6
2,112,868	+				-0.4
2,112,869	-				+0.7
2,112,869	-				-0.6
2,112,869	-				-1.3
2,112,869	-				-0.3
2,112,869	-				+1.9
2,112,869	-				-2.8
2,112,869	-				-1.8
2,112,869	-				-0.6
2,112,869	-				-0.0
2,112,869	-				-0.0
2,112,869	-				-1.2
2,112,869	-				-1.4
2,112,869	-				-0.8
2,112,869	-				-0.7
2,112,869	-				-1.5
2,112,869	-				-1.1
2,112,869	-				-1.2
2,112,869	-				-1.4
2,112,869	-				+0.2
2,112,869	-				+1.9
2,112,869	-				-2.6
2,112,869	-				+0.4
2,112,869	-				-0.1
2,112,869	-				-0.9
2,112,869	-				+0.5
2,112,869	-				+1.0
2,112,869	-				-1.6
2,112,869	-				-0.9
2,112,869	-				-0.5
2,112,869	-				+0.2
2,112,869	-				-2.2
2,112,872	+				+0.9
2,112,872	+				-2.0
2,112,872	+				-0.3
2,112,872	+				+0.1
2,112,872	+				-0.2
2,112,872	+				-1.1
2,112,872	+				+0.5
2,112,872	+				+0.1
2,112,872	+				+0.1
2,112,872	+				-1.8
2,112,872	+				+1.3
2,112,872	+				-0.6
2,112,872	+				-0.3
2,112,872	+				+0.9
2,112,872	+				-0.1
2,112,872	+				-0.3
2,112,872	+				-2.3
2,112,873	-				+0.1
2,112,873	-				-1.2
2,112,873	-				-0.5
2,112,873	-				+0.8
2,112,873	-				-1.3
2,112,873	-				-1.7
2,112,873	-				-0.6
2,112,873	-				+0.1
2,112,873	-				-0.4
2,112,873	-				+1.2
2,112,873	-				-0.8
2,112,873	-				-0.5
2,112,873	-				-0.7
2,112,873	-				-0.7
2,112,873	-				-3.1
2,112,873	-				-0.7
2,112,873	-				-0.6
2,113,059	-		LRK53_RS09415	0.22	-0.7
2,113,059	-		LRK53_RS09415	0.22	-0.6
2,113,061	+		LRK53_RS09415	0.22	-2.6
2,113,061	+		LRK53_RS09415	0.22	-1.8
2,113,061	+		LRK53_RS09415	0.22	-1.9
2,113,061	+		LRK53_RS09415	0.22	-0.5
2,113,061	+		LRK53_RS09415	0.22	-2.4
2,113,061	+		LRK53_RS09415	0.22	-0.7
2,113,062	-		LRK53_RS09415	0.23	-0.9
2,113,062	-		LRK53_RS09415	0.23	-2.2
2,113,062	-		LRK53_RS09415	0.23	+1.0
2,113,062	-		LRK53_RS09415	0.23	-2.1
2,113,062	-		LRK53_RS09415	0.23	-2.1
2,113,062	-		LRK53_RS09415	0.23	-0.3
2,113,149	-		LRK53_RS09415	0.40	-4.3
2,113,149	-		LRK53_RS09415	0.40	+0.1
2,113,149	-		LRK53_RS09415	0.40	-0.9
2,113,369	+		LRK53_RS09415	0.83	-2.1
2,113,369	+		LRK53_RS09415	0.83	-1.7
2,113,370	-		LRK53_RS09415	0.83	+0.1
2,113,570	+				+0.6
2,113,570	+				-0.9
2,113,570	+				-1.9
2,113,570	+				-0.6
2,113,571	-				-0.4
2,113,571	-				-0.7
2,113,571	-				-0.4
2,113,571	-				-1.8
2,113,571	-				+1.1
2,113,571	-				-1.5
2,113,674	+		LRK53_RS09420	0.13	+0.1
2,113,727	+		LRK53_RS09420	0.25	+0.6
2,113,728	-		LRK53_RS09420	0.25	-0.7
2,113,891	-		LRK53_RS09420	0.64	+0.6
2,114,007	+				-0.9
2,114,007	+				-0.8
2,114,007	+				-0.4
2,114,008	-				-0.5
2,114,111	+		LRK53_RS09425	0.11	-2.4
2,114,111	+		LRK53_RS09425	0.11	-0.4
2,114,111	+		LRK53_RS09425	0.11	-0.4
2,114,111	+		LRK53_RS09425	0.11	-1.8
2,114,111	+		LRK53_RS09425	0.11	+0.5
2,114,111	+		LRK53_RS09425	0.11	+0.8
2,114,112	-		LRK53_RS09425	0.11	+2.9
2,114,112	-		LRK53_RS09425	0.11	-1.8
2,114,112	-		LRK53_RS09425	0.11	+1.4
2,114,112	-		LRK53_RS09425	0.11	+1.1
2,114,177	+		LRK53_RS09425	0.37	-0.7
2,114,178	-		LRK53_RS09425	0.37	-1.8
2,114,178	-		LRK53_RS09425	0.37	-0.6
2,114,244	+		LRK53_RS09425	0.63	-1.4
2,114,244	+		LRK53_RS09425	0.63	+0.9
2,114,244	+		LRK53_RS09425	0.63	-0.7
2,114,245	-		LRK53_RS09425	0.64	-1.1
2,114,245	-		LRK53_RS09425	0.64	-0.2
2,114,245	-		LRK53_RS09425	0.64	-0.6
2,114,245	-		LRK53_RS09425	0.64	-1.7
2,114,321	-				-1.0
2,114,422	-				-0.9
2,114,422	-				-0.1