Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09255

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,069,076	-				+0.7
2,069,076	-				-0.4
2,069,076	-				-1.6
2,069,103	-				-1.7
2,069,117	+				-0.6
2,069,117	+				-0.3
2,069,118	-				+1.0
2,069,118	-				+0.6
2,069,118	-				+0.1
2,069,118	-				-0.7
2,069,118	-				-1.4
2,069,175	+				-0.3
2,069,175	+				+0.4
2,069,175	+				-1.3
2,069,175	+				-1.7
2,069,175	+				-0.3
2,069,175	+				-1.1
2,069,175	+				-1.5
2,069,176	-				-0.8
2,069,176	-				+2.9
2,069,176	-				+0.7
2,069,176	-				-0.4
2,069,176	-				-1.5
2,069,176	-				-0.0
2,069,176	-				-0.5
2,069,176	-				-0.3
2,069,176	-				-2.1
2,069,290	-		LRK53_RS09250	0.13	+0.2
2,069,296	+		LRK53_RS09250	0.14	-0.7
2,069,297	-		LRK53_RS09250	0.14	-0.5
2,069,881	+				-1.3
2,069,881	+				+0.9
2,069,881	+				+0.1
2,069,881	+				+1.3
2,069,882	-				-1.1
2,069,882	-				+0.0
2,069,882	-				+0.1
2,069,882	-				+0.8
2,069,882	-				-0.9
2,069,882	-				+0.9
2,069,882	-				+0.3
2,069,882	-				-0.7
2,069,882	-				+1.3
2,070,037	+		LRK53_RS09255	0.10	+0.4
2,070,037	+		LRK53_RS09255	0.10	-2.7
2,070,037	+		LRK53_RS09255	0.10	-1.9
2,070,037	+		LRK53_RS09255	0.10	+0.3
2,070,038	-		LRK53_RS09255	0.10	+1.0
2,070,038	-		LRK53_RS09255	0.10	+1.3
2,070,038	-		LRK53_RS09255	0.10	-0.3
2,070,038	-		LRK53_RS09255	0.10	-0.7
2,070,038	-		LRK53_RS09255	0.10	-0.2
2,070,038	-		LRK53_RS09255	0.10	-0.1
2,070,041	+		LRK53_RS09255	0.11	-1.2
2,070,041	+		LRK53_RS09255	0.11	-0.6
2,070,041	+		LRK53_RS09255	0.11	-2.1
2,070,041	+		LRK53_RS09255	0.11	-0.8
2,070,042	-		LRK53_RS09255	0.11	-2.2
2,070,042	-		LRK53_RS09255	0.11	-1.1
2,070,042	-		LRK53_RS09255	0.11	-0.9
2,070,042	-		LRK53_RS09255	0.11	+1.2
2,070,042	-		LRK53_RS09255	0.11	-0.6
2,070,042	-		LRK53_RS09255	0.11	-1.0
2,070,042	-		LRK53_RS09255	0.11	-2.3
2,070,154	-		LRK53_RS09255	0.22	-1.2
2,070,154	-		LRK53_RS09255	0.22	-0.3
2,070,154	-		LRK53_RS09255	0.22	-0.1
2,070,349	+		LRK53_RS09255	0.42	+0.1
2,070,349	+		LRK53_RS09255	0.42	-1.0
2,070,349	+		LRK53_RS09255	0.42	+0.3
2,070,349	+		LRK53_RS09255	0.42	-0.6
2,070,349	+		LRK53_RS09255	0.42	+0.4
2,070,349	+		LRK53_RS09255	0.42	+2.2
2,070,349	+		LRK53_RS09255	0.42	-1.3
2,070,349	+		LRK53_RS09255	0.42	+1.6
2,070,349	+		LRK53_RS09255	0.42	-0.7
2,070,350	-		LRK53_RS09255	0.42	-1.7
2,070,350	-		LRK53_RS09255	0.42	+1.0
2,070,350	-		LRK53_RS09255	0.42	+2.5
2,070,350	-		LRK53_RS09255	0.42	+1.3
2,070,350	-		LRK53_RS09255	0.42	+0.5
2,070,350	-		LRK53_RS09255	0.42	-0.6
2,070,350	-		LRK53_RS09255	0.42	+0.4
2,070,350	-		LRK53_RS09255	0.42	-0.4
2,070,366	+		LRK53_RS09255	0.44	+0.3
2,070,366	+		LRK53_RS09255	0.44	+0.3
2,070,367	-		LRK53_RS09255	0.44	+0.3
2,070,367	-		LRK53_RS09255	0.44	-1.2
2,070,610	+		LRK53_RS09255	0.68	-0.1
2,070,628	+		LRK53_RS09255	0.70	-2.4
2,070,628	+		LRK53_RS09255	0.70	+0.0
2,070,628	+		LRK53_RS09255	0.70	+1.2
2,070,629	-		LRK53_RS09255	0.70	+0.1
2,070,710	+		LRK53_RS09255	0.79	-1.6
2,070,711	-		LRK53_RS09255	0.79	-1.1
2,070,861	+				+0.6
2,070,862	-				-1.7
2,070,907	+				-1.8
2,070,907	+				+0.2
2,070,907	+				-0.1
2,070,907	+				+0.5
2,070,907	+				-2.6
2,070,907	+				+0.1
2,070,908	-				-1.4
2,070,908	-				+1.0
2,070,908	-				-0.9
2,070,908	-				-2.2
2,070,908	-				-0.4
2,070,924	+				+0.1
2,070,924	+				-0.9
2,070,924	+				-2.5
2,070,924	+				-1.8
2,070,924	+				-1.9
2,070,924	+				-0.7
2,070,924	+				+1.6
2,070,924	+				-0.6
2,070,924	+				-1.3
2,070,924	+				-1.3
2,070,925	-				-1.9
2,070,925	-				+0.3
2,070,925	-				-1.3
2,070,925	-				-0.1
2,070,925	-				+0.6
2,070,925	-				-0.7
2,070,925	-				-1.6
2,070,925	-				+0.7
2,070,925	-				-0.1
2,070,925	-				-2.5
2,071,040	+		LRK53_RS09260	0.14	-0.8
2,071,041	-		LRK53_RS09260	0.14	-1.4
2,071,248	+		LRK53_RS09260	0.39	+1.8
2,071,248	+		LRK53_RS09260	0.39	-1.1
2,071,248	+		LRK53_RS09260	0.39	-1.2
2,071,249	-		LRK53_RS09260	0.39	-1.7
2,071,249	-		LRK53_RS09260	0.39	-0.3
2,071,249	-		LRK53_RS09260	0.39	-1.0
2,071,249	-		LRK53_RS09260	0.39	+0.3
2,071,260	-		LRK53_RS09260	0.40	-0.6
2,071,260	-		LRK53_RS09260	0.40	-0.4
2,071,260	-		LRK53_RS09260	0.40	-0.3
2,071,260	-		LRK53_RS09260	0.40	-1.1
2,071,260	-		LRK53_RS09260	0.40	-1.0
2,071,260	-		LRK53_RS09260	0.40	-0.4
2,071,260	-		LRK53_RS09260	0.40	+0.5
2,071,260	-		LRK53_RS09260	0.40	-2.2
2,071,260	-		LRK53_RS09260	0.40	-1.5
2,071,269	+		LRK53_RS09260	0.41	-2.4
2,071,269	+		LRK53_RS09260	0.41	-0.5
2,071,270	-		LRK53_RS09260	0.41	+0.3
2,071,270	-		LRK53_RS09260	0.41	-0.7
2,071,270	-		LRK53_RS09260	0.41	-2.9
2,071,270	-		LRK53_RS09260	0.41	+0.3
2,071,734	+				-0.6
2,071,734	+				-0.9
2,071,734	+				-0.4
2,071,734	+				+0.2
2,071,734	+				-0.3
2,071,734	+				-1.8
2,071,735	-				-0.2
2,071,735	-				-1.2
2,071,735	-				-0.1
2,071,735	-				+0.1