Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09015

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,015,441	+				-1.2
2,015,441	+				-1.0
2,015,441	+				-1.7
2,015,441	+				-0.2
2,015,441	+				+0.1
2,015,441	+				-0.8
2,015,441	+				-1.5
2,015,441	+				+0.3
2,015,441	+				-1.2
2,015,441	+				-1.2
2,015,442	-				-0.1
2,015,442	-				+0.1
2,015,442	-				-0.8
2,015,442	-				-0.1
2,015,442	-				+0.6
2,015,442	-				-1.3
2,015,730	+		LRK53_RS09010	0.34	-0.1
2,015,730	+		LRK53_RS09010	0.34	-2.6
2,015,730	+		LRK53_RS09010	0.34	-1.3
2,015,730	+		LRK53_RS09010	0.34	-0.7
2,015,730	+		LRK53_RS09010	0.34	-0.1
2,015,730	+		LRK53_RS09010	0.34	-1.5
2,015,730	+		LRK53_RS09010	0.34	-1.2
2,015,731	-		LRK53_RS09010	0.34	-0.8
2,015,731	-		LRK53_RS09010	0.34	-0.4
2,015,731	-		LRK53_RS09010	0.34	-2.9
2,015,731	-		LRK53_RS09010	0.34	-1.6
2,015,731	-		LRK53_RS09010	0.34	-0.1
2,015,731	-		LRK53_RS09010	0.34	-1.2
2,015,731	-		LRK53_RS09010	0.34	-2.0
2,015,775	+		LRK53_RS09010	0.42	-1.0
2,015,776	-		LRK53_RS09010	0.43	+0.2
2,015,776	-		LRK53_RS09010	0.43	-2.2
2,015,792	-		LRK53_RS09010	0.46	-1.2
2,015,792	-		LRK53_RS09010	0.46	-0.8
2,015,808	-		LRK53_RS09010	0.49	-0.1
2,015,904	+		LRK53_RS09010	0.67	+0.1
2,015,904	+		LRK53_RS09010	0.67	+0.1
2,015,905	-		LRK53_RS09010	0.67	-0.7
2,015,910	+		LRK53_RS09010	0.68	-0.5
2,015,911	-		LRK53_RS09010	0.68	+0.5
2,016,101	+				-0.7
2,016,101	+				-1.8
2,016,101	+				+2.4
2,016,101	+				-0.4
2,016,101	+				-2.0
2,016,101	+				-0.8
2,016,101	+				-0.4
2,016,102	-				-0.7
2,016,102	-				-3.0
2,016,102	-				-0.7
2,016,102	-				-1.2
2,016,102	-				+1.1
2,016,138	+				-0.4
2,016,139	-				-0.9
2,016,139	-				-0.4
2,016,139	-				-1.6
2,016,152	+				+0.3
2,016,152	+				-0.7
2,016,153	-				-0.4
2,016,153	-				-1.2
2,016,153	-				-3.6
2,016,153	-				+0.3
2,016,281	+		LRK53_RS09015	0.45	-0.1
2,016,282	-		LRK53_RS09015	0.46	-0.0
2,016,418	+				-1.3
2,016,418	+				+0.0
2,016,418	+				+0.1
2,016,582	+		LRK53_RS09020	0.67	-1.1
2,016,582	+		LRK53_RS09020	0.67	-0.1
2,016,582	+		LRK53_RS09020	0.67	-0.5
2,016,582	+		LRK53_RS09020	0.67	+1.1
2,016,582	+		LRK53_RS09020	0.67	-1.3
2,016,582	+		LRK53_RS09020	0.67	-1.9
2,016,583	-		LRK53_RS09020	0.67	-0.9
2,016,583	-		LRK53_RS09020	0.67	-0.2
2,016,583	-		LRK53_RS09020	0.67	-2.0
2,016,583	-		LRK53_RS09020	0.67	-0.5
2,016,583	-		LRK53_RS09020	0.67	+1.3
2,016,623	+		LRK53_RS09020	0.88	-0.7
2,016,623	+		LRK53_RS09020	0.88	+1.2
2,016,624	-		LRK53_RS09020	0.88	+2.3
2,016,624	-		LRK53_RS09020	0.88	-0.5
2,016,624	-		LRK53_RS09020	0.88	-1.0
2,016,624	-		LRK53_RS09020	0.88	-1.0
2,016,624	-		LRK53_RS09020	0.88	-0.4
2,016,624	-		LRK53_RS09020	0.88	-1.5
2,016,672	+				-0.6
2,016,672	+				+0.5
2,016,673	-				-2.3
2,016,673	-				+0.5
2,016,677	+				-0.1
2,016,677	+				-0.3
2,016,677	+				-0.9
2,016,677	+				-0.5
2,016,677	+				+0.6
2,016,677	+				-1.4
2,016,677	+				+0.8
2,016,677	+				+0.1
2,016,677	+				-0.9
2,016,678	-				+1.0
2,016,678	-				-1.7
2,016,678	-				+0.5
2,016,678	-				+0.6
2,016,678	-				-1.5
2,016,678	-				+0.0
2,016,678	-				-0.1
2,016,678	-				-1.0
2,016,678	-				+1.8
2,016,678	-				-0.7
2,016,678	-				-2.2
2,016,678	-				-0.1
2,016,678	-				-0.6
2,016,678	-				-1.9
2,016,678	-				+1.8
2,016,678	-				-1.2
2,016,681	+				-1.3
2,016,681	+				-0.8
2,016,681	+				-1.0
2,016,681	+				-0.8
2,016,682	-				-0.2
2,016,682	-				-0.5
2,016,682	-				-0.5
2,016,682	-				-1.7
2,016,682	-				+0.1
2,016,682	-				-0.1
2,016,682	-				-1.5
2,016,682	-				-0.4
2,016,717	+				-1.2
2,016,717	+				-0.8
2,016,717	+				+0.7
2,016,717	+				-1.1
2,016,718	-				-0.5
2,016,718	-				-1.5
2,016,718	-				-1.3
2,016,759	+				-0.2
2,016,759	+				-1.0
2,016,759	+				-1.4
2,016,759	+				-1.4
2,016,759	+				-0.7
2,016,760	-				+2.1
2,016,760	-				+1.1
2,016,867	+				-1.9
2,016,868	-				-2.6
2,016,868	-				-1.1
2,016,868	-				-0.4
2,016,879	+				+1.1
2,016,879	+				-1.8
2,016,880	-				-0.1
2,016,880	-				-0.8
2,016,915	+				-1.5
2,016,915	+				-1.4
2,016,915	+				+0.7
2,016,915	+				+1.0
2,016,915	+				-0.1
2,016,915	+				+0.8
2,016,915	+				-0.9
2,016,915	+				-2.5
2,016,916	-				-0.9
2,016,916	-				+0.8
2,016,916	-				-2.0
2,016,916	-				+0.4
2,016,916	-				-0.2
2,016,916	-				-2.4
2,016,916	-				+0.2
2,016,916	-				-0.1
2,016,916	-				-0.1
2,016,916	-				-1.0
2,016,916	-				-1.2
2,016,916	-				+0.3
2,016,916	-				-0.2
2,016,916	-				-0.5
2,016,916	-				+0.9
2,016,916	-				-1.6
2,016,916	-				-1.1
2,016,916	-				-1.1
2,016,922	+				-0.4
2,016,922	+				-1.9
2,016,923	-				-1.6
2,016,923	-				-0.4
2,017,137	+				-0.8
2,017,137	+				-0.7
2,017,137	+				+0.2
2,017,137	+				-1.4
2,017,137	+				-0.4
2,017,137	+				+0.8
2,017,137	+				-0.1
2,017,137	+				-2.2
2,017,137	+				+0.3
2,017,137	+				-0.5
2,017,137	+				+0.5
2,017,137	+				-1.1
2,017,137	+				+0.6
2,017,138	-				+0.3
2,017,138	-				-1.8
2,017,138	-				-0.8
2,017,138	-				+1.3
2,017,138	-				-0.9
2,017,138	-				+0.1
2,017,138	-				+0.3
2,017,138	-				+0.1
2,017,138	-				-0.1
2,017,138	-				-1.6
2,017,138	-				-0.8
2,017,138	-				-1.6
2,017,183	+				-1.7
2,017,183	+				-0.9
2,017,256	+		LRK53_RS09025	0.11	-0.7
2,017,256	+		LRK53_RS09025	0.11	-2.2
2,017,256	+		LRK53_RS09025	0.11	-0.3
2,017,289	+		LRK53_RS09025	0.12	-0.8
2,017,289	+		LRK53_RS09025	0.12	-1.4
2,017,290	-		LRK53_RS09025	0.12	+1.8
2,017,290	-		LRK53_RS09025	0.12	-0.1
2,017,290	-		LRK53_RS09025	0.12	-2.9
2,017,290	-		LRK53_RS09025	0.12	-1.2
2,017,388	+		LRK53_RS09025	0.16	-0.5
2,017,388	+		LRK53_RS09025	0.16	-1.0
2,017,388	+		LRK53_RS09025	0.16	-2.2
2,017,388	+		LRK53_RS09025	0.16	-0.9
2,017,388	+		LRK53_RS09025	0.16	+0.1
2,017,388	+		LRK53_RS09025	0.16	+0.3
2,017,388	+		LRK53_RS09025	0.16	-2.5
2,017,388	+		LRK53_RS09025	0.16	-0.5
2,017,388	+		LRK53_RS09025	0.16	-1.6
2,017,389	-		LRK53_RS09025	0.16	-1.1
2,017,389	-		LRK53_RS09025	0.16	+0.6
2,017,389	-		LRK53_RS09025	0.16	-1.5
2,017,389	-		LRK53_RS09025	0.16	-0.4
2,017,389	-		LRK53_RS09025	0.16	-1.5
2,017,389	-		LRK53_RS09025	0.16	-0.2
2,017,389	-		LRK53_RS09025	0.16	-0.6
2,017,389	-		LRK53_RS09025	0.16	-0.6
2,017,389	-		LRK53_RS09025	0.16	+0.3
2,017,389	-		LRK53_RS09025	0.16	-0.8
2,017,389	-		LRK53_RS09025	0.16	-1.9
2,017,390	+		LRK53_RS09025	0.16	-1.7
2,017,390	+		LRK53_RS09025	0.16	+0.3
2,017,390	+		LRK53_RS09025	0.16	-0.9
2,017,390	+		LRK53_RS09025	0.16	-1.8
2,017,390	+		LRK53_RS09025	0.16	+0.0
2,017,391	-		LRK53_RS09025	0.16	-1.7
2,017,391	-		LRK53_RS09025	0.16	-1.5
2,017,391	-		LRK53_RS09025	0.16	-0.1
2,017,391	-		LRK53_RS09025	0.16	+0.1
2,017,391	-		LRK53_RS09025	0.16	-2.4
2,017,391	-		LRK53_RS09025	0.16	-1.4