Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08010

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,801,024	+		LRK53_RS08005	0.75	-2.4
1,801,024	+		LRK53_RS08005	0.75	-1.8
1,801,108	+		LRK53_RS08005	0.77	+0.3
1,801,109	-		LRK53_RS08005	0.77	-0.2
1,801,109	-		LRK53_RS08005	0.77	+0.1
1,801,109	-		LRK53_RS08005	0.77	-1.2
1,801,109	-		LRK53_RS08005	0.77	+1.8
1,801,109	-		LRK53_RS08005	0.77	-1.4
1,801,150	+		LRK53_RS08005	0.78	-1.9
1,801,150	+		LRK53_RS08005	0.78	-1.1
1,801,150	+		LRK53_RS08005	0.78	-0.1
1,801,150	+		LRK53_RS08005	0.78	-0.1
1,801,150	+		LRK53_RS08005	0.78	-0.2
1,801,150	+		LRK53_RS08005	0.78	-2.3
1,801,150	+		LRK53_RS08005	0.78	-0.7
1,801,150	+		LRK53_RS08005	0.78	-0.3
1,801,150	+		LRK53_RS08005	0.78	-0.8
1,801,151	-		LRK53_RS08005	0.78	-0.5
1,801,151	-		LRK53_RS08005	0.78	+0.6
1,801,151	-		LRK53_RS08005	0.78	-0.3
1,801,151	-		LRK53_RS08005	0.78	-1.0
1,801,151	-		LRK53_RS08005	0.78	+0.0
1,801,151	-		LRK53_RS08005	0.78	-1.7
1,801,151	-		LRK53_RS08005	0.78	-2.1
1,801,151	-		LRK53_RS08005	0.78	-0.5
1,801,151	-		LRK53_RS08005	0.78	-0.9
1,801,153	+		LRK53_RS08005	0.78	-0.8
1,801,153	+		LRK53_RS08005	0.78	-1.0
1,801,153	+		LRK53_RS08005	0.78	+0.1
1,801,153	+		LRK53_RS08005	0.78	-1.9
1,801,153	+		LRK53_RS08005	0.78	-1.5
1,801,154	-		LRK53_RS08005	0.78	-0.6
1,801,154	-		LRK53_RS08005	0.78	-0.5
1,801,195	+		LRK53_RS08005	0.79	+0.1
1,801,195	+		LRK53_RS08005	0.79	+0.4
1,801,196	-		LRK53_RS08005	0.79	-1.0
1,801,580	+				-2.4
1,801,580	+				-1.5
1,801,580	+				-0.4
1,801,580	+				-1.6
1,801,580	+				+1.5
1,801,580	+				-0.4
1,801,581	-				+0.0
1,801,581	-				-1.6
1,801,581	-				-0.5
1,801,581	-				-1.9
1,801,581	-				+0.8
1,801,581	-				-0.0
1,801,581	-				+0.6
1,801,581	-				-0.3
1,801,581	-				-2.5
1,801,581	-				+1.1
1,801,642	+				-0.2
1,801,642	+				-0.3
1,801,642	+				-2.9
1,801,642	+				-0.4
1,801,642	+				+0.1
1,801,643	-				+0.5
1,801,643	-				-1.0
1,801,643	-				-0.5
1,801,697	-				-0.2
1,801,934	+				-1.9
1,801,935	-				-2.1
1,801,935	-				-0.5
1,801,935	-				-0.3
1,801,935	-				+1.3
1,801,935	-				+0.4
1,801,947	+				-1.3
1,801,947	+				-0.6
1,801,947	+				-1.5
1,801,948	-				-0.6
1,801,948	-				-0.8
1,801,948	-				+0.2
1,801,994	+				+0.2
1,801,994	+				-1.6
1,801,994	+				-0.6
1,801,994	+				-0.5
1,801,994	+				-0.9
1,801,995	-				+1.1
1,801,995	-				-0.1
1,801,995	-				-1.0
1,801,995	-				-1.9
1,802,102	+		LRK53_RS08010	0.18	+0.3
1,802,102	+		LRK53_RS08010	0.18	-1.8
1,802,102	+		LRK53_RS08010	0.18	-1.4
1,802,102	+		LRK53_RS08010	0.18	+1.1
1,802,102	+		LRK53_RS08010	0.18	-1.5
1,802,102	+		LRK53_RS08010	0.18	-0.2
1,802,103	-		LRK53_RS08010	0.18	-1.2
1,802,103	-		LRK53_RS08010	0.18	-1.3
1,802,103	-		LRK53_RS08010	0.18	-1.1
1,802,103	-		LRK53_RS08010	0.18	-0.1
1,802,103	-		LRK53_RS08010	0.18	+0.5
1,802,103	-		LRK53_RS08010	0.18	-2.3
1,802,103	-		LRK53_RS08010	0.18	+0.6
1,802,157	+		LRK53_RS08010	0.27	-1.1
1,802,157	+		LRK53_RS08010	0.27	-1.1
1,802,157	+		LRK53_RS08010	0.27	+0.1
1,802,157	+		LRK53_RS08010	0.27	+1.2
1,802,157	+		LRK53_RS08010	0.27	-0.1
1,802,157	+		LRK53_RS08010	0.27	-1.0
1,802,157	+		LRK53_RS08010	0.27	-1.4
1,802,157	+		LRK53_RS08010	0.27	-1.4
1,802,158	-		LRK53_RS08010	0.27	-1.6
1,802,158	-		LRK53_RS08010	0.27	-0.5
1,802,158	-		LRK53_RS08010	0.27	+0.6
1,802,158	-		LRK53_RS08010	0.27	-0.6
1,802,158	-		LRK53_RS08010	0.27	+0.6
1,802,158	-		LRK53_RS08010	0.27	+0.7
1,802,158	-		LRK53_RS08010	0.27	-0.6
1,802,158	-		LRK53_RS08010	0.27	-0.2
1,802,158	-		LRK53_RS08010	0.27	-1.3
1,802,158	-		LRK53_RS08010	0.27	+0.6
1,802,240	+		LRK53_RS08010	0.41	-1.0
1,802,240	+		LRK53_RS08010	0.41	+1.5
1,802,240	+		LRK53_RS08010	0.41	+0.4
1,802,240	+		LRK53_RS08010	0.41	-0.5
1,802,240	+		LRK53_RS08010	0.41	-0.0
1,802,240	+		LRK53_RS08010	0.41	-0.6
1,802,240	+		LRK53_RS08010	0.41	+0.4
1,802,240	+		LRK53_RS08010	0.41	-1.8
1,802,240	+		LRK53_RS08010	0.41	-1.6
1,802,240	+		LRK53_RS08010	0.41	-1.8
1,802,240	+		LRK53_RS08010	0.41	+0.1
1,802,240	+		LRK53_RS08010	0.41	+0.5
1,802,240	+		LRK53_RS08010	0.41	+0.5
1,802,240	+		LRK53_RS08010	0.41	-0.6
1,802,240	+		LRK53_RS08010	0.41	-0.5
1,802,240	+		LRK53_RS08010	0.41	+0.2
1,802,240	+		LRK53_RS08010	0.41	-1.3
1,802,240	+		LRK53_RS08010	0.41	-1.0
1,802,240	+		LRK53_RS08010	0.41	-0.8
1,802,240	+		LRK53_RS08010	0.41	-2.3
1,802,240	+		LRK53_RS08010	0.41	-1.5
1,802,241	-		LRK53_RS08010	0.41	-2.0
1,802,241	-		LRK53_RS08010	0.41	-0.7
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	+0.4
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	-1.4
1,802,241	-		LRK53_RS08010	0.41	-3.4
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	-0.4
1,802,241	-		LRK53_RS08010	0.41	-2.3
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	+0.6
1,802,241	-		LRK53_RS08010	0.41	-0.7
1,802,241	-		LRK53_RS08010	0.41	+0.0
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	-0.5
1,802,241	-		LRK53_RS08010	0.41	-1.4
1,802,241	-		LRK53_RS08010	0.41	-2.5
1,802,241	-		LRK53_RS08010	0.41	+0.1
1,802,241	-		LRK53_RS08010	0.41	+0.2
1,802,241	-		LRK53_RS08010	0.41	-0.1
1,802,241	-		LRK53_RS08010	0.41	-1.7
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	+1.1
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	-1.8
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	+0.1
1,802,241	-		LRK53_RS08010	0.41	-1.5
1,802,241	-		LRK53_RS08010	0.41	-1.4
1,802,241	-		LRK53_RS08010	0.41	-1.9
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	-0.2
1,802,241	-		LRK53_RS08010	0.41	-3.1
1,802,241	-		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	-0.8
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	+0.4
1,802,241	-		LRK53_RS08010	0.41	-2.1
1,802,241	-		LRK53_RS08010	0.41	-0.9
1,802,244	+		LRK53_RS08010	0.41	-2.4
1,802,244	+		LRK53_RS08010	0.41	-1.7
1,802,244	+		LRK53_RS08010	0.41	-1.7
1,802,244	+		LRK53_RS08010	0.41	-1.7
1,802,244	+		LRK53_RS08010	0.41	-0.2
1,802,244	+		LRK53_RS08010	0.41	-1.9
1,802,244	+		LRK53_RS08010	0.41	-1.4
1,802,244	+		LRK53_RS08010	0.41	+1.9
1,802,244	+		LRK53_RS08010	0.41	+0.1
1,802,244	+		LRK53_RS08010	0.41	+0.2
1,802,244	+		LRK53_RS08010	0.41	+1.8
1,802,244	+		LRK53_RS08010	0.41	-1.4
1,802,244	+		LRK53_RS08010	0.41	+2.1
1,802,245	-		LRK53_RS08010	0.42	+0.4
1,802,245	-		LRK53_RS08010	0.42	-0.2
1,802,245	-		LRK53_RS08010	0.42	+0.1
1,802,245	-		LRK53_RS08010	0.42	-0.5
1,802,245	-		LRK53_RS08010	0.42	-0.1
1,802,245	-		LRK53_RS08010	0.42	-1.3
1,802,245	-		LRK53_RS08010	0.42	-0.1
1,802,245	-		LRK53_RS08010	0.42	-1.3
1,802,297	+		LRK53_RS08010	0.50	-0.1
1,802,297	+		LRK53_RS08010	0.50	-0.8
1,802,297	+		LRK53_RS08010	0.50	+0.2
1,802,297	+		LRK53_RS08010	0.50	+1.9
1,802,297	+		LRK53_RS08010	0.50	-0.4
1,802,297	+		LRK53_RS08010	0.50	-0.1
1,802,297	+		LRK53_RS08010	0.50	-1.2
1,802,297	+		LRK53_RS08010	0.50	-1.8
1,802,297	+		LRK53_RS08010	0.50	-2.6
1,802,297	+		LRK53_RS08010	0.50	-1.5
1,802,297	+		LRK53_RS08010	0.50	+0.9
1,802,297	+		LRK53_RS08010	0.50	-2.9
1,802,297	+		LRK53_RS08010	0.50	+1.8
1,802,298	-		LRK53_RS08010	0.50	-1.9
1,802,298	-		LRK53_RS08010	0.50	+0.4
1,802,298	-		LRK53_RS08010	0.50	-1.2
1,802,298	-		LRK53_RS08010	0.50	-1.1
1,802,298	-		LRK53_RS08010	0.50	-1.2
1,802,298	-		LRK53_RS08010	0.50	-1.6
1,802,298	-		LRK53_RS08010	0.50	-0.2
1,802,298	-		LRK53_RS08010	0.50	-1.3
1,802,298	-		LRK53_RS08010	0.50	-0.1
1,802,298	-		LRK53_RS08010	0.50	-0.5
1,802,298	-		LRK53_RS08010	0.50	-1.4
1,802,298	-		LRK53_RS08010	0.50	+0.4
1,802,298	-		LRK53_RS08010	0.50	-0.1
1,802,298	-		LRK53_RS08010	0.50	-1.1
1,802,298	-		LRK53_RS08010	0.50	-0.2
1,802,298	-		LRK53_RS08010	0.50	-1.8
1,802,298	-		LRK53_RS08010	0.50	-0.1
1,802,298	-		LRK53_RS08010	0.50	-0.5
1,802,298	-		LRK53_RS08010	0.50	+0.6
1,802,482	-		LRK53_RS08010	0.81	-0.6
1,802,610	-				-2.4
1,802,620	-				+0.4
1,802,698	-				-0.1
1,802,698	-				+0.2
1,802,698	-				+0.0
1,802,720	-				+0.1
1,802,729	+				-0.4
1,802,729	+				-0.1
1,802,877	+		LRK53_RS08015	0.20	-0.4
1,803,031	+		LRK53_RS08015	0.58	-0.9
1,803,031	+		LRK53_RS08015	0.58	-0.6
1,803,032	-		LRK53_RS08015	0.58	-1.0
1,803,032	-		LRK53_RS08015	0.58	-0.1
1,803,032	-		LRK53_RS08015	0.58	+0.2
1,803,115	+		LRK53_RS08015	0.79	-0.7
1,803,115	+		LRK53_RS08015	0.79	+0.6
1,803,116	-		LRK53_RS08015	0.79	-1.0
1,803,116	-		LRK53_RS08015	0.79	+1.1
1,803,116	-		LRK53_RS08015	0.79	-0.2
1,803,116	-		LRK53_RS08015	0.79	+0.4
1,803,116	-		LRK53_RS08015	0.79	+0.0
1,803,116	-		LRK53_RS08015	0.79	-0.1
1,803,117	+		LRK53_RS08015	0.80	-0.3
1,803,117	+		LRK53_RS08015	0.80	-0.4
1,803,117	+		LRK53_RS08015	0.80	-1.1
1,803,117	+		LRK53_RS08015	0.80	-0.6
1,803,117	+		LRK53_RS08015	0.80	+0.9
1,803,117	+		LRK53_RS08015	0.80	-1.7
1,803,117	+		LRK53_RS08015	0.80	-0.9
1,803,117	+		LRK53_RS08015	0.80	+0.0
1,803,118	-		LRK53_RS08015	0.80	-1.3
1,803,118	-		LRK53_RS08015	0.80	-0.5
1,803,118	-		LRK53_RS08015	0.80	-1.5
1,803,118	-		LRK53_RS08015	0.80	+0.9
1,803,237	+		LRK53_RS08020	0.11	+0.0
1,803,238	-		LRK53_RS08020	0.11	-0.2
1,803,238	-		LRK53_RS08020	0.11	-0.4
1,803,238	-		LRK53_RS08020	0.11	-1.4
1,803,258	+		LRK53_RS08020	0.16	+0.7
1,803,258	+		LRK53_RS08020	0.16	+0.0
1,803,258	+		LRK53_RS08020	0.16	-1.1
1,803,258	+		LRK53_RS08020	0.16	+0.4
1,803,258	+		LRK53_RS08020	0.16	-1.4
1,803,259	-		LRK53_RS08020	0.16	-1.3
1,803,259	-		LRK53_RS08020	0.16	-1.6
1,803,259	-		LRK53_RS08020	0.16	+0.9
1,803,259	-		LRK53_RS08020	0.16	+1.5
1,803,519	+		LRK53_RS08020	0.82	+0.0
1,803,519	+		LRK53_RS08020	0.82	-0.4
1,803,520	-		LRK53_RS08020	0.83	+1.0
1,803,520	-		LRK53_RS08020	0.83	+0.2
1,803,549	+				-1.1
1,803,549	+				-1.1
1,803,550	-				-0.7