Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07655

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,709,536	+				-0.9
1,709,536	+				-0.2
1,709,536	+				+1.4
1,709,536	+				-2.2
1,709,536	+				-0.3
1,709,537	-				+0.7
1,709,537	-				-1.9
1,709,537	-				+1.1
1,709,537	-				-0.5
1,709,537	-				-1.2
1,709,576	+				-1.3
1,709,704	+				-1.2
1,709,705	-				-2.7
1,709,705	-				-0.3
1,709,730	+				-2.1
1,709,730	+				-0.3
1,709,730	+				+0.5
1,709,730	+				-0.8
1,709,730	+				+1.0
1,709,730	+				+0.1
1,709,730	+				+1.2
1,709,730	+				-1.4
1,709,730	+				+0.0
1,709,730	+				-0.0
1,709,730	+				-1.1
1,709,731	-				+0.4
1,709,731	-				-2.1
1,709,731	-				+0.2
1,709,731	-				-1.0
1,709,731	-				-1.5
1,709,731	-				-0.9
1,709,731	-				-0.2
1,709,731	-				-0.2
1,709,731	-				+0.4
1,709,731	-				+1.0
1,709,731	-				+0.2
1,709,731	-				+0.9
1,709,731	-				+0.2
1,709,731	-				+0.7
1,709,731	-				+1.7
1,709,762	+				-0.6
1,709,762	+				-0.2
1,709,762	+				-0.8
1,709,762	+				-2.3
1,709,762	+				-1.4
1,709,762	+				-0.2
1,709,762	+				-0.3
1,709,762	+				-1.1
1,709,762	+				-1.6
1,709,762	+				-1.9
1,709,762	+				-1.5
1,709,763	-				-1.4
1,709,763	-				+0.3
1,709,763	-				-1.7
1,709,763	-				-0.6
1,709,763	-				-1.3
1,709,763	-				+1.0
1,709,763	-				+0.4
1,709,763	-				+1.3
1,709,866	+		LRK53_RS07650	0.25	-0.3
1,709,866	+		LRK53_RS07650	0.25	+0.0
1,709,866	+		LRK53_RS07650	0.25	-0.6
1,709,867	-		LRK53_RS07650	0.25	-0.3
1,709,921	-		LRK53_RS07650	0.37	+1.6
1,709,983	+		LRK53_RS07650	0.50	-1.6
1,709,992	+		LRK53_RS07650	0.52	+0.4
1,709,992	+		LRK53_RS07650	0.52	-1.8
1,709,992	+		LRK53_RS07650	0.52	+0.2
1,709,992	+		LRK53_RS07650	0.52	-3.1
1,709,993	-		LRK53_RS07650	0.52	-2.3
1,709,993	-		LRK53_RS07650	0.52	+0.2
1,709,993	-		LRK53_RS07650	0.52	-0.7
1,709,993	-		LRK53_RS07650	0.52	-0.6
1,709,993	-		LRK53_RS07650	0.52	-0.1
1,709,993	-		LRK53_RS07650	0.52	-2.1
1,710,031	+		LRK53_RS07650	0.61	-0.7
1,710,031	+		LRK53_RS07650	0.61	-0.1
1,710,031	+		LRK53_RS07650	0.61	-1.5
1,710,031	+		LRK53_RS07650	0.61	+2.2
1,710,031	+		LRK53_RS07650	0.61	+1.8
1,710,031	+		LRK53_RS07650	0.61	+0.9
1,710,031	+		LRK53_RS07650	0.61	+0.7
1,710,031	+		LRK53_RS07650	0.61	-0.6
1,710,032	-		LRK53_RS07650	0.61	-0.0
1,710,032	-		LRK53_RS07650	0.61	-0.3
1,710,032	-		LRK53_RS07650	0.61	-3.0
1,710,032	-		LRK53_RS07650	0.61	-1.4
1,710,032	-		LRK53_RS07650	0.61	+1.4
1,710,032	-		LRK53_RS07650	0.61	-2.0
1,710,032	-		LRK53_RS07650	0.61	-1.3
1,710,032	-		LRK53_RS07650	0.61	+0.4
1,710,032	-		LRK53_RS07650	0.61	-1.1
1,710,046	+		LRK53_RS07650	0.64	-1.1
1,710,046	+		LRK53_RS07650	0.64	+1.8
1,710,046	+		LRK53_RS07650	0.64	-2.2
1,710,061	+		LRK53_RS07650	0.67	-2.1
1,710,061	+		LRK53_RS07650	0.67	+2.3
1,710,061	+		LRK53_RS07650	0.67	+1.5
1,710,062	-		LRK53_RS07650	0.67	-0.1
1,710,062	-		LRK53_RS07650	0.67	-0.2
1,710,076	+		LRK53_RS07650	0.70	-0.6
1,710,076	+		LRK53_RS07650	0.70	-0.2
1,710,085	+		LRK53_RS07650	0.72	+0.7
1,710,085	+		LRK53_RS07650	0.72	-0.5
1,710,085	+		LRK53_RS07650	0.72	-0.2
1,710,085	+		LRK53_RS07650	0.72	+0.1
1,710,085	+		LRK53_RS07650	0.72	-1.2
1,710,085	+		LRK53_RS07650	0.72	+0.7
1,710,085	+		LRK53_RS07650	0.72	-0.5
1,710,085	+		LRK53_RS07650	0.72	-1.1
1,710,085	+		LRK53_RS07650	0.72	-0.7
1,710,086	-		LRK53_RS07650	0.72	-0.0
1,710,086	-		LRK53_RS07650	0.72	-1.6
1,710,086	-		LRK53_RS07650	0.72	-0.3
1,710,086	-		LRK53_RS07650	0.72	+0.2
1,710,086	-		LRK53_RS07650	0.72	-2.3
1,710,086	-		LRK53_RS07650	0.72	-0.7
1,710,086	-		LRK53_RS07650	0.72	-0.5
1,710,086	-		LRK53_RS07650	0.72	-2.1
1,710,086	-		LRK53_RS07650	0.72	+0.2
1,710,086	-		LRK53_RS07650	0.72	-0.2
1,710,086	-		LRK53_RS07650	0.72	-0.7
1,710,157	+		LRK53_RS07650	0.88	+0.1
1,710,157	+		LRK53_RS07650	0.88	-0.4
1,710,157	+		LRK53_RS07650	0.88	-1.1
1,710,157	+		LRK53_RS07650	0.88	-0.3
1,710,157	+		LRK53_RS07650	0.88	+0.3
1,710,157	+		LRK53_RS07650	0.88	+0.3
1,710,158	-		LRK53_RS07650	0.88	-0.3
1,710,158	-		LRK53_RS07650	0.88	+0.5
1,710,158	-		LRK53_RS07650	0.88	+1.8
1,710,158	-		LRK53_RS07650	0.88	+0.1
1,710,158	-		LRK53_RS07650	0.88	-1.0
1,710,158	-		LRK53_RS07650	0.88	+0.7
1,710,211	+				-0.5
1,710,211	+				+1.5
1,710,211	+				-0.3
1,710,212	-				-1.1
1,710,212	-				-0.5
1,710,212	-				+0.7
1,710,212	-				-1.1
1,710,212	-				-0.5
1,710,269	+				+0.3
1,710,287	+				+0.4
1,710,288	-				+0.3
1,710,288	-				-1.7
1,710,359	+				+1.0
1,710,359	+				-0.1
1,710,511	+		LRK53_RS07655	0.24	-0.3
1,710,511	+		LRK53_RS07655	0.24	-1.3
1,710,512	-		LRK53_RS07655	0.24	-0.3
1,710,512	-		LRK53_RS07655	0.24	-1.3
1,710,512	-		LRK53_RS07655	0.24	+0.9
1,710,512	-		LRK53_RS07655	0.24	-0.1
1,710,649	+		LRK53_RS07655	0.48	-1.1
1,710,649	+		LRK53_RS07655	0.48	-0.1
1,710,650	-		LRK53_RS07655	0.48	+0.7
1,710,650	-		LRK53_RS07655	0.48	+0.0
1,710,650	-		LRK53_RS07655	0.48	-1.5
1,710,650	-		LRK53_RS07655	0.48	-1.1
1,710,694	+		LRK53_RS07655	0.55	+0.2
1,710,694	+		LRK53_RS07655	0.55	+0.4
1,710,694	+		LRK53_RS07655	0.55	-1.7
1,710,694	+		LRK53_RS07655	0.55	+1.3
1,710,694	+		LRK53_RS07655	0.55	-0.9
1,710,694	+		LRK53_RS07655	0.55	-0.1
1,710,694	+		LRK53_RS07655	0.55	-1.9
1,710,695	-		LRK53_RS07655	0.56	-0.6
1,710,695	-		LRK53_RS07655	0.56	-2.0
1,710,695	-		LRK53_RS07655	0.56	+1.7
1,710,695	-		LRK53_RS07655	0.56	-1.3
1,710,695	-		LRK53_RS07655	0.56	+0.3
1,710,695	-		LRK53_RS07655	0.56	+1.8
1,710,695	-		LRK53_RS07655	0.56	-0.6
1,710,695	-		LRK53_RS07655	0.56	-0.0
1,710,695	-		LRK53_RS07655	0.56	-1.0
1,710,722	-		LRK53_RS07655	0.60	-1.3
1,710,751	+		LRK53_RS07655	0.65	-0.7
1,710,751	+		LRK53_RS07655	0.65	-0.3
1,710,751	+		LRK53_RS07655	0.65	-1.1
1,710,751	+		LRK53_RS07655	0.65	+0.9
1,710,751	+		LRK53_RS07655	0.65	-1.5
1,710,751	+		LRK53_RS07655	0.65	+0.2
1,710,752	-		LRK53_RS07655	0.65	-0.5
1,710,752	-		LRK53_RS07655	0.65	-1.8
1,710,752	-		LRK53_RS07655	0.65	-0.2
1,710,752	-		LRK53_RS07655	0.65	-0.3
1,710,752	-		LRK53_RS07655	0.65	-0.0
1,710,752	-		LRK53_RS07655	0.65	-0.7
1,710,757	+		LRK53_RS07655	0.66	-0.5
1,710,757	+		LRK53_RS07655	0.66	-1.7
1,710,757	+		LRK53_RS07655	0.66	-1.3
1,710,757	+		LRK53_RS07655	0.66	-2.0
1,710,757	+		LRK53_RS07655	0.66	-0.3
1,710,757	+		LRK53_RS07655	0.66	+0.6
1,710,757	+		LRK53_RS07655	0.66	-1.8
1,710,757	+		LRK53_RS07655	0.66	-0.7
1,710,758	-		LRK53_RS07655	0.66	+0.4
1,710,758	-		LRK53_RS07655	0.66	-1.5
1,710,758	-		LRK53_RS07655	0.66	-1.1
1,710,758	-		LRK53_RS07655	0.66	-2.3
1,710,758	-		LRK53_RS07655	0.66	+0.3
1,710,758	-		LRK53_RS07655	0.66	+0.4
1,710,758	-		LRK53_RS07655	0.66	-0.3
1,710,799	+		LRK53_RS07655	0.74	-0.7
1,710,799	+		LRK53_RS07655	0.74	+1.4
1,710,895	+				-0.7
1,710,895	+				-1.3
1,710,895	+				-0.3
1,710,895	+				-0.7
1,710,895	+				+1.3
1,710,895	+				-0.4
1,710,895	+				-0.2
1,710,895	+				-1.2
1,710,895	+				-0.0
1,710,895	+				-0.4
1,710,895	+				-1.3
1,710,895	+				+0.7
1,710,895	+				-0.2
1,710,896	-				-0.3
1,710,896	-				-1.2
1,710,896	-				-0.6
1,710,896	-				+0.5
1,710,896	-				-0.5
1,710,896	-				+1.0
1,710,896	-				-0.2
1,710,896	-				-0.0
1,710,896	-				-0.1
1,710,896	-				+0.1
1,710,896	-				-1.5
1,710,896	-				+2.2
1,711,001	-				-0.5
1,711,044	+		LRK53_RS07660	0.18	+1.5
1,711,044	+		LRK53_RS07660	0.18	+1.1
1,711,044	+		LRK53_RS07660	0.18	+1.0
1,711,045	-		LRK53_RS07660	0.18	-1.5
1,711,045	-		LRK53_RS07660	0.18	-0.8
1,711,045	-		LRK53_RS07660	0.18	-2.4
1,711,086	+		LRK53_RS07660	0.27	-0.2
1,711,086	+		LRK53_RS07660	0.27	+4.8
1,711,086	+		LRK53_RS07660	0.27	-0.2
1,711,086	+		LRK53_RS07660	0.27	-1.7
1,711,086	+		LRK53_RS07660	0.27	-1.3
1,711,087	-		LRK53_RS07660	0.27	+0.5
1,711,087	-		LRK53_RS07660	0.27	+0.2
1,711,087	-		LRK53_RS07660	0.27	-0.1
1,711,179	+		LRK53_RS07660	0.46	+1.0
1,711,179	+		LRK53_RS07660	0.46	-1.8
1,711,179	+		LRK53_RS07660	0.46	+0.9
1,711,179	+		LRK53_RS07660	0.46	+0.3
1,711,179	+		LRK53_RS07660	0.46	-0.8
1,711,179	+		LRK53_RS07660	0.46	-0.0
1,711,179	+		LRK53_RS07660	0.46	-0.8
1,711,179	+		LRK53_RS07660	0.46	-0.1
1,711,180	-		LRK53_RS07660	0.46	-0.3
1,711,180	-		LRK53_RS07660	0.46	-1.2
1,711,180	-		LRK53_RS07660	0.46	+0.7
1,711,180	-		LRK53_RS07660	0.46	-0.6
1,711,180	-		LRK53_RS07660	0.46	-0.9
1,711,180	-		LRK53_RS07660	0.46	-0.8
1,711,180	-		LRK53_RS07660	0.46	-1.8
1,711,180	-		LRK53_RS07660	0.46	+0.5
1,711,180	-		LRK53_RS07660	0.46	-0.6
1,711,275	+		LRK53_RS07660	0.65	-0.5
1,711,275	+		LRK53_RS07660	0.65	-0.6
1,711,275	+		LRK53_RS07660	0.65	-0.3
1,711,275	+		LRK53_RS07660	0.65	-2.1
1,711,275	+		LRK53_RS07660	0.65	-0.1
1,711,275	+		LRK53_RS07660	0.65	-0.8
1,711,275	+		LRK53_RS07660	0.65	+0.2
1,711,275	+		LRK53_RS07660	0.65	+0.1
1,711,275	+		LRK53_RS07660	0.65	-0.3
1,711,275	+		LRK53_RS07660	0.65	-3.2
1,711,275	+		LRK53_RS07660	0.65	+1.8
1,711,275	+		LRK53_RS07660	0.65	-0.8
1,711,276	-		LRK53_RS07660	0.65	-0.3
1,711,276	-		LRK53_RS07660	0.65	+0.4
1,711,276	-		LRK53_RS07660	0.65	-1.4
1,711,276	-		LRK53_RS07660	0.65	-0.0
1,711,296	+		LRK53_RS07660	0.70	-0.3
1,711,296	+		LRK53_RS07660	0.70	-2.8
1,711,296	+		LRK53_RS07660	0.70	+0.2
1,711,297	-		LRK53_RS07660	0.70	+0.5
1,711,431	+				-0.2
1,711,432	-				+0.6
1,711,432	-				-1.4
1,711,432	-				-0.4
1,711,432	-				-3.1
1,711,475	+				-0.5
1,711,475	+				-0.8
1,711,475	+				-0.5
1,711,475	+				+1.7
1,711,475	+				-2.0
1,711,475	+				-0.3
1,711,475	+				+1.2
1,711,476	-				+0.2
1,711,476	-				-0.7
1,711,476	-				+0.4
1,711,476	-				-1.3
1,711,476	-				-0.7
1,711,476	-				-0.9
1,711,476	-				+0.4
1,711,522	+				-0.9
1,711,522	+				-0.6
1,711,522	+				-0.0
1,711,522	+				+0.8
1,711,523	-				+0.4
1,711,523	-				-0.7
1,711,532	+				-1.6
1,711,532	+				+0.4
1,711,532	+				-0.6
1,711,532	+				-1.0
1,711,532	+				-0.5
1,711,636	+		LRK53_RS07665	0.19	-0.9
1,711,636	+		LRK53_RS07665	0.19	-0.2
1,711,637	-		LRK53_RS07665	0.19	+0.2
1,711,637	-		LRK53_RS07665	0.19	+0.4
1,711,637	-		LRK53_RS07665	0.19	-1.4
1,711,723	+		LRK53_RS07665	0.33	-0.4