Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05175

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,214,074	-		LRK53_RS05165	0.84	-0.5
1,214,074	-		LRK53_RS05165	0.84	+1.6
1,214,074	-		LRK53_RS05165	0.84	-0.1
1,214,140	-				+0.4
1,214,222	+				-2.4
1,214,222	+				-1.7
1,214,222	+				-2.3
1,214,222	+				-1.7
1,214,223	-				+1.5
1,214,223	-				-0.6
1,214,223	-				+1.2
1,214,223	-				+0.3
1,214,223	-				-0.8
1,214,400	+		LRK53_RS05170	0.26	+0.8
1,214,400	+		LRK53_RS05170	0.26	+0.3
1,214,400	+		LRK53_RS05170	0.26	-1.1
1,214,400	+		LRK53_RS05170	0.26	-0.6
1,214,401	-		LRK53_RS05170	0.26	-0.7
1,214,401	-		LRK53_RS05170	0.26	+0.7
1,214,401	-		LRK53_RS05170	0.26	+1.9
1,214,731	-		LRK53_RS05170	0.73	-0.7
1,214,762	+		LRK53_RS05170	0.78	-0.5
1,214,913	+				+0.1
1,214,914	-				+0.7
1,214,995	+				-1.8
1,214,995	+				-1.7
1,214,995	+				-2.5
1,214,996	-				-0.3
1,214,996	-				+1.2
1,214,996	-				-1.3
1,215,185	-		LRK53_RS05175	0.17	-0.6
1,215,358	+		LRK53_RS05175	0.42	-1.2
1,215,358	+		LRK53_RS05175	0.42	-0.3
1,215,358	+		LRK53_RS05175	0.42	-0.1
1,215,358	+		LRK53_RS05175	0.42	+0.3
1,215,359	-		LRK53_RS05175	0.43	-0.8
1,215,359	-		LRK53_RS05175	0.43	-1.6
1,215,746	-				-2.0
1,215,746	-				-0.4
1,215,776	+				+0.6
1,215,776	+				-0.8
1,215,776	+				+0.6
1,215,776	+				-0.0
1,215,776	+				+2.9
1,215,776	+				+1.8
1,216,092	+				-0.4
1,216,092	+				-2.2
1,216,092	+				-1.4
1,216,093	-				-0.8
1,216,116	+				+0.1
1,216,116	+				+0.9
1,216,116	+				+0.9
1,216,116	+				+0.7
1,216,116	+				-0.7
1,216,116	+				-0.3
1,216,116	+				-0.1
1,216,117	-				-0.7
1,216,117	-				-1.4
1,216,117	-				-2.5
1,216,117	-				+0.3
1,216,117	-				-1.6
1,216,117	-				-1.2
1,216,117	-				-1.5
1,216,117	-				-0.9
1,216,117	-				-0.3
1,216,120	+				-1.0
1,216,120	+				-1.3
1,216,120	+				-0.3
1,216,120	+				+0.6
1,216,120	+				-1.6
1,216,120	+				-0.3
1,216,120	+				+2.9
1,216,120	+				+0.6
1,216,120	+				-0.1
1,216,120	+				-2.1
1,216,120	+				-0.6
1,216,120	+				-0.2
1,216,121	-				-2.3
1,216,121	-				-0.2
1,216,121	-				+0.6
1,216,121	-				-1.6
1,216,121	-				-1.5
1,216,121	-				+0.8
1,216,121	-				-0.6
1,216,121	-				-0.3
1,216,121	-				-0.4
1,216,233	+				+1.1
1,216,233	+				+0.4
1,216,234	-				-0.7
1,216,234	-				-0.7
1,216,234	-				+0.5
1,216,234	-				-1.6
1,216,234	-				-0.4
1,216,311	+				-0.8
1,216,311	+				-0.9
1,216,311	+				-3.0
1,216,311	+				-1.2
1,216,311	+				+1.3
1,216,311	+				+0.1
1,216,311	+				+0.3
1,216,312	-				-1.7
1,216,312	-				+0.1
1,216,312	-				-2.1
1,216,312	-				+0.8
1,216,312	-				-0.3
1,216,312	-				-0.6
1,216,313	-				+1.4
1,216,357	-				-0.6
1,216,434	+		LRK53_RS05185	0.10	-1.3
1,216,434	+		LRK53_RS05185	0.10	+1.1
1,216,434	+		LRK53_RS05185	0.10	-0.7
1,216,434	+		LRK53_RS05185	0.10	-1.8
1,216,434	+		LRK53_RS05185	0.10	-0.7
1,216,434	+		LRK53_RS05185	0.10	-2.4
1,216,434	+		LRK53_RS05185	0.10	-1.2
1,216,434	+		LRK53_RS05185	0.10	-1.5
1,216,435	+		LRK53_RS05185	0.10	-0.1
1,216,435	-		LRK53_RS05185	0.10	+0.3
1,216,435	-		LRK53_RS05185	0.10	-2.8
1,216,435	-		LRK53_RS05185	0.10	+1.9
1,216,435	-		LRK53_RS05185	0.10	-2.9
1,216,435	-		LRK53_RS05185	0.10	+0.1
1,216,435	-		LRK53_RS05185	0.10	-2.9
1,216,435	-		LRK53_RS05185	0.10	-0.9
1,216,435	-		LRK53_RS05185	0.10	-1.0
1,216,435	-		LRK53_RS05185	0.10	-0.4
1,216,435	-		LRK53_RS05185	0.10	-0.9
1,216,435	-		LRK53_RS05185	0.10	-1.9
1,216,435	-		LRK53_RS05185	0.10	+1.3
1,216,435	-		LRK53_RS05185	0.10	-0.3
1,216,440	+		LRK53_RS05185	0.11	+1.6
1,216,441	-		LRK53_RS05185	0.11	-2.8
1,216,500	+		LRK53_RS05185	0.12	-1.6
1,216,500	+		LRK53_RS05185	0.12	-1.3
1,216,500	+		LRK53_RS05185	0.12	-0.6
1,216,500	+		LRK53_RS05185	0.12	-0.6
1,216,500	+		LRK53_RS05185	0.12	-1.2
1,216,500	+		LRK53_RS05185	0.12	-0.4
1,216,500	+		LRK53_RS05185	0.12	+0.5
1,216,500	+		LRK53_RS05185	0.12	-0.5
1,216,500	+		LRK53_RS05185	0.12	+0.7
1,216,500	+		LRK53_RS05185	0.12	+1.3
1,216,500	+		LRK53_RS05185	0.12	-0.4
1,216,500	+		LRK53_RS05185	0.12	+0.4
1,216,500	+		LRK53_RS05185	0.12	+0.4
1,216,500	+		LRK53_RS05185	0.12	-0.1
1,216,500	+		LRK53_RS05185	0.12	-1.5
1,216,500	+		LRK53_RS05185	0.12	-2.2
1,216,500	+		LRK53_RS05185	0.12	-2.0
1,216,500	+		LRK53_RS05185	0.12	-1.8
1,216,500	+		LRK53_RS05185	0.12	-1.3
1,216,500	+		LRK53_RS05185	0.12	+2.9
1,216,500	+		LRK53_RS05185	0.12	-0.4
1,216,500	+		LRK53_RS05185	0.12	-1.1
1,216,500	+		LRK53_RS05185	0.12	+0.3
1,216,500	+		LRK53_RS05185	0.12	-0.6
1,216,500	+		LRK53_RS05185	0.12	-1.2
1,216,500	+		LRK53_RS05185	0.12	+0.7
1,216,500	+		LRK53_RS05185	0.12	+0.5
1,216,500	+		LRK53_RS05185	0.12	-0.9
1,216,500	+		LRK53_RS05185	0.12	-0.6
1,216,500	+		LRK53_RS05185	0.12	+2.0
1,216,500	+		LRK53_RS05185	0.12	+0.7
1,216,500	+		LRK53_RS05185	0.12	+1.3
1,216,500	+		LRK53_RS05185	0.12	+0.7
1,216,500	+		LRK53_RS05185	0.12	+0.5
1,216,500	+		LRK53_RS05185	0.12	+0.3
1,216,500	+		LRK53_RS05185	0.12	-1.4
1,216,500	+		LRK53_RS05185	0.12	-0.1
1,216,501	-		LRK53_RS05185	0.12	+0.3
1,216,501	-		LRK53_RS05185	0.12	-0.5
1,216,501	-		LRK53_RS05185	0.12	+0.6
1,216,501	-		LRK53_RS05185	0.12	-2.8
1,216,501	-		LRK53_RS05185	0.12	-0.3
1,216,501	-		LRK53_RS05185	0.12	-1.7
1,216,501	-		LRK53_RS05185	0.12	-0.6
1,216,501	-		LRK53_RS05185	0.12	-1.6
1,216,501	-		LRK53_RS05185	0.12	-1.0
1,216,501	-		LRK53_RS05185	0.12	-0.3
1,216,501	-		LRK53_RS05185	0.12	+0.9
1,216,501	-		LRK53_RS05185	0.12	-1.7
1,216,501	-		LRK53_RS05185	0.12	-1.3
1,216,501	-		LRK53_RS05185	0.12	-0.6
1,216,501	-		LRK53_RS05185	0.12	-1.4
1,216,501	-		LRK53_RS05185	0.12	-0.7
1,216,501	-		LRK53_RS05185	0.12	-0.6
1,216,501	-		LRK53_RS05185	0.12	-0.7
1,216,501	-		LRK53_RS05185	0.12	+0.1
1,216,501	-		LRK53_RS05185	0.12	-1.9
1,216,501	-		LRK53_RS05185	0.12	+0.8
1,216,501	-		LRK53_RS05185	0.12	+1.6
1,216,501	-		LRK53_RS05185	0.12	+2.3
1,216,501	-		LRK53_RS05185	0.12	-1.6
1,216,501	-		LRK53_RS05185	0.12	+0.5
1,216,501	-		LRK53_RS05185	0.12	+1.0
1,216,501	-		LRK53_RS05185	0.12	-1.0
1,216,501	-		LRK53_RS05185	0.12	-0.3
1,216,501	-		LRK53_RS05185	0.12	+0.4
1,216,501	-		LRK53_RS05185	0.12	-1.7
1,216,501	-		LRK53_RS05185	0.12	+0.9
1,216,501	-		LRK53_RS05185	0.12	+2.9
1,216,501	-		LRK53_RS05185	0.12	-2.3
1,216,501	-		LRK53_RS05185	0.12	-1.8
1,216,501	-		LRK53_RS05185	0.12	-0.6
1,216,501	-		LRK53_RS05185	0.12	-1.0
1,216,501	-		LRK53_RS05185	0.12	-1.0
1,216,530	+		LRK53_RS05185	0.13	+0.0
1,216,530	+		LRK53_RS05185	0.13	-0.5
1,216,530	+		LRK53_RS05185	0.13	-0.1
1,216,531	-		LRK53_RS05185	0.13	-1.9
1,216,641	+		LRK53_RS05185	0.17	+0.1
1,216,641	+		LRK53_RS05185	0.17	+0.6
1,216,641	+		LRK53_RS05185	0.17	-0.6
1,216,641	+		LRK53_RS05185	0.17	-1.0
1,216,641	+		LRK53_RS05185	0.17	-0.8
1,216,641	+		LRK53_RS05185	0.17	+0.1
1,216,641	+		LRK53_RS05185	0.17	-2.2
1,216,641	+		LRK53_RS05185	0.17	-1.3
1,216,641	+		LRK53_RS05185	0.17	-0.1
1,216,641	+		LRK53_RS05185	0.17	-0.7
1,216,641	+		LRK53_RS05185	0.17	-1.4
1,216,641	+		LRK53_RS05185	0.17	-0.3
1,216,642	-		LRK53_RS05185	0.17	+0.2
1,216,642	-		LRK53_RS05185	0.17	-1.5
1,216,642	-		LRK53_RS05185	0.17	+0.6
1,216,642	-		LRK53_RS05185	0.17	-0.9
1,216,642	-		LRK53_RS05185	0.17	+0.2
1,216,642	-		LRK53_RS05185	0.17	-0.1
1,216,642	-		LRK53_RS05185	0.17	+0.8
1,216,642	-		LRK53_RS05185	0.17	+0.4
1,216,642	-		LRK53_RS05185	0.17	-0.4
1,216,642	-		LRK53_RS05185	0.17	-0.2
1,216,642	-		LRK53_RS05185	0.17	+0.8
1,216,642	-		LRK53_RS05185	0.17	-0.2
1,216,753	-		LRK53_RS05185	0.20	-0.9
1,216,753	-		LRK53_RS05185	0.20	-1.1