Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05055

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,191,166	+				+1.9
1,191,166	+				-0.5
1,191,167	-				+0.6
1,191,167	-				-1.3
1,191,839	+				-0.9
1,191,839	+				+0.0
1,191,839	+				+0.0
1,191,839	+				-1.3
1,191,840	-				-0.1
1,191,840	-				+1.1
1,191,840	-				-0.7
1,191,845	+				-1.5
1,191,975	+				-1.7
1,191,975	+				-0.1
1,191,975	+				+0.6
1,191,976	-				+0.3
1,191,976	-				-1.1
1,191,976	-				-0.2
1,191,976	-				-0.4
1,191,976	-				+0.1
1,191,976	-				-0.7
1,191,976	-				-1.0
1,191,976	-				+0.1
1,191,976	-				-0.8
1,192,029	+				-1.2
1,192,029	+				+0.3
1,192,029	+				-0.6
1,192,029	+				-1.8
1,192,029	+				-2.5
1,192,029	+				-0.1
1,192,029	+				-1.0
1,192,029	+				+0.3
1,192,029	+				+0.2
1,192,029	+				-1.8
1,192,029	+				+0.3
1,192,029	+				-1.7
1,192,029	+				-0.1
1,192,029	+				-0.4
1,192,029	+				-2.0
1,192,029	+				-2.2
1,192,029	+				-0.3
1,192,030	-				-1.0
1,192,030	-				+1.7
1,192,030	-				-1.1
1,192,030	-				-1.5
1,192,030	-				+0.5
1,192,523	+		LRK53_RS05055	0.19	-0.6
1,192,523	+		LRK53_RS05055	0.19	+0.5
1,192,523	+		LRK53_RS05055	0.19	-0.2
1,192,523	+		LRK53_RS05055	0.19	-0.5
1,192,523	+		LRK53_RS05055	0.19	-0.1
1,192,523	+		LRK53_RS05055	0.19	-1.8
1,192,523	+		LRK53_RS05055	0.19	-1.0
1,192,523	+		LRK53_RS05055	0.19	+0.9
1,192,523	+		LRK53_RS05055	0.19	-0.8
1,192,523	+		LRK53_RS05055	0.19	-1.5
1,192,524	-		LRK53_RS05055	0.19	+0.7
1,192,524	-		LRK53_RS05055	0.19	-1.2
1,192,524	-		LRK53_RS05055	0.19	-0.1
1,192,524	-		LRK53_RS05055	0.19	+0.5
1,192,997	+		LRK53_RS05055	0.37	-1.7
1,192,997	+		LRK53_RS05055	0.37	-2.5
1,192,997	+		LRK53_RS05055	0.37	-1.1
1,192,997	+		LRK53_RS05055	0.37	-0.9
1,192,997	+		LRK53_RS05055	0.37	-0.7
1,192,997	+		LRK53_RS05055	0.37	-0.7
1,192,997	+		LRK53_RS05055	0.37	-0.4
1,192,997	+		LRK53_RS05055	0.37	-0.1
1,192,997	+		LRK53_RS05055	0.37	-3.2
1,192,998	-		LRK53_RS05055	0.37	-1.0
1,192,998	-		LRK53_RS05055	0.37	-1.1
1,192,998	-		LRK53_RS05055	0.37	-1.5
1,192,998	-		LRK53_RS05055	0.37	-2.5
1,192,998	-		LRK53_RS05055	0.37	-2.1
1,192,998	-		LRK53_RS05055	0.37	-1.0
1,193,172	-		LRK53_RS05055	0.44	-1.0
1,193,172	-		LRK53_RS05055	0.44	-1.9
1,193,172	-		LRK53_RS05055	0.44	-0.4
1,193,172	-		LRK53_RS05055	0.44	-2.2
1,193,172	-		LRK53_RS05055	0.44	-0.7
1,193,172	-		LRK53_RS05055	0.44	+0.2
1,193,516	+		LRK53_RS05055	0.57	-1.6
1,193,516	+		LRK53_RS05055	0.57	-2.0
1,193,516	+		LRK53_RS05055	0.57	-2.9
1,193,516	+		LRK53_RS05055	0.57	-0.3
1,193,516	+		LRK53_RS05055	0.57	-0.6
1,193,517	-		LRK53_RS05055	0.57	+0.4
1,193,517	-		LRK53_RS05055	0.57	-1.3
1,193,540	+		LRK53_RS05055	0.58	-2.2
1,193,541	-		LRK53_RS05055	0.58	-0.6
1,193,541	-		LRK53_RS05055	0.58	+0.6
1,193,990	+		LRK53_RS05055	0.75	-2.8
1,193,990	+		LRK53_RS05055	0.75	-0.8
1,193,990	+		LRK53_RS05055	0.75	-1.6
1,193,990	+		LRK53_RS05055	0.75	-0.5
1,193,991	-		LRK53_RS05055	0.75	-1.4
1,194,014	+		LRK53_RS05055	0.76	-1.2
1,194,014	+		LRK53_RS05055	0.76	-0.1
1,194,015	-		LRK53_RS05055	0.76	-0.7
1,194,015	-		LRK53_RS05055	0.76	+0.2
1,194,045	-		LRK53_RS05055	0.77	-0.3
1,194,254	+		LRK53_RS05055	0.85	+0.7
1,194,254	+		LRK53_RS05055	0.85	+0.7
1,194,254	+		LRK53_RS05055	0.85	-1.2
1,194,255	-		LRK53_RS05055	0.85	-2.6
1,194,255	-		LRK53_RS05055	0.85	-1.7
1,194,255	-		LRK53_RS05055	0.85	-2.9
1,194,255	-		LRK53_RS05055	0.85	+0.0
1,194,255	-		LRK53_RS05055	0.85	-1.3
1,194,255	-		LRK53_RS05055	0.85	-0.8
1,194,395	+				-1.3
1,194,395	+				-1.2
1,194,396	-				-1.6
1,194,396	-				-1.2
1,194,396	-				-0.4
1,194,396	-				+1.9
1,194,396	-				-0.6
1,194,396	-				-1.4
1,194,396	-				-1.7
1,194,488	+				-0.6
1,194,489	-				-1.1
1,194,489	-				-0.7
1,194,810	+		LRK53_RS05060	0.37	-0.7
1,194,811	-		LRK53_RS05060	0.37	+1.4
1,194,900	+		LRK53_RS05060	0.68	-0.4
1,194,900	+		LRK53_RS05060	0.68	+0.1
1,194,900	+		LRK53_RS05060	0.68	-0.2
1,194,901	-		LRK53_RS05060	0.69	-2.1
1,194,901	-		LRK53_RS05060	0.69	-1.8
1,195,049	+				-1.4
1,195,049	+				-0.5
1,195,050	-				-1.4
1,195,092	-				+0.3
1,195,163	+				-0.3
1,195,163	+				+0.2
1,195,163	+				-0.7
1,195,164	-				-1.2
1,195,164	-				-1.5
1,195,225	-				-2.2