Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04690

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,090,945	+				+1.3
1,090,945	+				+0.1
1,090,945	+				+0.0
1,090,945	+				-0.1
1,090,945	+				-0.1
1,090,945	+				+0.1
1,090,945	+				+1.6
1,090,945	+				-0.1
1,090,945	+				-1.4
1,090,946	-				+0.6
1,090,946	-				-0.2
1,090,946	-				-0.9
1,090,946	-				-0.8
1,090,946	-				+1.1
1,090,946	-				-1.5
1,090,946	-				-2.4
1,090,946	-				-0.1
1,090,946	-				-1.2
1,090,946	-				-0.3
1,090,946	-				-0.4
1,090,946	-				-0.7
1,090,955	+				-1.2
1,090,979	+				-1.0
1,090,979	+				-0.7
1,090,979	+				-0.1
1,090,979	+				-2.9
1,090,979	+				+0.2
1,090,979	+				-1.1
1,090,979	+				+0.8
1,090,979	+				-1.3
1,090,980	-				+0.7
1,090,980	-				-0.8
1,090,980	-				-0.2
1,090,980	-				-1.0
1,090,980	-				+0.1
1,091,016	+				-0.6
1,091,016	+				-0.9
1,091,016	+				+0.5
1,091,016	+				-0.2
1,091,016	+				-1.5
1,091,017	-				-0.5
1,091,017	-				-0.6
1,091,017	-				-1.2
1,091,017	-				-0.2
1,091,017	-				-2.3
1,091,017	-				-3.1
1,091,017	-				-1.4
1,091,017	-				-0.1
1,091,238	+		LRK53_RS04685	0.31	-0.3
1,091,239	-		LRK53_RS04685	0.31	-0.6
1,091,239	-		LRK53_RS04685	0.31	-0.7
1,091,239	-		LRK53_RS04685	0.31	+1.2
1,091,466	+		LRK53_RS04685	0.62	-0.3
1,091,466	+		LRK53_RS04685	0.62	-0.8
1,091,466	+		LRK53_RS04685	0.62	-0.4
1,091,466	+		LRK53_RS04685	0.62	-1.3
1,091,466	+		LRK53_RS04685	0.62	+0.9
1,091,466	+		LRK53_RS04685	0.62	-1.2
1,091,466	+		LRK53_RS04685	0.62	-1.7
1,091,466	+		LRK53_RS04685	0.62	+0.4
1,091,467	-		LRK53_RS04685	0.63	-1.5
1,091,467	-		LRK53_RS04685	0.63	+0.8
1,091,467	-		LRK53_RS04685	0.63	-0.1
1,091,467	-		LRK53_RS04685	0.63	-1.0
1,091,467	-		LRK53_RS04685	0.63	+0.1
1,091,467	-		LRK53_RS04685	0.63	+0.4
1,091,467	-		LRK53_RS04685	0.63	+0.4
1,091,577	+		LRK53_RS04685	0.78	-1.1
1,091,577	+		LRK53_RS04685	0.78	-0.6
1,091,577	+		LRK53_RS04685	0.78	+0.1
1,091,577	+		LRK53_RS04685	0.78	-1.7
1,091,577	+		LRK53_RS04685	0.78	-0.6
1,091,577	+		LRK53_RS04685	0.78	-2.2
1,091,577	+		LRK53_RS04685	0.78	-0.5
1,091,577	+		LRK53_RS04685	0.78	-0.8
1,091,577	+		LRK53_RS04685	0.78	-0.8
1,091,578	-		LRK53_RS04685	0.78	+0.0
1,091,578	-		LRK53_RS04685	0.78	+0.1
1,091,578	-		LRK53_RS04685	0.78	-2.4
1,091,578	-		LRK53_RS04685	0.78	+0.3
1,091,578	-		LRK53_RS04685	0.78	-0.3
1,091,578	-		LRK53_RS04685	0.78	-1.9
1,091,743	+				+0.6
1,091,743	+				+0.3
1,091,744	-				-3.1
1,091,744	-				-2.7
1,091,748	+				-1.4
1,091,782	-				-0.5
1,091,879	-				+0.1
1,091,879	-				-1.1
1,091,959	+				-0.2
1,092,235	+		LRK53_RS04690	0.35	-0.0
1,092,235	+		LRK53_RS04690	0.35	+0.3
1,092,235	+		LRK53_RS04690	0.35	+1.0
1,092,235	+		LRK53_RS04690	0.35	+0.6
1,092,235	+		LRK53_RS04690	0.35	-1.6
1,092,235	+		LRK53_RS04690	0.35	-2.4
1,092,235	+		LRK53_RS04690	0.35	-1.1
1,092,235	+		LRK53_RS04690	0.35	-0.0
1,092,236	-		LRK53_RS04690	0.35	-0.8
1,092,236	-		LRK53_RS04690	0.35	+1.3
1,092,236	-		LRK53_RS04690	0.35	-1.7
1,092,236	-		LRK53_RS04690	0.35	-2.2
1,092,236	-		LRK53_RS04690	0.35	-2.0
1,092,236	-		LRK53_RS04690	0.35	+0.6
1,092,512	-		LRK53_RS04690	0.63	-1.8
1,092,512	-		LRK53_RS04690	0.63	-1.1
1,092,529	+		LRK53_RS04690	0.64	+0.6
1,092,529	+		LRK53_RS04690	0.64	+0.4
1,092,529	+		LRK53_RS04690	0.64	+0.1
1,092,529	+		LRK53_RS04690	0.64	+0.9
1,092,530	-		LRK53_RS04690	0.64	-1.2
1,092,530	-		LRK53_RS04690	0.64	+1.5
1,092,530	-		LRK53_RS04690	0.64	-0.4
1,092,668	+		LRK53_RS04690	0.78	+0.0
1,092,991	+				-1.4
1,092,991	+				-0.3
1,092,992	-				-0.6
1,092,992	-				-3.8
1,092,996	-				-0.5
1,092,996	-				-1.6
1,092,996	-				-0.2
1,092,996	-				-1.6
1,093,001	+				-1.2
1,093,001	+				-1.2
1,093,001	+				-0.2
1,093,001	+				-1.9
1,093,001	+				-0.5
1,093,001	+				-0.1
1,093,001	+				+0.6
1,093,001	+				-0.7
1,093,001	+				-0.5
1,093,001	+				+0.1
1,093,001	+				-2.8
1,093,001	+				-0.5
1,093,001	+				+1.0
1,093,001	+				-2.3
1,093,001	+				+0.0
1,093,001	+				-0.1
1,093,001	+				-1.2
1,093,001	+				-0.1
1,093,001	+				-0.1
1,093,001	+				-0.2
1,093,001	+				-0.7
1,093,001	+				-1.3
1,093,001	+				+1.0
1,093,001	+				-1.5
1,093,002	-				+0.1
1,093,002	-				+0.6
1,093,002	-				+0.3
1,093,002	-				-0.3
1,093,002	-				-0.9
1,093,002	-				+0.7
1,093,002	-				+0.9
1,093,002	-				+0.4
1,093,002	-				-1.5
1,093,002	-				-3.2
1,093,002	-				-2.1
1,093,002	-				-1.8
1,093,002	-				-1.8
1,093,002	-				-1.7
1,093,002	-				-0.6
1,093,003	+				+0.5
1,093,003	+				+0.4
1,093,003	+				-0.0
1,093,003	+				-0.6
1,093,003	+				-0.3
1,093,003	+				-0.2
1,093,003	+				+0.1
1,093,003	+				-0.1
1,093,003	+				-0.9
1,093,003	+				-0.2
1,093,003	+				+0.2
1,093,003	+				+0.1
1,093,003	+				-0.0
1,093,003	+				-0.1
1,093,003	+				-1.8
1,093,003	+				-1.5
1,093,003	+				-0.1
1,093,003	+				-1.9
1,093,004	-				-1.2
1,093,004	-				-0.8
1,093,004	-				-0.4
1,093,004	-				+1.0
1,093,004	-				-2.0
1,093,004	-				+0.6
1,093,004	-				+0.3
1,093,004	-				-2.8
1,093,004	-				-1.5
1,093,004	-				+0.3
1,093,004	-				+0.6
1,093,005	+				-0.9
1,093,005	+				+1.9
1,093,005	+				-0.4
1,093,005	+				-0.6
1,093,005	+				-0.2
1,093,006	-				-0.9
1,093,006	-				-1.1
1,093,006	-				+2.2
1,093,011	+				-1.6
1,093,027	+				+0.8
1,093,027	+				+1.5
1,093,055	+				+0.3
1,093,055	+				-1.3
1,093,234	-				-0.6
1,093,391	-		LRK53_RS04695	0.12	-0.1
1,093,391	-		LRK53_RS04695	0.12	+1.3
1,093,391	-		LRK53_RS04695	0.12	-1.6
1,093,391	-		LRK53_RS04695	0.12	-0.3
1,093,423	+		LRK53_RS04695	0.15	-0.8
1,093,423	+		LRK53_RS04695	0.15	-2.6
1,093,423	+		LRK53_RS04695	0.15	-0.9
1,093,423	+		LRK53_RS04695	0.15	-1.0
1,093,423	+		LRK53_RS04695	0.15	-1.7
1,093,423	+		LRK53_RS04695	0.15	-1.6
1,093,423	+		LRK53_RS04695	0.15	-0.3
1,093,423	+		LRK53_RS04695	0.15	-0.3
1,093,424	-		LRK53_RS04695	0.15	-0.7
1,093,424	-		LRK53_RS04695	0.15	-0.9
1,093,424	-		LRK53_RS04695	0.15	+1.9
1,093,715	-		LRK53_RS04695	0.44	-0.9