Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS03495

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
822,949	+		LRK53_RS03485	0.77	-0.2
822,949	+		LRK53_RS03485	0.77	-0.7
822,950	-		LRK53_RS03485	0.78	+3.1
822,950	-		LRK53_RS03485	0.78	-0.3
822,983	+		LRK53_RS03485	0.82	-0.6
822,983	+		LRK53_RS03485	0.82	+1.7
822,983	+		LRK53_RS03485	0.82	-0.6
822,983	+		LRK53_RS03485	0.82	-0.9
822,983	+		LRK53_RS03485	0.82	-1.3
822,983	+		LRK53_RS03485	0.82	+1.5
822,983	+		LRK53_RS03485	0.82	-2.1
822,983	+		LRK53_RS03485	0.82	+0.8
822,984	-		LRK53_RS03485	0.82	-0.6
822,984	-		LRK53_RS03485	0.82	-1.9
822,984	-		LRK53_RS03485	0.82	-2.4
822,984	-		LRK53_RS03485	0.82	+0.1
822,984	-		LRK53_RS03485	0.82	+0.3
822,984	-		LRK53_RS03485	0.82	+0.1
822,984	-		LRK53_RS03485	0.82	-0.7
823,166	+				-1.1
823,166	+				+0.5
823,166	+				+0.5
823,166	+				-0.5
823,166	+				+0.4
823,166	+				-2.3
823,166	+				-0.8
823,166	+				-0.4
823,166	+				+0.8
823,166	+				-0.0
823,166	+				-1.2
823,166	+				+0.1
823,167	-				+1.2
823,167	-				-0.8
823,167	-				-2.4
823,167	-				-0.1
823,167	-				-1.2
823,167	-				-0.8
823,167	-				+0.0
823,167	-				-0.5
823,167	-				-1.4
823,167	-				+0.7
823,229	+		LRK53_RS03490	0.15	-0.2
823,229	+		LRK53_RS03490	0.15	+0.3
823,230	-		LRK53_RS03490	0.15	+0.6
823,230	-		LRK53_RS03490	0.15	-1.7
823,230	-		LRK53_RS03490	0.15	-0.5
823,230	-		LRK53_RS03490	0.15	-1.2
823,317	-		LRK53_RS03490	0.30	-0.2
823,325	+		LRK53_RS03490	0.31	-0.7
823,325	+		LRK53_RS03490	0.31	+0.3
823,325	+		LRK53_RS03490	0.31	+0.8
823,325	+		LRK53_RS03490	0.31	+1.1
823,326	-		LRK53_RS03490	0.31	+0.5
823,326	-		LRK53_RS03490	0.31	-0.0
823,408	+		LRK53_RS03490	0.45	+0.8
823,408	+		LRK53_RS03490	0.45	-2.5
823,408	+		LRK53_RS03490	0.45	+1.8
823,409	-		LRK53_RS03490	0.46	-0.5
823,409	-		LRK53_RS03490	0.46	-0.8
823,409	-		LRK53_RS03490	0.46	-2.5
823,409	-		LRK53_RS03490	0.46	-0.8
823,409	-		LRK53_RS03490	0.46	+0.1
823,409	-		LRK53_RS03490	0.46	-1.5
823,409	-		LRK53_RS03490	0.46	-1.9
823,443	-		LRK53_RS03490	0.51	-0.2
823,443	-		LRK53_RS03490	0.51	-2.1
823,526	+		LRK53_RS03490	0.65	+0.3
823,526	+		LRK53_RS03490	0.65	+0.0
823,526	+		LRK53_RS03490	0.65	-1.1
823,526	+		LRK53_RS03490	0.65	-2.2
823,526	+		LRK53_RS03490	0.65	+0.1
823,526	+		LRK53_RS03490	0.65	-1.2
823,526	+		LRK53_RS03490	0.65	-0.9
823,526	+		LRK53_RS03490	0.65	-1.2
823,527	-		LRK53_RS03490	0.66	-0.8
823,527	-		LRK53_RS03490	0.66	-0.9
823,527	-		LRK53_RS03490	0.66	-0.2
823,527	-		LRK53_RS03490	0.66	+1.3
823,527	-		LRK53_RS03490	0.66	-0.4
823,527	-		LRK53_RS03490	0.66	-3.1
823,527	-		LRK53_RS03490	0.66	-1.2
823,527	-		LRK53_RS03490	0.66	-1.6
823,527	-		LRK53_RS03490	0.66	-0.8
823,527	-		LRK53_RS03490	0.66	-1.5
823,527	-		LRK53_RS03490	0.66	-0.2
823,527	-		LRK53_RS03490	0.66	-0.6
823,661	+		LRK53_RS03490	0.88	-1.0
823,661	+		LRK53_RS03490	0.88	-1.0
823,661	+		LRK53_RS03490	0.88	-0.6
823,661	+		LRK53_RS03490	0.88	-2.3
823,661	+		LRK53_RS03490	0.88	-3.3
823,661	+		LRK53_RS03490	0.88	+0.1
823,661	+		LRK53_RS03490	0.88	-0.8
823,661	+		LRK53_RS03490	0.88	-0.3
823,661	+		LRK53_RS03490	0.88	-1.1
823,662	-		LRK53_RS03490	0.89	-1.4
823,662	-		LRK53_RS03490	0.89	-1.8
823,662	-		LRK53_RS03490	0.89	-1.0
823,662	-		LRK53_RS03490	0.89	-0.4
823,662	-		LRK53_RS03490	0.89	-1.2
823,662	-		LRK53_RS03490	0.89	+0.9
823,662	-		LRK53_RS03490	0.89	-1.5
823,662	-		LRK53_RS03490	0.89	-2.5
823,662	-		LRK53_RS03490	0.89	+0.7
823,662	-		LRK53_RS03490	0.89	+2.0
823,662	-		LRK53_RS03490	0.89	-0.6
823,662	-		LRK53_RS03490	0.89	-0.3
823,662	-		LRK53_RS03490	0.89	-0.8
823,662	-		LRK53_RS03490	0.89	-2.1
823,662	-		LRK53_RS03490	0.89	-0.8
823,662	-		LRK53_RS03490	0.89	+0.9
823,662	-		LRK53_RS03490	0.89	-0.7
823,662	-		LRK53_RS03490	0.89	-0.5
823,820	+				-0.1
823,820	+				-0.2
823,820	+				+0.3
823,820	+				-1.5
823,820	+				-0.6
823,821	-				-1.4
823,821	-				-0.8
823,821	-				-1.6
823,821	-				-0.5
823,821	-				-1.3
823,821	-				+1.0
823,821	-				-0.0
823,821	-				+1.0
823,821	-				-0.3
823,821	-				+0.1
823,821	-				+0.2
823,821	-				+0.8
823,821	-				-1.8
823,821	-				+0.3
823,821	-				+0.6
824,107	+		LRK53_RS03495	0.24	+1.1
824,107	+		LRK53_RS03495	0.24	-0.8
824,107	+		LRK53_RS03495	0.24	+1.1
824,107	+		LRK53_RS03495	0.24	-0.2
824,107	+		LRK53_RS03495	0.24	-1.9
824,107	+		LRK53_RS03495	0.24	-0.4
824,107	+		LRK53_RS03495	0.24	-1.4
824,107	+		LRK53_RS03495	0.24	-1.8
824,107	+		LRK53_RS03495	0.24	-0.1
824,108	-		LRK53_RS03495	0.24	-1.1
824,108	-		LRK53_RS03495	0.24	+0.7
824,108	-		LRK53_RS03495	0.24	-2.3
824,380	+		LRK53_RS03495	0.53	+0.6
824,380	+		LRK53_RS03495	0.53	+1.2
824,380	+		LRK53_RS03495	0.53	+0.2
824,380	+		LRK53_RS03495	0.53	+0.3
824,380	+		LRK53_RS03495	0.53	+0.6
824,380	+		LRK53_RS03495	0.53	-1.4
824,380	+		LRK53_RS03495	0.53	-3.1
824,380	+		LRK53_RS03495	0.53	-0.8
824,381	-		LRK53_RS03495	0.53	-0.7
824,381	-		LRK53_RS03495	0.53	-0.2
824,381	-		LRK53_RS03495	0.53	-0.1
824,381	-		LRK53_RS03495	0.53	+0.4
824,381	-		LRK53_RS03495	0.53	-0.6
824,381	-		LRK53_RS03495	0.53	-1.5
824,381	-		LRK53_RS03495	0.53	-1.3
824,381	-		LRK53_RS03495	0.53	+1.7
824,381	-		LRK53_RS03495	0.53	+0.6
824,488	+		LRK53_RS03495	0.64	+2.0
824,488	+		LRK53_RS03495	0.64	-0.5
824,488	+		LRK53_RS03495	0.64	+1.4
824,488	+		LRK53_RS03495	0.64	-0.7
824,488	+		LRK53_RS03495	0.64	-0.2
824,488	+		LRK53_RS03495	0.64	+0.1
824,488	+		LRK53_RS03495	0.64	-1.4
824,488	+		LRK53_RS03495	0.64	-1.4
824,489	-		LRK53_RS03495	0.64	-0.8
824,489	-		LRK53_RS03495	0.64	-0.6
824,489	-		LRK53_RS03495	0.64	-1.6
824,489	-		LRK53_RS03495	0.64	-1.2
824,489	-		LRK53_RS03495	0.64	-2.4
824,489	-		LRK53_RS03495	0.64	-2.9
824,647	+		LRK53_RS03495	0.81	+0.6
824,647	+		LRK53_RS03495	0.81	-0.8
824,647	+		LRK53_RS03495	0.81	-2.5
824,647	+		LRK53_RS03495	0.81	+1.3
824,647	+		LRK53_RS03495	0.81	-0.8
824,648	-		LRK53_RS03495	0.81	-0.5
824,648	-		LRK53_RS03495	0.81	+0.1
824,648	-		LRK53_RS03495	0.81	-0.4
824,648	-		LRK53_RS03495	0.81	-1.5
824,648	-		LRK53_RS03495	0.81	-0.5
824,648	-		LRK53_RS03495	0.81	+0.6
824,648	-		LRK53_RS03495	0.81	-2.2
824,650	+		LRK53_RS03495	0.81	-0.0
824,650	+		LRK53_RS03495	0.81	-2.3
824,650	+		LRK53_RS03495	0.81	-0.6
824,650	+		LRK53_RS03495	0.81	-2.8
824,650	+		LRK53_RS03495	0.81	-0.9
824,650	+		LRK53_RS03495	0.81	+1.9
824,651	-		LRK53_RS03495	0.81	-0.3
824,651	-		LRK53_RS03495	0.81	-0.4
824,651	-		LRK53_RS03495	0.81	-0.6
824,651	-		LRK53_RS03495	0.81	+3.6
824,755	+				-0.6
824,755	+				-1.3
824,755	+				-0.5
824,755	+				-1.8
824,755	+				-0.1
824,755	+				-1.5
824,755	+				+0.7
824,755	+				-0.1
824,755	+				-0.4
824,756	-				-1.0
824,756	-				-0.1
824,756	-				-0.7
824,756	-				-1.3
824,756	-				+0.1
824,756	-				-1.0
824,911	+				-1.1
824,911	+				-0.4
824,911	+				+0.6
824,911	+				-0.8
824,911	+				-2.2
824,911	+				-1.1
824,911	+				-0.2
824,912	-				+0.3
824,912	-				-0.4
824,912	-				-1.8
824,912	-				-0.6
824,912	-				-0.6
824,912	-				+0.4
824,912	-				-0.3
824,912	-				-0.3
824,912	-				-1.9
824,912	-				-1.1
824,965	+				-1.5
824,966	-				-0.4
824,966	-				-0.2
824,966	-				-1.6
825,012	+				-0.4
825,012	+				+0.4
825,012	+				-1.4
825,012	+				+0.1
825,013	-				-1.3
825,072	+				-0.5
825,093	+				-0.1
825,093	+				+0.4
825,093	+				-0.6
825,093	+				-1.1
825,094	-				-2.0
825,094	-				+0.5
825,094	-				-0.5
825,094	-				+0.5
825,144	+				-1.4
825,144	+				+0.6
825,144	+				+0.3
825,144	+				-0.1
825,144	+				-0.8
825,144	+				-0.0
825,144	+				+0.6
825,144	+				-1.3
825,144	+				-2.8
825,144	+				-1.4
825,144	+				-0.2
825,144	+				-1.1
825,144	+				-0.6
825,145	-				-0.9
825,145	-				+0.7
825,145	-				-1.6
825,145	-				-0.9
825,145	-				-1.4
825,145	-				-1.1
825,145	-				-1.0
825,145	-				-1.4
825,145	-				-1.0
825,145	-				-1.0
825,145	-				-0.5
825,145	-				-2.5
825,145	-				-3.4
825,145	-				-0.4
825,145	-				-0.6
825,145	-				+0.5
825,162	+				-1.4
825,162	+				+2.0
825,162	+				-0.6
825,162	+				+0.5
825,162	+				+0.5
825,162	+				-1.8
825,162	+				-1.4
825,162	+				-0.1
825,162	+				+0.3
825,162	+				-2.0
825,162	+				-0.1
825,162	+				-3.2
825,162	+				-1.2
825,162	+				-0.2
825,162	+				-1.5
825,162	+				-0.3
825,162	+				-2.2
825,162	+				-0.5
825,162	+				-0.1
825,162	+				-0.5
825,162	+				+0.5
825,163	-				-1.0
825,163	-				-0.1
825,163	-				-0.1
825,163	-				-0.5
825,163	-				-0.3
825,163	-				-0.1
825,163	-				-2.0
825,163	-				-0.9
825,163	-				+1.1
825,163	-				-0.2
825,163	-				-1.4
825,163	-				-0.6
825,163	-				+0.5
825,163	-				-1.2
825,163	-				-0.6
825,238	+		LRK53_RS03500	0.12	-0.0
825,238	+		LRK53_RS03500	0.12	-0.5
825,238	+		LRK53_RS03500	0.12	+0.2
825,238	+		LRK53_RS03500	0.12	+0.3
825,238	+		LRK53_RS03500	0.12	-0.5
825,239	-		LRK53_RS03500	0.12	-0.6
825,239	-		LRK53_RS03500	0.12	+1.1
825,239	-		LRK53_RS03500	0.12	-0.7
825,239	-		LRK53_RS03500	0.12	-0.9
825,239	-		LRK53_RS03500	0.12	-1.6
825,240	+		LRK53_RS03500	0.12	+1.1
825,240	+		LRK53_RS03500	0.12	-0.4
825,240	+		LRK53_RS03500	0.12	-0.8
825,240	+		LRK53_RS03500	0.12	-1.2
825,240	+		LRK53_RS03500	0.12	-2.1
825,240	+		LRK53_RS03500	0.12	-1.8
825,241	-		LRK53_RS03500	0.12	-2.9
825,241	-		LRK53_RS03500	0.12	-0.6
825,241	-		LRK53_RS03500	0.12	-1.8
825,241	-		LRK53_RS03500	0.12	-0.2
825,241	-		LRK53_RS03500	0.12	+0.1
825,241	-		LRK53_RS03500	0.12	-1.7
825,348	+		LRK53_RS03500	0.18	+0.3
825,348	+		LRK53_RS03500	0.18	-1.3
825,348	+		LRK53_RS03500	0.18	-0.7
825,348	+		LRK53_RS03500	0.18	-0.4
825,348	+		LRK53_RS03500	0.18	+2.2
825,348	+		LRK53_RS03500	0.18	+0.5
825,348	+		LRK53_RS03500	0.18	+0.1
825,348	+		LRK53_RS03500	0.18	-1.3
825,348	+		LRK53_RS03500	0.18	-0.8
825,348	+		LRK53_RS03500	0.18	-0.1
825,348	+		LRK53_RS03500	0.18	-1.7
825,348	+		LRK53_RS03500	0.18	-0.0
825,348	+		LRK53_RS03500	0.18	-0.1
825,348	+		LRK53_RS03500	0.18	-1.1
825,348	+		LRK53_RS03500	0.18	+0.1
825,349	-		LRK53_RS03500	0.18	+1.7
825,349	-		LRK53_RS03500	0.18	-0.1
825,349	-		LRK53_RS03500	0.18	-1.0
825,349	-		LRK53_RS03500	0.18	-1.2
825,349	-		LRK53_RS03500	0.18	+1.1
825,349	-		LRK53_RS03500	0.18	-0.6
825,349	-		LRK53_RS03500	0.18	-2.1
825,349	-		LRK53_RS03500	0.18	-1.2
825,349	-		LRK53_RS03500	0.18	-0.5
825,349	-		LRK53_RS03500	0.18	-2.4
825,349	-		LRK53_RS03500	0.18	-3.4
825,349	-		LRK53_RS03500	0.18	-0.6
825,349	-		LRK53_RS03500	0.18	-0.6
825,349	-		LRK53_RS03500	0.18	+0.0
825,349	-		LRK53_RS03500	0.18	+1.5
825,349	-		LRK53_RS03500	0.18	+0.5
825,349	-		LRK53_RS03500	0.18	-0.4
825,349	-		LRK53_RS03500	0.18	-0.2
825,349	-		LRK53_RS03500	0.18	+0.6
825,349	-		LRK53_RS03500	0.18	-0.5
825,349	-		LRK53_RS03500	0.18	-1.5
825,349	-		LRK53_RS03500	0.18	-0.4
825,349	-		LRK53_RS03500	0.18	-0.5
825,349	-		LRK53_RS03500	0.18	+0.3
825,349	-		LRK53_RS03500	0.18	-0.9
825,349	-		LRK53_RS03500	0.18	-1.3
825,492	+		LRK53_RS03500	0.26	+0.1
825,492	+		LRK53_RS03500	0.26	+0.4
825,493	-		LRK53_RS03500	0.26	-1.4
825,493	-		LRK53_RS03500	0.26	-0.8
825,534	+		LRK53_RS03500	0.28	-1.1
825,534	+		LRK53_RS03500	0.28	-1.5
825,534	+		LRK53_RS03500	0.28	-0.5
825,535	-		LRK53_RS03500	0.28	+0.8
825,535	-		LRK53_RS03500	0.28	-0.4
825,535	-		LRK53_RS03500	0.28	-0.2
825,535	-		LRK53_RS03500	0.28	+1.7
825,561	+		LRK53_RS03500	0.30	+0.0
825,562	-		LRK53_RS03500	0.30	-1.3
825,562	-		LRK53_RS03500	0.30	-1.2
825,562	-		LRK53_RS03500	0.30	-0.8
825,612	+		LRK53_RS03500	0.32	-0.1
825,612	+		LRK53_RS03500	0.32	+0.2
825,612	+		LRK53_RS03500	0.32	-0.7
825,612	+		LRK53_RS03500	0.32	-0.6
825,612	+		LRK53_RS03500	0.32	-2.1
825,612	+		LRK53_RS03500	0.32	-0.1
825,612	+		LRK53_RS03500	0.32	-0.1
825,612	+		LRK53_RS03500	0.32	-0.1
825,612	+		LRK53_RS03500	0.32	-1.2
825,613	-		LRK53_RS03500	0.32	-1.3
825,613	-		LRK53_RS03500	0.32	-0.9
825,613	-		LRK53_RS03500	0.32	-1.1
825,613	-		LRK53_RS03500	0.32	+0.9
825,613	-		LRK53_RS03500	0.32	-0.6
825,613	-		LRK53_RS03500	0.32	-0.8
825,613	-		LRK53_RS03500	0.32	-0.7
825,613	-		LRK53_RS03500	0.32	+0.2
825,624	+		LRK53_RS03500	0.33	-2.7
825,625	-		LRK53_RS03500	0.33	-1.3
825,625	-		LRK53_RS03500	0.33	-1.9
825,690	+		LRK53_RS03500	0.37	-1.1
825,690	+		LRK53_RS03500	0.37	-1.1
825,691	-		LRK53_RS03500	0.37	-1.7
825,691	-		LRK53_RS03500	0.37	-0.3