Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00945

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
235,976	+		LRK53_RS00935	0.33	-0.3
235,976	+		LRK53_RS00935	0.33	-1.5
235,977	-		LRK53_RS00935	0.33	-0.9
236,082	-		LRK53_RS00935	0.63	-1.2
236,156	+		LRK53_RS00935	0.84	-1.1
236,156	+		LRK53_RS00935	0.84	-2.3
236,157	-		LRK53_RS00935	0.84	-0.6
236,210	+				-3.0
236,280	+				-0.2
236,280	+				-0.2
236,280	+				-2.5
236,280	+				-0.8
236,280	+				+0.1
236,281	-				+1.1
236,281	-				+1.5
236,281	-				+0.9
236,281	-				-1.5
236,281	-				-0.9
236,281	-				-1.7
236,353	+				+0.2
236,353	+				-0.2
236,353	+				-0.5
236,353	+				-2.8
236,353	+				+1.7
236,354	-				+0.9
236,354	-				-0.3
236,354	-				-0.7
236,354	-				+1.5
236,468	-		LRK53_RS00940	0.53	-2.8
236,506	+		LRK53_RS00940	0.72	+0.1
236,698	-				+0.8
236,698	-				+0.3
236,698	-				-0.0
236,698	-				-1.3
236,750	+				-0.6
236,750	+				+1.0
236,750	+				-1.1
236,750	+				-1.0
236,750	+				-2.6
236,750	+				-0.6
236,750	+				+0.1
236,751	-				-0.0
236,751	-				+2.1
236,751	-				-0.5
236,751	-				+1.4
236,751	-				-1.5
236,751	-				-0.9
236,751	-				+0.1
236,751	-				-0.5
236,751	-				-1.0
236,751	-				+1.5
236,751	-				-1.0
236,751	-				+0.5
236,751	-				-2.3
236,751	-				+1.1
236,899	-				-1.3
236,899	-				+0.8
236,899	-				+0.1
236,916	+				-0.0
236,916	+				-1.7
236,916	+				-1.6
236,916	+				-1.0
236,917	-				-2.5
236,917	-				+1.4
236,917	-				-0.9
236,917	-				+1.7
236,917	-				-2.0
236,943	+				+0.1
236,944	-				+0.7
236,979	-				+0.7
236,979	-				+0.1
236,979	-				-0.8
236,979	-				-1.4
236,979	-				+0.4
236,979	-				-0.5
236,979	-				+0.2
236,979	-				-1.3
237,002	+				+1.6
237,003	-				-0.9
237,003	-				-0.1
237,003	-				-0.9
237,003	-				-1.6
237,003	-				-1.6
237,003	-				-2.4
237,003	-				-1.2
237,003	-				-1.0
237,003	-				-1.0
237,054	-				+0.1
237,054	-				-1.1
237,054	-				-0.3
237,054	-				-1.9
237,054	-				+1.3
237,054	-				+0.1
237,054	-				+0.4
237,054	-				+1.2
237,054	-				-0.6
237,054	-				+1.8
237,054	-				-0.4
237,054	-				-1.0
237,054	-				-1.0
237,112	+		LRK53_RS00945	0.15	+1.3
237,113	-		LRK53_RS00945	0.15	+1.1
237,126	-		LRK53_RS00945	0.16	-1.2
237,126	-		LRK53_RS00945	0.16	+1.3
237,207	-		LRK53_RS00945	0.23	+2.4
237,207	-		LRK53_RS00945	0.23	+2.0
237,207	-		LRK53_RS00945	0.23	-0.2
237,207	-		LRK53_RS00945	0.23	-1.3
237,309	-		LRK53_RS00945	0.33	+0.0
238,067	-				+1.5
238,067	-				-0.3
238,067	-				-0.0
238,067	-				-0.5
238,288	+		LRK53_RS00950	0.84	+0.4
238,288	+		LRK53_RS00950	0.84	-0.5
238,288	+		LRK53_RS00950	0.84	-0.9
238,288	+		LRK53_RS00950	0.84	+0.1
238,288	+		LRK53_RS00950	0.84	-1.2
238,288	+		LRK53_RS00950	0.84	-0.6
238,288	+		LRK53_RS00950	0.84	-0.5
238,288	+		LRK53_RS00950	0.84	-1.3
238,288	+		LRK53_RS00950	0.84	+0.8
238,288	+		LRK53_RS00950	0.84	-0.8
238,288	+		LRK53_RS00950	0.84	-0.5
238,288	+		LRK53_RS00950	0.84	+0.1
238,288	+		LRK53_RS00950	0.84	-1.9
238,289	-		LRK53_RS00950	0.84	-0.2
238,289	-		LRK53_RS00950	0.84	+0.3
238,289	-		LRK53_RS00950	0.84	-0.0
238,289	-		LRK53_RS00950	0.84	-1.6
238,289	-		LRK53_RS00950	0.84	-1.2
238,289	-		LRK53_RS00950	0.84	-1.5
238,289	-		LRK53_RS00950	0.84	+0.4
238,289	-		LRK53_RS00950	0.84	-0.7
238,314	+				+0.7
238,314	+				-0.6
238,315	-				-0.9
238,402	+				+1.2
238,403	-				-2.0
238,403	-				-0.0
238,423	+				-0.2
238,487	-				-0.3
238,487	-				-0.8
238,487	-				-0.8