Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03661

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,097,223	-		MPMX19_03659	0.59	+0.5
1,097,429	+		MPMX19_03659	0.80	-1.5
1,097,429	+		MPMX19_03659	0.80	-2.3
1,097,429	+		MPMX19_03659	0.80	+1.2
1,097,429	+		MPMX19_03659	0.80	-0.3
1,097,429	+		MPMX19_03659	0.80	-0.8
1,097,429	+		MPMX19_03659	0.80	+0.7
1,097,429	+		MPMX19_03659	0.80	-0.4
1,097,429	+		MPMX19_03659	0.80	+0.5
1,097,430	-		MPMX19_03659	0.80	+1.3
1,097,430	-		MPMX19_03659	0.80	-1.0
1,097,430	-		MPMX19_03659	0.80	+0.5
1,097,430	-		MPMX19_03659	0.80	+0.4
1,097,430	-		MPMX19_03659	0.80	-0.2
1,097,430	-		MPMX19_03659	0.80	-0.5
1,097,430	-		MPMX19_03659	0.80	+0.4
1,097,430	-		MPMX19_03659	0.80	-0.2
1,097,430	-		MPMX19_03659	0.80	+1.5
1,097,430	-		MPMX19_03659	0.80	+1.2
1,097,430	-		MPMX19_03659	0.80	+0.8
1,097,430	-		MPMX19_03659	0.80	-1.6
1,097,430	-		MPMX19_03659	0.80	-0.0
1,097,448	-		MPMX19_03659	0.82	+0.9
1,097,448	-		MPMX19_03659	0.82	-0.8
1,097,570	+				-0.1
1,097,570	+				-1.2
1,097,570	+				+0.5
1,097,570	+				-2.2
1,097,570	+				-0.7
1,097,571	-				+0.9
1,097,571	-				-1.0
1,097,571	-				-1.5
1,097,571	-				-0.8
1,097,571	-				+0.1
1,097,588	+				+0.2
1,097,588	+				-0.5
1,097,588	+				-0.7
1,097,588	+				-1.8
1,097,589	-				+0.5
1,097,589	-				-0.6
1,097,589	-				-0.5
1,097,589	-				-1.7
1,097,589	-				-0.6
1,097,589	-				+2.2
1,097,590	+				+1.0
1,097,590	+				-1.5
1,097,590	+				-1.3
1,097,590	+				+1.3
1,097,590	+				+0.8
1,097,590	+				-1.4
1,097,590	+				-1.1
1,097,591	-				-2.3
1,097,591	-				+0.5
1,097,591	-				+1.3
1,097,591	-				-0.2
1,097,591	-				+1.7
1,097,591	-				-2.2
1,097,591	-				-0.6
1,097,591	-				-2.0
1,097,591	-				+0.1
1,097,591	-				+1.1
1,097,591	-				-0.5
1,097,591	-				-2.5
1,097,606	+				-0.1
1,097,607	-				-2.2
1,097,621	+				-0.9
1,097,621	+				+0.8
1,097,621	+				+0.1
1,097,621	+				-0.0
1,097,621	+				-1.0
1,097,622	-				-0.4
1,097,622	-				+1.4
1,097,826	+		MPMX19_03660	0.36	-1.5
1,097,826	+		MPMX19_03660	0.36	-0.6
1,097,826	+		MPMX19_03660	0.36	+0.4
1,097,827	-		MPMX19_03660	0.36	+0.5
1,097,827	-		MPMX19_03660	0.36	-1.0
1,097,827	-		MPMX19_03660	0.36	+0.5
1,097,827	-		MPMX19_03660	0.36	+0.1
1,097,970	+		MPMX19_03660	0.60	-1.4
1,097,970	+		MPMX19_03660	0.60	+0.1
1,097,970	+		MPMX19_03660	0.60	-0.0
1,097,970	+		MPMX19_03660	0.60	-1.0
1,097,970	+		MPMX19_03660	0.60	-1.0
1,097,970	+		MPMX19_03660	0.60	+0.4
1,097,970	+		MPMX19_03660	0.60	+2.2
1,097,970	+		MPMX19_03660	0.60	-1.8
1,097,970	+		MPMX19_03660	0.60	-0.5
1,097,970	+		MPMX19_03660	0.60	-0.0
1,097,970	+		MPMX19_03660	0.60	+1.8
1,097,970	+		MPMX19_03660	0.60	-1.2
1,097,970	+		MPMX19_03660	0.60	+0.8
1,097,970	+		MPMX19_03660	0.60	+0.9
1,097,970	+		MPMX19_03660	0.60	-0.9
1,097,970	+		MPMX19_03660	0.60	-1.2
1,097,970	+		MPMX19_03660	0.60	-0.6
1,097,970	+		MPMX19_03660	0.60	+0.8
1,097,971	-		MPMX19_03660	0.60	-1.2
1,097,971	-		MPMX19_03660	0.60	-1.0
1,097,971	-		MPMX19_03660	0.60	-0.3
1,097,971	-		MPMX19_03660	0.60	-0.4
1,097,971	-		MPMX19_03660	0.60	+0.5
1,097,971	-		MPMX19_03660	0.60	-1.6
1,097,971	-		MPMX19_03660	0.60	-2.2
1,097,971	-		MPMX19_03660	0.60	+0.5
1,097,971	-		MPMX19_03660	0.60	-0.2
1,097,971	-		MPMX19_03660	0.60	+1.3
1,097,971	-		MPMX19_03660	0.60	+0.2
1,097,971	-		MPMX19_03660	0.60	-1.2
1,097,971	-		MPMX19_03660	0.60	-0.7
1,097,971	-		MPMX19_03660	0.60	+0.1
1,097,971	-		MPMX19_03660	0.60	+0.8
1,097,971	-		MPMX19_03660	0.60	-1.7
1,097,971	-		MPMX19_03660	0.60	-0.5
1,097,971	-		MPMX19_03660	0.60	-0.9
1,098,027	+		MPMX19_03660	0.69	-0.9
1,098,027	+		MPMX19_03660	0.69	-0.8
1,098,027	+		MPMX19_03660	0.69	-0.8
1,098,027	+		MPMX19_03660	0.69	+0.1
1,098,028	-		MPMX19_03660	0.69	-1.3
1,098,028	-		MPMX19_03660	0.69	+0.2
1,098,533	+		MPMX19_03661	0.14	+1.1
1,098,533	+		MPMX19_03661	0.14	+0.2
1,098,534	-		MPMX19_03661	0.14	-2.5
1,098,534	-		MPMX19_03661	0.14	+0.5
1,098,534	-		MPMX19_03661	0.14	+0.5
1,098,534	-		MPMX19_03661	0.14	-2.3
1,098,534	-		MPMX19_03661	0.14	+0.5
1,098,534	-		MPMX19_03661	0.14	+0.5
1,098,551	+		MPMX19_03661	0.14	-1.8
1,098,551	+		MPMX19_03661	0.14	+0.5
1,098,552	-		MPMX19_03661	0.15	-2.3
1,098,897	+		MPMX19_03661	0.29	-0.6
1,098,898	-		MPMX19_03661	0.29	-0.0
1,098,898	-		MPMX19_03661	0.29	-0.7
1,098,898	-		MPMX19_03661	0.29	-0.2
1,098,898	-		MPMX19_03661	0.29	+0.1
1,098,898	-		MPMX19_03661	0.29	-0.5
1,099,013	+		MPMX19_03661	0.34	-0.8
1,099,013	+		MPMX19_03661	0.34	-0.2
1,099,160	+		MPMX19_03661	0.40	-1.9
1,099,169	+		MPMX19_03661	0.41	-0.5
1,099,169	+		MPMX19_03661	0.41	+0.7
1,099,169	+		MPMX19_03661	0.41	+0.6
1,099,169	+		MPMX19_03661	0.41	-0.9
1,099,169	+		MPMX19_03661	0.41	-1.4
1,099,169	+		MPMX19_03661	0.41	-0.2
1,099,169	+		MPMX19_03661	0.41	+0.4
1,099,169	+		MPMX19_03661	0.41	+0.2
1,099,169	+		MPMX19_03661	0.41	-0.8
1,099,169	+		MPMX19_03661	0.41	-0.4
1,099,169	+		MPMX19_03661	0.41	-0.9
1,099,170	-		MPMX19_03661	0.41	+0.8
1,099,170	-		MPMX19_03661	0.41	-1.0
1,099,170	-		MPMX19_03661	0.41	+0.4
1,099,170	-		MPMX19_03661	0.41	+1.1
1,099,170	-		MPMX19_03661	0.41	+0.2
1,099,170	-		MPMX19_03661	0.41	-2.3
1,099,170	-		MPMX19_03661	0.41	+0.3
1,099,170	-		MPMX19_03661	0.41	-2.1
1,099,170	-		MPMX19_03661	0.41	-0.4
1,099,170	-		MPMX19_03661	0.41	+0.4
1,099,170	-		MPMX19_03661	0.41	-0.8
1,099,170	-		MPMX19_03661	0.41	+2.5
1,099,170	-		MPMX19_03661	0.41	+0.1
1,099,392	-		MPMX19_03661	0.50	-0.6
1,099,392	-		MPMX19_03661	0.50	+0.1
1,099,392	-		MPMX19_03661	0.50	-0.2
1,099,508	+		MPMX19_03661	0.55	-1.7
1,099,727	+		MPMX19_03661	0.64	-0.5
1,099,727	+		MPMX19_03661	0.64	-0.1
1,100,105	+		MPMX19_03661	0.80	+0.1
1,100,105	+		MPMX19_03661	0.80	-0.6
1,100,106	-		MPMX19_03661	0.80	-0.0
1,100,106	-		MPMX19_03661	0.80	+0.7
1,100,106	-		MPMX19_03661	0.80	-1.3
1,100,110	+		MPMX19_03661	0.80	-0.2
1,100,110	+		MPMX19_03661	0.80	+1.5
1,100,110	+		MPMX19_03661	0.80	+0.5
1,100,110	+		MPMX19_03661	0.80	-1.8
1,100,110	+		MPMX19_03661	0.80	+0.1
1,100,111	-		MPMX19_03661	0.80	-2.3
1,100,111	-		MPMX19_03661	0.80	+1.7
1,100,111	-		MPMX19_03661	0.80	+0.5
1,100,111	-		MPMX19_03661	0.80	-0.8
1,100,111	-		MPMX19_03661	0.80	+1.4
1,100,111	-		MPMX19_03661	0.80	-0.7
1,100,111	-		MPMX19_03661	0.80	-1.0
1,100,111	-		MPMX19_03661	0.80	+1.3
1,100,111	-		MPMX19_03661	0.80	-0.5
1,100,114	+		MPMX19_03661	0.81	+0.7
1,100,114	+		MPMX19_03661	0.81	+0.4
1,100,114	+		MPMX19_03661	0.81	+0.8
1,100,114	+		MPMX19_03661	0.81	-1.0
1,100,214	+		MPMX19_03661	0.85	-1.3
1,100,330	+		MPMX19_03661	0.90	-1.8
1,100,330	+		MPMX19_03661	0.90	-0.3
1,100,330	+		MPMX19_03661	0.90	+0.2
1,100,330	+		MPMX19_03661	0.90	-0.8
1,100,330	+		MPMX19_03661	0.90	-0.5
1,100,330	+		MPMX19_03661	0.90	-0.1
1,100,330	+		MPMX19_03661	0.90	-1.8
1,100,330	+		MPMX19_03661	0.90	+0.4
1,100,330	+		MPMX19_03661	0.90	-0.7
1,100,331	-		MPMX19_03661	0.90	-0.3
1,100,331	-		MPMX19_03661	0.90	-0.3
1,100,331	-		MPMX19_03661	0.90	-0.3
1,100,331	-		MPMX19_03661	0.90	+0.8
1,100,331	-		MPMX19_03661	0.90	-0.5
1,100,331	-		MPMX19_03661	0.90	-0.5
1,100,948	+		MPMX19_03662	0.47	+0.1
1,100,948	+		MPMX19_03662	0.47	+1.1
1,100,948	+		MPMX19_03662	0.47	-2.8
1,101,165	+		MPMX19_03662	0.74	+0.1
1,101,415	+				-2.0
1,101,415	+				-0.0
1,101,442	+				+0.5
1,101,442	+				-1.5
1,101,442	+				-0.5
1,101,442	+				-1.5
1,101,443	-				-1.0