Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02205

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,306,866	+		MPMX19_02204	0.26	-2.4
2,306,866	+		MPMX19_02204	0.26	-0.2
2,306,866	+		MPMX19_02204	0.26	-1.7
2,306,866	+		MPMX19_02204	0.26	-2.4
2,306,866	+		MPMX19_02204	0.26	-0.7
2,306,866	+		MPMX19_02204	0.26	+0.8
2,306,866	+		MPMX19_02204	0.26	-1.0
2,306,866	+		MPMX19_02204	0.26	-0.4
2,306,866	+		MPMX19_02204	0.26	-0.4
2,306,867	-		MPMX19_02204	0.26	+0.0
2,306,867	-		MPMX19_02204	0.26	-0.8
2,306,867	-		MPMX19_02204	0.26	-0.1
2,306,867	-		MPMX19_02204	0.26	+0.6
2,306,867	-		MPMX19_02204	0.26	+0.4
2,306,914	+		MPMX19_02204	0.30	+0.2
2,306,914	+		MPMX19_02204	0.30	-0.4
2,306,914	+		MPMX19_02204	0.30	+0.2
2,306,914	+		MPMX19_02204	0.30	+0.6
2,306,914	+		MPMX19_02204	0.30	-2.4
2,306,914	+		MPMX19_02204	0.30	-1.4
2,306,914	+		MPMX19_02204	0.30	-0.3
2,306,915	-		MPMX19_02204	0.30	+0.2
2,306,915	-		MPMX19_02204	0.30	-0.4
2,306,915	-		MPMX19_02204	0.30	-0.5
2,306,915	-		MPMX19_02204	0.30	+0.0
2,306,915	-		MPMX19_02204	0.30	-1.1
2,306,933	+		MPMX19_02204	0.32	-0.9
2,306,933	+		MPMX19_02204	0.32	-0.4
2,306,933	+		MPMX19_02204	0.32	-0.1
2,306,933	+		MPMX19_02204	0.32	-0.5
2,306,933	+		MPMX19_02204	0.32	-2.9
2,306,933	+		MPMX19_02204	0.32	-0.4
2,306,933	+		MPMX19_02204	0.32	+0.7
2,306,933	+		MPMX19_02204	0.32	+0.1
2,306,933	+		MPMX19_02204	0.32	+1.0
2,306,933	+		MPMX19_02204	0.32	-0.2
2,306,933	+		MPMX19_02204	0.32	+0.4
2,306,934	-		MPMX19_02204	0.32	-0.7
2,306,934	-		MPMX19_02204	0.32	-0.8
2,306,934	-		MPMX19_02204	0.32	-0.3
2,306,934	-		MPMX19_02204	0.32	-0.2
2,306,934	-		MPMX19_02204	0.32	+1.6
2,306,934	-		MPMX19_02204	0.32	-1.8
2,306,934	-		MPMX19_02204	0.32	+0.4
2,306,934	-		MPMX19_02204	0.32	-1.0
2,306,934	-		MPMX19_02204	0.32	-0.5
2,306,934	-		MPMX19_02204	0.32	-0.5
2,306,934	-		MPMX19_02204	0.32	-0.4
2,306,934	-		MPMX19_02204	0.32	-0.4
2,306,934	-		MPMX19_02204	0.32	+0.9
2,306,995	+		MPMX19_02204	0.37	+0.0
2,306,995	+		MPMX19_02204	0.37	+1.0
2,306,996	-		MPMX19_02204	0.37	-0.4
2,306,996	-		MPMX19_02204	0.37	-1.4
2,306,996	-		MPMX19_02204	0.37	-1.0
2,306,996	-		MPMX19_02204	0.37	-1.2
2,307,005	-		MPMX19_02204	0.38	-1.5
2,307,005	-		MPMX19_02204	0.38	+0.2
2,307,005	-		MPMX19_02204	0.38	-1.1
2,307,163	+		MPMX19_02204	0.52	-1.2
2,307,163	+		MPMX19_02204	0.52	-1.0
2,307,163	+		MPMX19_02204	0.52	-0.8
2,307,163	+		MPMX19_02204	0.52	-1.2
2,307,163	+		MPMX19_02204	0.52	-1.8
2,307,164	-		MPMX19_02204	0.52	+0.1
2,307,164	-		MPMX19_02204	0.52	-0.3
2,307,164	-		MPMX19_02204	0.52	+0.3
2,307,164	-		MPMX19_02204	0.52	-0.2
2,307,337	+		MPMX19_02204	0.67	+0.8
2,307,337	+		MPMX19_02204	0.67	-1.4
2,307,337	+		MPMX19_02204	0.67	+0.8
2,307,337	+		MPMX19_02204	0.67	-1.0
2,307,337	+		MPMX19_02204	0.67	-0.9
2,307,337	+		MPMX19_02204	0.67	+0.5
2,307,337	+		MPMX19_02204	0.67	+0.7
2,307,472	+		MPMX19_02204	0.79	+1.5
2,307,472	+		MPMX19_02204	0.79	+1.0
2,307,472	+		MPMX19_02204	0.79	-0.2
2,307,472	+		MPMX19_02204	0.79	+0.3
2,307,472	+		MPMX19_02204	0.79	+0.3
2,307,472	+		MPMX19_02204	0.79	-1.5
2,307,473	-		MPMX19_02204	0.80	+2.4
2,307,473	-		MPMX19_02204	0.80	+0.2
2,307,473	-		MPMX19_02204	0.80	-0.0
2,307,473	-		MPMX19_02204	0.80	-0.5
2,307,473	-		MPMX19_02204	0.80	+0.2
2,307,601	+				-0.0
2,307,601	+				-0.8
2,307,602	-				-1.1
2,307,602	-				+0.9
2,307,806	+				-1.0
2,307,806	+				-0.5
2,307,806	+				-2.0
2,307,806	+				-0.8
2,307,806	+				-2.0
2,307,806	+				+0.1
2,307,806	+				-0.8
2,307,806	+				-0.9
2,307,806	+				+0.0
2,307,806	+				-1.0
2,307,806	+				-0.7
2,307,806	+				+0.0
2,307,806	+				+0.3
2,307,806	+				+0.2
2,307,806	+				+0.1
2,307,806	+				+0.2
2,307,806	+				+0.0
2,307,806	+				-0.7
2,307,806	+				-0.3
2,307,806	+				-0.8
2,307,806	+				-1.8
2,307,806	+				+0.6
2,307,806	+				+0.6
2,307,807	-				-1.8
2,307,807	-				-0.6
2,307,807	-				-1.4
2,307,807	-				-0.1
2,307,807	-				+0.5
2,307,807	-				-2.3
2,307,807	-				-0.7
2,307,807	-				+0.0
2,307,807	-				-0.6
2,307,807	-				-0.1
2,307,807	-				+0.7
2,307,807	-				-0.4
2,307,807	-				+0.0
2,307,807	-				-0.4
2,307,807	-				-0.9
2,307,807	-				-0.4
2,307,807	-				-0.6
2,307,807	-				+0.3
2,307,807	-				-3.0
2,307,807	-				-0.3
2,307,857	+				+0.2
2,307,857	+				+0.2
2,307,857	+				-1.1
2,307,857	+				-0.3
2,307,857	+				-0.5
2,307,857	+				+0.9
2,307,857	+				-0.2
2,307,857	+				+0.9
2,307,857	+				-1.1
2,307,857	+				-0.2
2,307,857	+				+1.3
2,307,857	+				+0.6
2,307,857	+				-0.3
2,307,857	+				-0.2
2,307,857	+				+1.1
2,307,857	+				+0.2
2,307,857	+				+0.3
2,307,858	-				+0.2
2,307,858	-				+0.5
2,307,858	-				-0.3
2,307,858	-				+0.6
2,307,858	-				+0.4
2,307,858	-				-1.4
2,307,858	-				+0.2
2,307,858	-				-0.2
2,307,858	-				-1.7
2,308,097	+		MPMX19_02205	0.45	-1.8
2,308,097	+		MPMX19_02205	0.45	-2.9
2,308,097	+		MPMX19_02205	0.45	-1.0
2,308,097	+		MPMX19_02205	0.45	+0.3
2,308,097	+		MPMX19_02205	0.45	-2.2
2,308,097	+		MPMX19_02205	0.45	-0.5
2,308,097	+		MPMX19_02205	0.45	+1.2
2,308,097	+		MPMX19_02205	0.45	+0.9
2,308,098	-		MPMX19_02205	0.45	-1.1
2,308,098	-		MPMX19_02205	0.45	-0.4
2,308,098	-		MPMX19_02205	0.45	-0.5
2,308,098	-		MPMX19_02205	0.45	+0.5
2,308,098	-		MPMX19_02205	0.45	+0.2
2,308,098	-		MPMX19_02205	0.45	-0.7
2,308,098	-		MPMX19_02205	0.45	+0.5
2,308,098	-		MPMX19_02205	0.45	+0.0
2,308,098	-		MPMX19_02205	0.45	-0.7
2,308,130	+		MPMX19_02205	0.50	+1.3
2,308,131	-		MPMX19_02205	0.50	-1.3
2,308,140	+		MPMX19_02205	0.51	+0.5
2,308,141	-		MPMX19_02205	0.52	+1.4
2,308,234	+		MPMX19_02205	0.66	-2.0
2,308,234	+		MPMX19_02205	0.66	-0.2
2,308,234	+		MPMX19_02205	0.66	-0.5
2,308,234	+		MPMX19_02205	0.66	-1.2
2,308,234	+		MPMX19_02205	0.66	-0.1
2,308,234	+		MPMX19_02205	0.66	+0.4
2,308,234	+		MPMX19_02205	0.66	+1.1
2,308,235	-		MPMX19_02205	0.66	-2.0
2,308,235	-		MPMX19_02205	0.66	-0.8
2,308,235	-		MPMX19_02205	0.66	-0.1
2,308,235	-		MPMX19_02205	0.66	-0.3
2,308,235	-		MPMX19_02205	0.66	-1.1
2,308,235	-		MPMX19_02205	0.66	-1.7
2,308,235	-		MPMX19_02205	0.66	-0.8
2,308,235	-		MPMX19_02205	0.66	+1.0
2,308,235	-		MPMX19_02205	0.66	-0.1
2,308,313	+		MPMX19_02205	0.78	-0.9
2,308,313	+		MPMX19_02205	0.78	-1.3
2,308,313	+		MPMX19_02205	0.78	-0.8
2,308,313	+		MPMX19_02205	0.78	-0.2
2,308,314	-		MPMX19_02205	0.78	+0.6
2,308,383	+		MPMX19_02205	0.89	-1.5
2,308,383	+		MPMX19_02205	0.89	-1.1
2,308,383	+		MPMX19_02205	0.89	-1.2
2,308,383	+		MPMX19_02205	0.89	-1.3
2,308,383	+		MPMX19_02205	0.89	-2.8
2,308,383	+		MPMX19_02205	0.89	-1.0
2,308,383	+		MPMX19_02205	0.89	-1.0
2,308,383	+		MPMX19_02205	0.89	-0.4
2,308,383	+		MPMX19_02205	0.89	-0.4
2,308,383	+		MPMX19_02205	0.89	-1.2
2,308,383	+		MPMX19_02205	0.89	-1.2
2,308,384	-		MPMX19_02205	0.89	-0.2
2,308,384	-		MPMX19_02205	0.89	-0.4
2,308,384	-		MPMX19_02205	0.89	-1.2
2,308,384	-		MPMX19_02205	0.89	-1.5
2,308,384	-		MPMX19_02205	0.89	+0.3
2,308,384	-		MPMX19_02205	0.89	+0.5
2,308,384	-		MPMX19_02205	0.89	+0.3
2,308,478	+				-0.9
2,308,479	+				-0.2
2,308,479	+				-0.5
2,308,479	+				+0.6
2,308,479	+				-1.3
2,308,479	+				+0.0
2,308,480	-				+1.6
2,308,480	-				+0.9
2,308,480	-				+0.2
2,308,480	-				-0.2
2,308,480	-				+0.5
2,308,480	-				-2.1
2,308,486	-				-1.7
2,308,496	+				+0.5
2,308,496	+				+0.6
2,308,496	+				-1.0
2,308,496	+				-0.1
2,308,497	-				-0.5
2,308,497	-				-1.0
2,308,497	-				-2.1
2,308,659	+		MPMX19_02206	0.10	-0.8
2,308,660	-		MPMX19_02206	0.10	+0.2
2,308,660	-		MPMX19_02206	0.10	-0.3
2,308,660	-		MPMX19_02206	0.10	+0.3
2,308,660	-		MPMX19_02206	0.10	+0.3
2,308,660	-		MPMX19_02206	0.10	+1.1
2,308,660	-		MPMX19_02206	0.10	-0.4
2,308,660	-		MPMX19_02206	0.10	-1.2
2,308,660	-		MPMX19_02206	0.10	-1.8
2,308,660	-		MPMX19_02206	0.10	-0.2
2,308,815	+		MPMX19_02206	0.28	-0.3
2,308,815	+		MPMX19_02206	0.28	-1.0
2,308,815	+		MPMX19_02206	0.28	+0.4
2,308,815	+		MPMX19_02206	0.28	+0.0
2,308,815	+		MPMX19_02206	0.28	-0.5
2,308,815	+		MPMX19_02206	0.28	-1.7
2,308,815	+		MPMX19_02206	0.28	-1.3
2,308,815	+		MPMX19_02206	0.28	-0.5
2,308,815	+		MPMX19_02206	0.28	-1.2
2,308,815	+		MPMX19_02206	0.28	-0.7
2,308,816	-		MPMX19_02206	0.28	+1.1
2,308,816	-		MPMX19_02206	0.28	-0.3
2,308,816	-		MPMX19_02206	0.28	-2.2
2,308,816	-		MPMX19_02206	0.28	-0.6
2,308,816	-		MPMX19_02206	0.28	+0.8
2,308,816	-		MPMX19_02206	0.28	-1.5
2,308,816	-		MPMX19_02206	0.28	-0.3
2,308,816	-		MPMX19_02206	0.28	-1.7
2,308,816	-		MPMX19_02206	0.28	-0.4
2,308,816	-		MPMX19_02206	0.28	-0.2
2,308,816	-		MPMX19_02206	0.28	-0.3
2,308,956	+		MPMX19_02206	0.43	-0.8
2,308,956	+		MPMX19_02206	0.43	+0.2
2,308,956	+		MPMX19_02206	0.43	-1.0
2,308,956	+		MPMX19_02206	0.43	-0.9
2,308,956	+		MPMX19_02206	0.43	-0.8
2,308,956	+		MPMX19_02206	0.43	-0.4
2,308,956	+		MPMX19_02206	0.43	-0.2
2,308,956	+		MPMX19_02206	0.43	+0.5
2,308,956	+		MPMX19_02206	0.43	+1.0
2,308,957	-		MPMX19_02206	0.43	-3.5
2,308,957	-		MPMX19_02206	0.43	-0.1
2,308,957	-		MPMX19_02206	0.43	-0.2
2,308,957	-		MPMX19_02206	0.43	-0.5
2,308,957	-		MPMX19_02206	0.43	+1.6
2,308,957	-		MPMX19_02206	0.43	-0.7
2,309,181	+		MPMX19_02206	0.68	-1.3
2,309,181	+		MPMX19_02206	0.68	+1.3
2,309,181	+		MPMX19_02206	0.68	+0.9
2,309,181	+		MPMX19_02206	0.68	+0.4
2,309,181	+		MPMX19_02206	0.68	+0.3
2,309,181	+		MPMX19_02206	0.68	+0.8
2,309,181	+		MPMX19_02206	0.68	-1.2
2,309,181	+		MPMX19_02206	0.68	-0.4
2,309,181	+		MPMX19_02206	0.68	+0.2
2,309,181	+		MPMX19_02206	0.68	-1.4
2,309,182	-		MPMX19_02206	0.68	-1.0
2,309,182	-		MPMX19_02206	0.68	-0.4
2,309,182	-		MPMX19_02206	0.68	+0.0
2,309,376	+		MPMX19_02206	0.89	-0.4