Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02040

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,132,895	+		MPMX19_02038	0.89	-0.8
2,132,895	+		MPMX19_02038	0.89	-1.0
2,132,895	+		MPMX19_02038	0.89	-0.4
2,132,895	+		MPMX19_02038	0.89	-0.9
2,132,895	+		MPMX19_02038	0.89	+0.5
2,132,896	-		MPMX19_02038	0.89	-0.2
2,132,896	-		MPMX19_02038	0.89	-0.7
2,132,896	-		MPMX19_02038	0.89	+1.0
2,132,896	-		MPMX19_02038	0.89	+0.4
2,132,896	-		MPMX19_02038	0.89	-0.4
2,132,896	-		MPMX19_02038	0.89	-2.5
2,132,896	-		MPMX19_02038	0.89	-2.3
2,132,896	-		MPMX19_02038	0.89	-1.2
2,132,896	-		MPMX19_02038	0.89	-0.7
2,132,949	+				+1.3
2,132,949	+				-0.8
2,132,949	+				-1.0
2,132,949	+				-2.3
2,132,950	-				-0.6
2,132,950	-				-0.2
2,133,021	+				-0.6
2,133,021	+				-0.3
2,133,021	+				-1.4
2,133,021	+				-0.4
2,133,021	+				+1.1
2,133,021	+				+0.1
2,133,021	+				+2.8
2,133,021	+				-0.8
2,133,021	+				+0.6
2,133,021	+				-1.3
2,133,021	+				+1.0
2,133,022	-				-1.4
2,133,022	-				-0.8
2,133,022	-				+0.2
2,133,022	-				-0.8
2,133,022	-				+0.5
2,133,022	-				-2.0
2,133,022	-				-0.5
2,133,022	-				-0.8
2,133,022	-				+0.8
2,133,022	-				+0.2
2,133,022	-				-2.4
2,133,022	-				+0.5
2,133,022	-				-1.3
2,133,022	-				-1.0
2,133,022	-				+0.5
2,133,022	-				-0.6
2,133,033	+				+0.3
2,133,033	+				-1.0
2,133,033	+				-0.8
2,133,034	-				-0.5
2,133,034	-				-0.5
2,133,034	-				+0.7
2,133,034	-				-1.6
2,133,298	+				+0.1
2,133,433	+				-0.5
2,133,433	+				-0.8
2,133,433	+				+0.5
2,133,434	-				-0.0
2,133,434	-				+0.5
2,133,434	-				-0.4
2,133,444	+				-0.1
2,133,444	+				-1.0
2,133,445	-				-1.4
2,133,459	+				-0.1
2,133,459	+				-0.8
2,133,459	+				-0.5
2,133,459	+				-0.2
2,133,459	+				-0.0
2,133,459	+				-1.8
2,133,459	+				+0.0
2,133,459	+				+0.1
2,133,459	+				-1.5
2,133,459	+				-2.5
2,133,459	+				-1.0
2,133,460	-				-0.6
2,133,460	-				-0.2
2,133,460	-				+0.9
2,133,460	-				-1.7
2,133,460	-				-0.9
2,133,460	-				+0.9
2,133,460	-				+0.8
2,133,460	-				-1.0
2,133,460	-				-0.5
2,133,460	-				+0.3
2,133,460	-				-1.0
2,133,460	-				+0.3
2,133,460	-				+1.1
2,133,460	-				-0.6
2,133,461	+				-1.0
2,133,461	+				-0.0
2,133,461	+				-0.6
2,133,461	+				-1.9
2,133,461	+				-1.3
2,133,461	+				-0.5
2,133,461	+				-2.5
2,133,462	-				-1.8
2,133,462	-				-1.9
2,133,462	-				-1.4
2,133,462	-				-0.6
2,133,462	-				-0.6
2,133,462	-				-1.2
2,133,462	-				-1.3
2,133,462	-				-0.5
2,133,462	-				-1.2
2,133,462	-				-1.8
2,133,462	-				-2.2
2,133,462	-				-0.6
2,133,462	-				-0.2
2,133,462	-				+1.1
2,133,462	-				+0.3
2,133,462	-				+0.5
2,133,462	-				-0.6
2,133,475	+				-1.5
2,133,475	+				-1.0
2,133,475	+				-1.0
2,133,475	+				-0.8
2,133,476	-				-0.5
2,133,476	-				+0.9
2,133,476	-				-1.8
2,133,476	-				+0.5
2,133,617	+		MPMX19_02039	0.49	-1.2
2,133,617	+		MPMX19_02039	0.49	-0.3
2,133,617	+		MPMX19_02039	0.49	-0.5
2,133,617	+		MPMX19_02039	0.49	-0.5
2,133,617	+		MPMX19_02039	0.49	-1.1
2,133,617	+		MPMX19_02039	0.49	-0.3
2,133,618	-		MPMX19_02039	0.49	-1.5
2,133,618	-		MPMX19_02039	0.49	+0.1
2,133,618	-		MPMX19_02039	0.49	+1.2
2,133,618	-		MPMX19_02039	0.49	+0.4
2,133,618	-		MPMX19_02039	0.49	-0.5
2,133,729	+				-0.8
2,133,729	+				-1.0
2,133,729	+				+0.2
2,133,729	+				-0.9
2,133,730	-				-1.6
2,133,730	-				-0.5
2,133,730	-				-0.6
2,133,730	-				-1.4
2,134,008	+		MPMX19_02040	0.52	-1.9
2,134,008	+		MPMX19_02040	0.52	-1.4
2,134,008	+		MPMX19_02040	0.52	-0.3
2,134,008	+		MPMX19_02040	0.52	-1.9
2,134,008	+		MPMX19_02040	0.52	-1.2
2,134,008	+		MPMX19_02040	0.52	-0.9
2,134,008	+		MPMX19_02040	0.52	+0.3
2,134,008	+		MPMX19_02040	0.52	-0.5
2,134,008	+		MPMX19_02040	0.52	-1.3
2,134,008	+		MPMX19_02040	0.52	-0.2
2,134,008	+		MPMX19_02040	0.52	-0.6
2,134,008	+		MPMX19_02040	0.52	+0.0
2,134,008	+		MPMX19_02040	0.52	+0.7
2,134,008	+		MPMX19_02040	0.52	-1.1
2,134,008	+		MPMX19_02040	0.52	+1.2
2,134,008	+		MPMX19_02040	0.52	+1.3
2,134,008	+		MPMX19_02040	0.52	+0.8
2,134,008	+		MPMX19_02040	0.52	-0.3
2,134,008	+		MPMX19_02040	0.52	-1.0
2,134,008	+		MPMX19_02040	0.52	-0.5
2,134,008	+		MPMX19_02040	0.52	-1.8
2,134,008	+		MPMX19_02040	0.52	-0.0
2,134,008	+		MPMX19_02040	0.52	+1.3
2,134,008	+		MPMX19_02040	0.52	-0.0
2,134,009	-		MPMX19_02040	0.52	-0.5
2,134,009	-		MPMX19_02040	0.52	+0.1
2,134,009	-		MPMX19_02040	0.52	-0.5
2,134,009	-		MPMX19_02040	0.52	-0.6
2,134,009	-		MPMX19_02040	0.52	+0.0
2,134,009	-		MPMX19_02040	0.52	-0.9
2,134,009	-		MPMX19_02040	0.52	-0.2
2,134,009	-		MPMX19_02040	0.52	+0.1
2,134,009	-		MPMX19_02040	0.52	-1.0
2,134,009	-		MPMX19_02040	0.52	-1.6
2,134,009	-		MPMX19_02040	0.52	-1.5
2,134,009	-		MPMX19_02040	0.52	+0.8
2,134,009	-		MPMX19_02040	0.52	-1.9
2,134,009	-		MPMX19_02040	0.52	-0.8
2,134,009	-		MPMX19_02040	0.52	-0.7
2,134,009	-		MPMX19_02040	0.52	-0.8
2,134,009	-		MPMX19_02040	0.52	-0.4
2,134,009	-		MPMX19_02040	0.52	-0.0
2,134,009	-		MPMX19_02040	0.52	-1.1
2,134,009	-		MPMX19_02040	0.52	+1.8
2,134,009	-		MPMX19_02040	0.52	+1.1
2,134,009	-		MPMX19_02040	0.52	-0.5
2,134,009	-		MPMX19_02040	0.52	-0.0
2,134,009	-		MPMX19_02040	0.52	-1.9
2,134,009	-		MPMX19_02040	0.52	+0.1
2,134,009	-		MPMX19_02040	0.52	-1.3
2,134,009	-		MPMX19_02040	0.52	+0.4
2,134,009	-		MPMX19_02040	0.52	+0.8
2,134,062	+		MPMX19_02040	0.65	+0.1
2,134,062	+		MPMX19_02040	0.65	-0.8
2,134,062	+		MPMX19_02040	0.65	-1.1
2,134,062	+		MPMX19_02040	0.65	-1.0
2,134,062	+		MPMX19_02040	0.65	+0.3
2,134,062	+		MPMX19_02040	0.65	-0.7
2,134,062	+		MPMX19_02040	0.65	-0.5
2,134,062	+		MPMX19_02040	0.65	-1.3
2,134,062	+		MPMX19_02040	0.65	+0.5
2,134,062	+		MPMX19_02040	0.65	+0.9
2,134,062	+		MPMX19_02040	0.65	-2.5
2,134,063	-		MPMX19_02040	0.65	-1.5
2,134,063	-		MPMX19_02040	0.65	+0.4
2,134,063	-		MPMX19_02040	0.65	+0.3
2,134,063	-		MPMX19_02040	0.65	+0.4
2,134,063	-		MPMX19_02040	0.65	-1.0
2,134,063	-		MPMX19_02040	0.65	-1.0
2,134,063	-		MPMX19_02040	0.65	+1.5
2,134,063	-		MPMX19_02040	0.65	+1.4
2,134,063	-		MPMX19_02040	0.65	-0.5
2,134,063	-		MPMX19_02040	0.65	-2.2
2,134,063	-		MPMX19_02040	0.65	-0.2
2,134,063	-		MPMX19_02040	0.65	-0.7
2,134,063	-		MPMX19_02040	0.65	+0.1
2,134,063	-		MPMX19_02040	0.65	-0.9
2,134,063	-		MPMX19_02040	0.65	-0.6
2,134,063	-		MPMX19_02040	0.65	-0.8
2,134,063	-		MPMX19_02040	0.65	+0.4
2,134,063	-		MPMX19_02040	0.65	-1.3
2,134,063	-		MPMX19_02040	0.65	+0.3
2,134,117	-		MPMX19_02040	0.78	-0.9
2,134,117	-		MPMX19_02040	0.78	+0.4
2,134,173	+				-0.2
2,134,173	+				+0.1
2,134,173	+				-1.3
2,134,173	+				+0.5
2,134,173	+				-1.2
2,134,174	-				+0.7
2,134,203	+				+1.5
2,134,203	+				-1.5
2,134,203	+				-1.5
2,134,204	-				-2.0
2,134,204	-				+0.5
2,134,204	-				+0.3
2,134,241	+				-0.6
2,134,242	-				+1.1
2,134,295	+		MPMX19_02041	0.24	-1.3
2,134,295	+		MPMX19_02041	0.24	-0.0
2,134,295	+		MPMX19_02041	0.24	-2.0
2,134,296	-		MPMX19_02041	0.24	-0.3
2,134,296	-		MPMX19_02041	0.24	-1.7
2,134,434	-		MPMX19_02041	0.72	-1.2
2,134,434	-		MPMX19_02041	0.72	+0.9
2,134,449	+		MPMX19_02041	0.78	-0.8
2,134,450	-		MPMX19_02041	0.78	+1.1
2,134,547	+				+0.8
2,134,547	+				-0.0
2,134,548	-				-1.2
2,134,548	-				+1.2
2,134,548	-				+0.2
2,134,706	+				-0.3
2,134,706	+				-0.9
2,134,706	+				-0.7
2,134,707	-				-0.2
2,134,707	-				+0.8
2,134,934	+		MPMX19_02042	0.45	-1.0
2,134,934	+		MPMX19_02042	0.45	+1.0
2,134,934	+		MPMX19_02042	0.45	+0.5
2,134,934	+		MPMX19_02042	0.45	-0.0
2,134,934	+		MPMX19_02042	0.45	+0.7
2,134,935	-		MPMX19_02042	0.45	-0.5
2,134,935	-		MPMX19_02042	0.45	+0.4
2,134,935	-		MPMX19_02042	0.45	+0.5
2,134,961	+		MPMX19_02042	0.49	-1.0
2,134,961	+		MPMX19_02042	0.49	+0.2
2,134,961	+		MPMX19_02042	0.49	-2.8
2,134,961	+		MPMX19_02042	0.49	-0.9
2,134,961	+		MPMX19_02042	0.49	-0.5
2,134,961	+		MPMX19_02042	0.49	-1.3
2,134,961	+		MPMX19_02042	0.49	-2.3
2,134,961	+		MPMX19_02042	0.49	-1.0
2,134,961	+		MPMX19_02042	0.49	-0.5
2,134,962	-		MPMX19_02042	0.49	-1.6
2,134,962	-		MPMX19_02042	0.49	-0.8
2,134,962	-		MPMX19_02042	0.49	-0.4
2,134,962	-		MPMX19_02042	0.49	-0.0
2,134,962	-		MPMX19_02042	0.49	-1.5
2,134,962	-		MPMX19_02042	0.49	-0.0
2,134,962	-		MPMX19_02042	0.49	-1.0
2,134,974	+		MPMX19_02042	0.51	-1.8
2,134,974	+		MPMX19_02042	0.51	+2.1
2,134,974	+		MPMX19_02042	0.51	-2.4
2,134,974	+		MPMX19_02042	0.51	-0.5
2,134,974	+		MPMX19_02042	0.51	-1.2
2,134,975	-		MPMX19_02042	0.51	-1.6