Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01906

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,990,554	-				+0.3
1,990,554	-				-1.5
1,990,716	+				-1.1
1,990,716	+				-1.3
1,990,716	+				-1.0
1,990,716	+				-0.4
1,990,717	-				-2.2
1,990,717	-				-0.3
1,990,718	+				-0.3
1,990,718	+				-0.2
1,990,718	+				+0.2
1,990,718	+				-0.8
1,990,718	+				-1.1
1,990,718	+				-2.7
1,990,719	-				-1.3
1,990,719	-				-0.5
1,990,719	-				-0.8
1,990,719	-				-2.3
1,990,719	-				-0.8
1,990,719	-				-0.3
1,990,719	-				+0.6
1,990,719	-				-1.5
1,990,793	+				-0.4
1,990,793	+				+0.3
1,990,794	-				-1.8
1,990,794	-				-0.2
1,990,794	-				-1.1
1,990,794	-				-0.1
1,990,794	-				+0.3
1,991,250	+		MPMX19_01905	0.79	+0.8
1,991,250	+		MPMX19_01905	0.79	-1.6
1,991,250	+		MPMX19_01905	0.79	+0.3
1,991,250	+		MPMX19_01905	0.79	+0.8
1,991,250	+		MPMX19_01905	0.79	-0.9
1,991,250	+		MPMX19_01905	0.79	-2.4
1,991,250	+		MPMX19_01905	0.79	+0.5
1,991,250	+		MPMX19_01905	0.79	+0.9
1,991,250	+		MPMX19_01905	0.79	+1.4
1,991,250	+		MPMX19_01905	0.79	-0.2
1,991,250	+		MPMX19_01905	0.79	+1.2
1,991,250	+		MPMX19_01905	0.79	-1.1
1,991,250	+		MPMX19_01905	0.79	-0.7
1,991,250	+		MPMX19_01905	0.79	+0.7
1,991,250	+		MPMX19_01905	0.79	+1.0
1,991,250	+		MPMX19_01905	0.79	+0.7
1,991,250	+		MPMX19_01905	0.79	-0.5
1,991,250	+		MPMX19_01905	0.79	+0.9
1,991,250	+		MPMX19_01905	0.79	+0.7
1,991,250	+		MPMX19_01905	0.79	-1.6
1,991,250	+		MPMX19_01905	0.79	+0.9
1,991,250	+		MPMX19_01905	0.79	-2.1
1,991,250	+		MPMX19_01905	0.79	+0.3
1,991,251	-		MPMX19_01905	0.79	-0.6
1,991,251	-		MPMX19_01905	0.79	-0.5
1,991,251	-		MPMX19_01905	0.79	-0.1
1,991,251	-		MPMX19_01905	0.79	-0.1
1,991,251	-		MPMX19_01905	0.79	-0.7
1,991,251	-		MPMX19_01905	0.79	+0.1
1,991,251	-		MPMX19_01905	0.79	+0.9
1,991,251	-		MPMX19_01905	0.79	-0.3
1,991,251	-		MPMX19_01905	0.79	-0.6
1,991,251	-		MPMX19_01905	0.79	+1.5
1,991,251	-		MPMX19_01905	0.79	-0.8
1,991,251	-		MPMX19_01905	0.79	-1.6
1,991,251	-		MPMX19_01905	0.79	+0.2
1,991,251	-		MPMX19_01905	0.79	-0.8
1,991,251	-		MPMX19_01905	0.79	-1.6
1,991,251	-		MPMX19_01905	0.79	-0.8
1,991,251	-		MPMX19_01905	0.79	+0.9
1,991,448	+				+0.6
1,991,448	+				-0.9
1,991,448	+				-0.2
1,991,448	+				-0.8
1,991,448	+				-0.6
1,991,448	+				-2.1
1,991,448	+				-0.8
1,991,448	+				+0.9
1,991,448	+				-1.5
1,991,448	+				+1.5
1,991,448	+				+0.5
1,991,448	+				-0.6
1,991,448	+				+0.0
1,991,448	+				-0.4
1,991,448	+				+0.5
1,991,448	+				-2.5
1,991,448	+				-0.4
1,991,448	+				-0.8
1,991,448	+				+0.3
1,991,448	+				-1.5
1,991,448	+				-0.8
1,991,448	+				-0.2
1,991,448	+				-0.1
1,991,448	+				-0.6
1,991,448	+				-0.2
1,991,448	+				-1.9
1,991,448	+				-0.9
1,991,448	+				+0.2
1,991,448	+				+0.1
1,991,448	+				-1.9
1,991,448	+				-1.7
1,991,448	+				-0.5
1,991,448	+				-1.2
1,991,448	+				-2.2
1,991,448	+				-1.6
1,991,448	+				-0.1
1,991,448	+				+1.0
1,991,448	+				-0.8
1,991,448	+				+0.1
1,991,448	+				-0.1
1,991,448	+				-1.9
1,991,448	+				-2.0
1,991,448	+				+1.2
1,991,448	+				-1.8
1,991,448	+				-0.6
1,991,448	+				-1.8
1,991,448	+				-0.7
1,991,448	+				-0.7
1,991,448	+				+0.1
1,991,448	+				-0.7
1,991,448	+				-1.9
1,991,448	+				-0.2
1,991,448	+				-3.1
1,991,448	+				-0.8
1,991,448	+				-2.4
1,991,448	+				+0.4
1,991,448	+				+0.5
1,991,448	+				+0.0
1,991,448	+				+0.9
1,991,448	+				-1.1
1,991,448	+				-0.0
1,991,448	+				+0.2
1,991,448	+				+0.0
1,991,448	+				+0.2
1,991,448	+				-1.1
1,991,448	+				-1.7
1,991,448	+				-0.9
1,991,449	-				-1.1
1,991,449	-				-0.3
1,991,449	-				-1.6
1,991,449	-				-1.0
1,991,449	-				+0.7
1,991,449	-				-1.9
1,991,449	-				-1.6
1,991,449	-				+0.0
1,991,449	-				-0.5
1,991,449	-				+0.2
1,991,449	-				-0.3
1,991,449	-				-1.0
1,991,449	-				-0.3
1,991,449	-				-0.6
1,991,449	-				-1.1
1,991,449	-				-2.8
1,991,449	-				-0.9
1,991,449	-				-0.5
1,991,449	-				-1.6
1,991,449	-				-0.7
1,991,449	-				-0.1
1,991,449	-				-1.6
1,991,449	-				-0.6
1,991,449	-				-0.8
1,991,449	-				-0.2
1,991,449	-				-0.8
1,991,449	-				+1.3
1,991,449	-				-0.9
1,991,449	-				-0.5
1,991,449	-				+1.1
1,991,449	-				+0.5
1,991,449	-				-0.1
1,991,449	-				-0.3
1,991,449	-				-1.4
1,991,449	-				-1.3
1,991,449	-				-1.2
1,991,449	-				-1.1
1,991,449	-				-0.6
1,991,449	-				-0.5
1,991,449	-				-1.1
1,991,449	-				-1.7
1,991,449	-				-0.3
1,991,449	-				-0.2
1,991,449	-				-0.3
1,991,449	-				+0.3
1,991,449	-				-0.8
1,991,449	-				-0.8
1,991,449	-				-0.6
1,991,449	-				+0.4
1,991,449	-				+0.1
1,991,449	-				-0.1
1,991,449	-				-0.9
1,991,449	-				-2.3
1,991,449	-				-2.6
1,991,449	-				-1.6
1,991,449	-				-0.6
1,991,449	-				-0.3
1,991,513	+				-1.1
1,991,513	+				-1.5
1,991,513	+				-0.4
1,991,513	+				-0.7
1,991,513	+				+0.5
1,991,513	+				-1.5
1,991,513	+				-1.9
1,991,513	+				-2.3
1,991,513	+				-0.5
1,991,513	+				-2.1
1,991,513	+				-0.3
1,991,513	+				-1.8
1,991,514	-				-1.1
1,991,514	-				-1.1
1,991,514	-				+0.6
1,991,514	-				+1.3
1,991,514	-				-2.4
1,991,514	-				+0.3
1,991,514	-				-0.5
1,991,863	+		MPMX19_01906	0.32	+0.8
1,991,863	+		MPMX19_01906	0.32	-0.2
1,991,863	+		MPMX19_01906	0.32	-0.7
1,991,863	+		MPMX19_01906	0.32	+0.4
1,991,863	+		MPMX19_01906	0.32	-2.7
1,991,863	+		MPMX19_01906	0.32	+0.7
1,991,863	+		MPMX19_01906	0.32	+2.1
1,991,863	+		MPMX19_01906	0.32	+0.1
1,991,864	-		MPMX19_01906	0.32	-0.6
1,991,864	-		MPMX19_01906	0.32	+0.4
1,991,864	-		MPMX19_01906	0.32	+1.1
1,991,864	-		MPMX19_01906	0.32	+1.0
1,991,864	-		MPMX19_01906	0.32	-0.8
1,991,864	-		MPMX19_01906	0.32	-1.4
1,991,864	-		MPMX19_01906	0.32	-0.2
1,991,864	-		MPMX19_01906	0.32	-0.8
1,991,864	-		MPMX19_01906	0.32	-1.2
1,991,864	-		MPMX19_01906	0.32	-0.9
1,991,864	-		MPMX19_01906	0.32	-0.9
1,991,864	-		MPMX19_01906	0.32	-0.7
1,991,864	-		MPMX19_01906	0.32	-1.3
1,992,064	+		MPMX19_01906	0.53	-0.2
1,992,064	+		MPMX19_01906	0.53	+0.2
1,992,064	+		MPMX19_01906	0.53	-0.5
1,992,064	+		MPMX19_01906	0.53	+0.7
1,992,064	+		MPMX19_01906	0.53	+1.0
1,992,064	+		MPMX19_01906	0.53	-0.2
1,992,064	+		MPMX19_01906	0.53	-1.9
1,992,064	+		MPMX19_01906	0.53	-0.5
1,992,065	-		MPMX19_01906	0.53	-0.5
1,992,065	-		MPMX19_01906	0.53	-1.5
1,992,065	-		MPMX19_01906	0.53	-0.5
1,992,065	-		MPMX19_01906	0.53	-1.1
1,992,065	-		MPMX19_01906	0.53	-1.1
1,992,106	+		MPMX19_01906	0.57	-1.8
1,992,106	+		MPMX19_01906	0.57	-1.3
1,992,106	+		MPMX19_01906	0.57	+1.1
1,992,106	+		MPMX19_01906	0.57	-1.0
1,992,106	+		MPMX19_01906	0.57	-0.3
1,992,107	-		MPMX19_01906	0.58	-1.4
1,992,107	-		MPMX19_01906	0.58	+0.5
1,992,107	-		MPMX19_01906	0.58	-1.2
1,992,107	-		MPMX19_01906	0.58	-1.2
1,992,107	-		MPMX19_01906	0.58	-1.3
1,992,107	-		MPMX19_01906	0.58	-0.7
1,992,107	-		MPMX19_01906	0.58	+0.6
1,992,563	+				-0.4
1,992,563	+				+0.7
1,992,563	+				-0.5
1,992,563	+				-0.5
1,992,563	+				-0.5
1,992,563	+				-0.8
1,992,563	+				-0.3
1,992,563	+				+0.0
1,992,563	+				-0.1
1,992,563	+				+0.8
1,992,563	+				+0.1
1,992,563	+				+0.1
1,992,563	+				-0.1
1,992,563	+				+0.5
1,992,563	+				-0.8
1,992,563	+				+0.1
1,992,564	-				-1.6
1,992,564	-				+0.4
1,992,564	-				+0.3
1,992,564	-				-0.1
1,992,564	-				-1.5
1,992,564	-				-0.3
1,992,564	-				-0.3
1,992,564	-				+0.2
1,992,564	-				+0.9
1,992,564	-				+1.3
1,992,564	-				-0.1
1,992,564	-				+0.9
1,992,564	-				+0.5
1,992,564	-				-0.6
1,992,698	+		MPMX19_01907	0.18	-0.1
1,992,698	+		MPMX19_01907	0.18	-0.6
1,992,699	-		MPMX19_01907	0.19	-0.3
1,992,699	-		MPMX19_01907	0.19	+0.1
1,992,736	+		MPMX19_01907	0.24	-0.9
1,992,736	+		MPMX19_01907	0.24	-2.2
1,992,736	+		MPMX19_01907	0.24	-0.7
1,992,737	-		MPMX19_01907	0.24	+1.2
1,992,737	-		MPMX19_01907	0.24	+0.6
1,992,737	-		MPMX19_01907	0.24	+0.1
1,992,794	+		MPMX19_01907	0.33	+0.5
1,992,794	+		MPMX19_01907	0.33	+0.2
1,992,794	+		MPMX19_01907	0.33	-0.1
1,992,794	+		MPMX19_01907	0.33	+0.7
1,992,794	+		MPMX19_01907	0.33	+0.3
1,992,794	+		MPMX19_01907	0.33	+0.4
1,992,794	+		MPMX19_01907	0.33	+0.7
1,992,794	+		MPMX19_01907	0.33	+0.1
1,992,795	-		MPMX19_01907	0.33	+0.5
1,992,795	-		MPMX19_01907	0.33	-1.5
1,992,795	-		MPMX19_01907	0.33	+0.0
1,992,795	-		MPMX19_01907	0.33	+0.3
1,992,918	-		MPMX19_01907	0.51	-1.3
1,993,019	+		MPMX19_01907	0.66	-0.5
1,993,019	+		MPMX19_01907	0.66	-1.4
1,993,019	+		MPMX19_01907	0.66	-2.1
1,993,019	+		MPMX19_01907	0.66	-0.7
1,993,019	+		MPMX19_01907	0.66	-1.5
1,993,019	+		MPMX19_01907	0.66	+0.9
1,993,019	+		MPMX19_01907	0.66	+0.3
1,993,019	+		MPMX19_01907	0.66	+0.2
1,993,019	+		MPMX19_01907	0.66	+0.8
1,993,019	+		MPMX19_01907	0.66	-0.8
1,993,019	+		MPMX19_01907	0.66	-0.7
1,993,019	+		MPMX19_01907	0.66	-0.8
1,993,020	-		MPMX19_01907	0.67	-0.5
1,993,020	-		MPMX19_01907	0.67	+1.1
1,993,020	-		MPMX19_01907	0.67	-1.0
1,993,020	-		MPMX19_01907	0.67	-0.6
1,993,020	-		MPMX19_01907	0.67	+0.1
1,993,020	-		MPMX19_01907	0.67	+0.3
1,993,020	-		MPMX19_01907	0.67	+0.9
1,993,020	-		MPMX19_01907	0.67	-0.1
1,993,020	-		MPMX19_01907	0.67	+0.4
1,993,020	-		MPMX19_01907	0.67	-0.2
1,993,020	-		MPMX19_01907	0.67	-1.6
1,993,245	+				-0.1
1,993,245	+				-0.9
1,993,245	+				-0.1