Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01065

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
				remove
1,103,570	+	MPMX19_01064	0.19	+0.5
1,103,570	+	MPMX19_01064	0.19	-0.1
1,103,571	-	MPMX19_01064	0.19	-1.7
1,103,571	-	MPMX19_01064	0.19	-1.8
1,103,571	-	MPMX19_01064	0.19	-1.5
1,103,571	-	MPMX19_01064	0.19	-0.9
1,103,705	+	MPMX19_01064	0.33	-0.6
1,103,705	+	MPMX19_01064	0.33	-0.6
1,103,705	+	MPMX19_01064	0.33	-1.2
1,103,705	+	MPMX19_01064	0.33	-1.8
1,103,705	+	MPMX19_01064	0.33	-1.1
1,103,705	+	MPMX19_01064	0.33	-2.5
1,103,705	+	MPMX19_01064	0.33	-1.5
1,103,706	-	MPMX19_01064	0.33	-0.5
1,103,706	-	MPMX19_01064	0.33	-1.4
1,103,706	-	MPMX19_01064	0.33	-1.7
1,103,706	-	MPMX19_01064	0.33	-0.7
1,103,706	-	MPMX19_01064	0.33	-2.0
1,103,706	-	MPMX19_01064	0.33	+0.2
1,103,706	-	MPMX19_01064	0.33	-0.3
1,103,706	-	MPMX19_01064	0.33	-0.3
1,103,706	-	MPMX19_01064	0.33	+0.1
1,103,858	+	MPMX19_01064	0.48	-1.4
1,103,858	+	MPMX19_01064	0.48	-0.7
1,103,858	+	MPMX19_01064	0.48	+0.9
1,103,858	+	MPMX19_01064	0.48	+0.4
1,103,858	+	MPMX19_01064	0.48	-1.4
1,103,858	+	MPMX19_01064	0.48	-2.2
1,103,858	+	MPMX19_01064	0.48	-0.4
1,103,858	+	MPMX19_01064	0.48	+0.9
1,103,858	+	MPMX19_01064	0.48	+0.7
1,103,858	+	MPMX19_01064	0.48	-1.5
1,103,858	+	MPMX19_01064	0.48	+0.3
1,103,858	+	MPMX19_01064	0.48	-0.7
1,103,858	+	MPMX19_01064	0.48	-1.8
1,103,858	+	MPMX19_01064	0.48	-1.4
1,103,858	+	MPMX19_01064	0.48	+0.0
1,103,858	+	MPMX19_01064	0.48	-1.2
1,103,858	+	MPMX19_01064	0.48	-0.1
1,103,858	+	MPMX19_01064	0.48	-0.4
1,103,858	+	MPMX19_01064	0.48	-1.7
1,103,858	+	MPMX19_01064	0.48	+0.5
1,103,858	+	MPMX19_01064	0.48	-0.5
1,103,858	+	MPMX19_01064	0.48	-0.5
1,103,859	-	MPMX19_01064	0.49	-0.9
1,103,859	-	MPMX19_01064	0.49	-0.5
1,103,859	-	MPMX19_01064	0.49	-1.2
1,103,859	-	MPMX19_01064	0.49	-1.7
1,103,859	-	MPMX19_01064	0.49	-0.6
1,103,859	-	MPMX19_01064	0.49	-0.1
1,103,859	-	MPMX19_01064	0.49	-1.5
1,103,859	-	MPMX19_01064	0.49	-1.6
1,103,859	-	MPMX19_01064	0.49	-1.6
1,103,859	-	MPMX19_01064	0.49	-1.5
1,103,859	-	MPMX19_01064	0.49	-0.8
1,103,859	-	MPMX19_01064	0.49	-1.5
1,103,859	-	MPMX19_01064	0.49	-1.7
1,103,859	-	MPMX19_01064	0.49	-0.7
1,103,859	-	MPMX19_01064	0.49	+0.6
1,103,859	-	MPMX19_01064	0.49	-0.8
1,103,859	-	MPMX19_01064	0.49	-1.4
1,103,859	-	MPMX19_01064	0.49	+0.8
1,103,859	-	MPMX19_01064	0.49	+0.3
1,103,859	-	MPMX19_01064	0.49	+0.2
1,103,859	-	MPMX19_01064	0.49	-2.9
1,103,859	-	MPMX19_01064	0.49	-1.5
1,103,859	-	MPMX19_01064	0.49	+0.3
1,104,156	-	MPMX19_01064	0.79	+0.9
1,104,156	-	MPMX19_01064	0.79	+1.2
1,104,156	-	MPMX19_01064	0.79	-1.0
1,104,399	+			+0.3
1,104,399	+			+0.3
1,104,399	+			+0.0
1,104,453	-			-1.2
1,104,453	-			+0.3
1,104,509	+			-1.4
1,104,509	+			+0.1
1,104,509	+			-0.3
1,104,509	+			-1.6
1,104,509	+			+0.1
1,104,509	+			+0.4
1,104,509	+			-0.9
1,104,509	+			+0.1
1,104,509	+			-0.0
1,104,509	+			-1.5
1,104,509	+			+0.1
1,104,509	+			-0.0
1,104,509	+			+2.2
1,104,509	+			-0.3
1,104,509	+			-1.1
1,104,509	+			-0.7
1,104,509	+			-0.0
1,104,509	+			-1.5
1,104,509	+			+0.2
1,104,509	+			-2.2
1,104,509	+			-2.8
1,104,509	+			+0.0
1,104,509	+			-0.7
1,104,509	+			-2.1
1,104,509	+			-0.7
1,104,510	-			-0.5
1,104,510	-			+0.5
1,104,510	-			+0.1
1,104,510	-			+0.6
1,104,510	-			+1.6
1,104,510	-			-0.8
1,104,510	-			+0.0
1,104,510	-			-0.4
1,104,510	-			-1.1
1,104,510	-			+1.5
1,104,510	-			-0.7
1,104,510	-			+0.6
1,104,510	-			-0.9
1,104,510	-			-0.1
1,104,510	-			-1.5
1,104,510	-			-0.5
1,104,510	-			-2.2
1,104,510	-			-0.9
1,104,510	-			-0.0
1,104,510	-			-0.8
1,104,510	-			+0.3
1,104,510	-			-0.1
1,104,510	-			+1.5
1,104,510	-			+1.1
1,104,511	+			+0.1
1,104,511	+			+1.7
1,104,511	+			+0.1
1,104,511	+			+0.2
1,104,511	+			-1.9
1,104,511	+			-1.0
1,104,511	+			-1.3
1,104,511	+			-1.7
1,104,512	-			-0.6
1,104,512	-			-0.9
1,104,512	-			+0.5
1,104,512	-			-0.1
1,104,512	-			-0.3
1,104,512	-			-0.8
1,104,512	-			+0.1
1,104,512	-			-2.5
1,104,512	-			+0.3
1,104,512	-			+0.1
1,104,683	+	MPMX19_01065	0.38	-0.1
1,104,683	+	MPMX19_01065	0.38	-0.3
1,104,683	+	MPMX19_01065	0.38	-0.5
1,104,683	+	MPMX19_01065	0.38	-1.1
1,104,683	+	MPMX19_01065	0.38	-1.5
1,104,683	+	MPMX19_01065	0.38	-1.1
1,104,683	+	MPMX19_01065	0.38	-0.5
1,104,683	+	MPMX19_01065	0.38	-0.3
1,104,683	+	MPMX19_01065	0.38	+0.6
1,104,683	+	MPMX19_01065	0.38	+0.3
1,104,683	+	MPMX19_01065	0.38	-0.7
1,104,683	+	MPMX19_01065	0.38	+0.1
1,104,684	-	MPMX19_01065	0.38	-0.4
1,104,684	-	MPMX19_01065	0.38	+0.0
1,104,684	-	MPMX19_01065	0.38	-2.5
1,104,684	-	MPMX19_01065	0.38	+0.8
1,104,684	-	MPMX19_01065	0.38	-1.4
1,104,684	-	MPMX19_01065	0.38	-1.4
1,104,779	+	MPMX19_01065	0.63	-0.9
1,104,779	+	MPMX19_01065	0.63	-1.3
1,104,779	+	MPMX19_01065	0.63	-1.0
1,104,779	+	MPMX19_01065	0.63	-0.9
1,104,779	+	MPMX19_01065	0.63	+0.5
1,104,779	+	MPMX19_01065	0.63	-0.7
1,104,779	+	MPMX19_01065	0.63	-0.9
1,104,780	-	MPMX19_01065	0.63	+0.5
1,104,780	-	MPMX19_01065	0.63	-2.6
1,104,780	-	MPMX19_01065	0.63	-0.2
1,104,780	-	MPMX19_01065	0.63	-2.5
1,104,780	-	MPMX19_01065	0.63	-1.5
1,104,780	-	MPMX19_01065	0.63	-1.9
1,104,780	-	MPMX19_01065	0.63	-1.7
1,104,780	-	MPMX19_01065	0.63	+1.5
1,104,802	+	MPMX19_01065	0.69	-0.4
1,104,802	+	MPMX19_01065	0.69	+0.1
1,104,802	+	MPMX19_01065	0.69	-0.1
1,104,802	+	MPMX19_01065	0.69	-0.3
1,104,802	+	MPMX19_01065	0.69	-0.3
1,104,802	+	MPMX19_01065	0.69	-1.2
1,104,802	+	MPMX19_01065	0.69	-2.1
1,104,802	+	MPMX19_01065	0.69	+1.3
1,104,802	+	MPMX19_01065	0.69	-0.1
1,104,802	+	MPMX19_01065	0.69	-0.2
1,104,802	+	MPMX19_01065	0.69	-0.3
1,104,802	+	MPMX19_01065	0.69	-1.0
1,104,802	+	MPMX19_01065	0.69	-0.4
1,104,802	+	MPMX19_01065	0.69	-1.0
1,104,802	+	MPMX19_01065	0.69	-0.1
1,104,802	+	MPMX19_01065	0.69	-1.4
1,104,802	+	MPMX19_01065	0.69	-0.5
1,104,803	-	MPMX19_01065	0.69	-1.5
1,104,803	-	MPMX19_01065	0.69	+0.2
1,104,803	-	MPMX19_01065	0.69	-2.2
1,104,803	-	MPMX19_01065	0.69	-1.5
1,104,803	-	MPMX19_01065	0.69	-0.5
1,104,803	-	MPMX19_01065	0.69	+1.1
1,104,803	-	MPMX19_01065	0.69	-0.0
1,104,803	-	MPMX19_01065	0.69	+1.1
1,104,803	-	MPMX19_01065	0.69	-1.5
1,104,803	-	MPMX19_01065	0.69	-0.4
1,104,803	-	MPMX19_01065	0.69	-2.5
1,104,803	-	MPMX19_01065	0.69	-1.8
1,104,803	-	MPMX19_01065	0.69	-0.8
1,104,803	-	MPMX19_01065	0.69	+0.8
1,104,803	-	MPMX19_01065	0.69	+0.2
1,104,803	-	MPMX19_01065	0.69	-0.5
1,104,803	-	MPMX19_01065	0.69	+1.6
1,104,917	+			-1.2
1,104,960	+			-1.5
1,104,983	+			-1.4
1,104,983	+			+2.0
1,104,983	+			-1.5
1,104,983	+			-1.7
1,104,983	+			-1.1
1,104,983	+			+1.0
1,104,983	+			+0.5
1,104,983	+			-1.5
1,104,983	+			-1.1
1,104,983	+			-1.5
1,104,983	+			-0.3
1,104,983	+			-0.3
1,104,983	+			+0.3
1,104,983	+			-1.5
1,104,983	+			+0.5
1,104,984	-			-2.1
1,104,984	-			-0.6
1,104,984	-			-0.5
1,104,984	-			-1.4
1,104,984	-			-0.4
1,104,984	-			-1.7
1,104,984	-			-0.0
1,104,984	-			-1.0
1,104,984	-			+0.2
1,104,984	-			-1.1
1,104,984	-			+0.0
1,104,984	-			-0.9
1,104,984	-			-2.1
1,104,984	-			-0.0
1,104,984	-			+0.7
1,105,092	-	MPMX19_01066	0.51	-1.7
1,105,161	+			-2.6
1,105,161	+			-1.0
1,105,161	+			-2.0
1,105,161	+			-0.4
1,105,161	+			-0.5
1,105,162	-			-1.1
1,105,162	-			-0.3
1,105,162	-			-0.4
1,105,162	-			-1.0
1,105,162	-			+1.0
1,105,162	-			-2.1
1,105,162	-			+1.2
1,105,162	-			+0.5
1,105,162	-			+0.0
1,105,162	-			+0.7
1,105,247	+			-1.4
1,105,247	+			-1.9
1,105,247	+			-2.4
1,105,248	-			-0.1
1,105,248	-			-0.3
1,105,248	-			-0.5
1,105,248	-			-0.5
1,105,248	-			-2.3
1,105,248	-			-0.7
1,105,338	+			+0.3
1,105,338	+			-2.1
1,105,572	+	MPMX19_01067	0.47	+0.1
1,105,573	-	MPMX19_01067	0.47	+0.1

Or see this region's nucleotide sequence