Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF984 and GFF985 are separated by 39 nucleotides GFF985 and GFF986 are separated by 7 nucleotides GFF986 and GFF987 are separated by 127 nucleotides GFF987 and GFF988 are separated by 6 nucleotides
GFF984 - putative protein YcjX, at 1,064,048 to 1,065,514
GFF984
GFF985 - hypothetical protein, at 1,065,554 to 1,066,192
GFF985
GFF986 - hypothetical protein, at 1,066,200 to 1,067,123
GFF986
GFF987 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 1,067,251 to 1,068,063
GFF987
GFF988 - hypothetical protein, at 1,068,070 to 1,069,197
GFF988
Position (kb) 1066
1067
1068 Strain fitness (log2 ratio) -1
0
1 at 1065.270 kb on + strand, within GFF984 at 1065.270 kb on + strand, within GFF984 at 1065.270 kb on + strand, within GFF984 at 1065.270 kb on + strand, within GFF984 at 1065.271 kb on - strand, within GFF984 at 1065.271 kb on - strand, within GFF984 at 1065.378 kb on + strand at 1065.423 kb on + strand at 1067.208 kb on - strand at 1067.250 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 1,065,270 + GFF984 0.83 +0.9 1,065,270 + GFF984 0.83 +1.1 1,065,270 + GFF984 0.83 +1.6 1,065,270 + GFF984 0.83 +0.5 1,065,271 - GFF984 0.83 -0.7 1,065,271 - GFF984 0.83 +0.4 1,065,378 + -1.2 1,065,423 + -0.4 1,067,208 - -0.6 1,067,250 - +0.7
Or see this region's nucleotide sequence