Strain Fitness in Xanthobacter sp. DMC5 around GFF930

Experiment: Methanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF929 and GFF930 overlap by 8 nucleotidesGFF930 and GFF931 are separated by 58 nucleotidesGFF931 and GFF932 are separated by 6 nucleotides GFF929 - Aspartate carbamoyltransferase, at 1,000,215 to 1,001,162 GFF929 GFF930 - Dihydroorotase, at 1,001,155 to 1,002,486 GFF930 GFF931 - Glycerol-3-phosphate acyltransferase, at 1,002,545 to 1,003,150 GFF931 GFF932 - hypothetical protein, at 1,003,157 to 1,004,305 GFF932 Position (kb) 1001 1002 1003Strain fitness (log2 ratio) -2 -1 0 1at 1002.479 kb on - strandat 1002.553 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Methanol (C)
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1,002,479 - -1.8
1,002,553 + -0.5

Or see this region's nucleotide sequence